Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0112
(376 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024762-3|AAO91689.2| 133|Caenorhabditis elegans Vacuolar h at... 117 2e-27
AC024762-2|AAF59474.3| 384|Caenorhabditis elegans Vacuolar h at... 117 2e-27
AB009567-1|BAA75067.1| 384|Caenorhabditis elegans Vha11 protein... 117 2e-27
Z50756-3|CAI79214.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.088
Z81575-7|CAB04638.1| 367|Caenorhabditis elegans Hypothetical pr... 28 1.9
Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z82052-1|CAB04823.1| 300|Caenorhabditis elegans Hypothetical pr... 27 4.4
AF040647-6|AAR30205.3| 436|Caenorhabditis elegans Hypothetical ... 27 4.4
Z81546-10|CAH10812.1| 674|Caenorhabditis elegans Hypothetical p... 26 7.6
>AC024762-3|AAO91689.2| 133|Caenorhabditis elegans Vacuolar h
atpase protein 11, isoformb protein.
Length = 133
Score = 117 bits (282), Expect = 2e-27
Identities = 56/92 (60%), Positives = 65/92 (70%)
Frame = +2
Query: 101 EYWVISAPGDKTCQQTWDTLNNATKSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGKLDT 280
EYW+IS PG+K WD LN +T GN S N K+ IPDLKVGTLDQLVGLSDDL KLDT
Sbjct: 8 EYWLISVPGEKGANDAWDKLNRST--GNTSTNSKYLIPDLKVGTLDQLVGLSDDLSKLDT 65
Query: 281 FVEGVTRKVAQYLGEVLEDQRDKLHENLMANN 376
E V RK+ QY EVLE+ + K+ ENL+ N
Sbjct: 66 SAEAVIRKLVQYFTEVLEEDKSKIAENLVIGN 97
>AC024762-2|AAF59474.3| 384|Caenorhabditis elegans Vacuolar h
atpase protein 11, isoforma protein.
Length = 384
Score = 117 bits (282), Expect = 2e-27
Identities = 56/92 (60%), Positives = 65/92 (70%)
Frame = +2
Query: 101 EYWVISAPGDKTCQQTWDTLNNATKSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGKLDT 280
EYW+IS PG+K WD LN +T GN S N K+ IPDLKVGTLDQLVGLSDDL KLDT
Sbjct: 8 EYWLISVPGEKGANDAWDKLNRST--GNTSTNSKYLIPDLKVGTLDQLVGLSDDLSKLDT 65
Query: 281 FVEGVTRKVAQYLGEVLEDQRDKLHENLMANN 376
E V RK+ QY EVLE+ + K+ ENL+ N
Sbjct: 66 SAEAVIRKLVQYFTEVLEEDKSKIAENLVIGN 97
>AB009567-1|BAA75067.1| 384|Caenorhabditis elegans Vha11 protein
protein.
Length = 384
Score = 117 bits (282), Expect = 2e-27
Identities = 56/92 (60%), Positives = 65/92 (70%)
Frame = +2
Query: 101 EYWVISAPGDKTCQQTWDTLNNATKSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGKLDT 280
EYW+IS PG+K WD LN +T GN S N K+ IPDLKVGTLDQLVGLSDDL KLDT
Sbjct: 8 EYWLISVPGEKGANDAWDKLNRST--GNTSTNSKYLIPDLKVGTLDQLVGLSDDLSKLDT 65
Query: 281 FVEGVTRKVAQYLGEVLEDQRDKLHENLMANN 376
E V RK+ QY EVLE+ + K+ ENL+ N
Sbjct: 66 SAEAVIRKLVQYFTEVLEEDKSKIAENLVIGN 97
>Z50756-3|CAI79214.1| 305|Caenorhabditis elegans Hypothetical
protein T08D10.4 protein.
Length = 305
Score = 32.7 bits (71), Expect = 0.088
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -1
Query: 145 LLTGLVARGTDHPVFSHFHHKNLKINAVYNK-LSETANNFGETTRPSC 5
+LT + + + V HFH K+LKI + NK + E N+ T+ SC
Sbjct: 93 VLTSISSDLASNNVTEHFHDKSLKIEQMKNKTIRENDNSHNNQTQTSC 140
>Z81575-7|CAB04638.1| 367|Caenorhabditis elegans Hypothetical
protein R08H2.8 protein.
Length = 367
Score = 28.3 bits (60), Expect = 1.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 224 VGTLDQLVGLSDDLGKLDTFVEGVTR 301
VG D + GL GKL+ F+ GVT+
Sbjct: 161 VGQYDYITGLEGSSGKLNVFMGGVTK 186
>Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical
protein M162.7 protein.
Length = 690
Score = 27.1 bits (57), Expect = 4.4
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 209 IPDLKVGTLDQLVGLSDDLGKLDTFVEGVT 298
+ D+ + + +L+GL D K DTF+ +T
Sbjct: 101 LKDISMESSKELIGLGSDAFKYDTFIHNLT 130
>Z82052-1|CAB04823.1| 300|Caenorhabditis elegans Hypothetical
protein T25E12.5 protein.
Length = 300
Score = 27.1 bits (57), Expect = 4.4
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = +2
Query: 95 MTEYWVISAPGDKTCQQTWDTLNNATKSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGKL 274
MTE W+ A D+ Q LN+ SG + ++ ++LV D++ +
Sbjct: 1 MTEAWITLATNDRYAQGALTLLNSLHASGTTRRIHCLITNEISNSVREKLVNKFDEVTVV 60
Query: 275 DTF 283
D F
Sbjct: 61 DIF 63
>AF040647-6|AAR30205.3| 436|Caenorhabditis elegans Hypothetical
protein F54D12.7 protein.
Length = 436
Score = 27.1 bits (57), Expect = 4.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 364 QVFMELIALIFKYLSKVLG 308
Q+F E I L+F+ L+K+LG
Sbjct: 333 QIFWEFIGLLFRTLTKILG 351
>Z81546-10|CAH10812.1| 674|Caenorhabditis elegans Hypothetical
protein F53A2.8c protein.
Length = 674
Score = 26.2 bits (55), Expect = 7.6
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 83 LVVKMTEYWVISA--PGDKTCQQTWDTLNNATKSGNLS 190
LV++ + VI+ DK+CQ ++TL A K N++
Sbjct: 70 LVIRCKHFQVITLLISRDKSCQDLYETLQRAAKPVNVT 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,949,091
Number of Sequences: 27780
Number of extensions: 181731
Number of successful extensions: 551
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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