Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0112
         (376 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    27   0.072
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   2.1  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   2.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   2.7  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   6.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   6.3  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   6.3  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    21   6.3  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    20   8.3  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    20   8.3  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 27.1 bits (57), Expect = 0.072
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = -1

Query: 247 HQLIQSSHLKVRNREFIVDTEVA*FGGIVQGIPSLLTGLV--ARGTDHPVFSHFHHKNLK 74
           H+ ++ S+ ++R   FI + E     G+     S   G V    G    V  HF+HK L+
Sbjct: 104 HEYLKFSYPRMRAPSFICENETR--QGLTLHYRSKRRGFVYYTMGQIREVARHFYHKELQ 161

Query: 73  INAVYNKL 50
           I  V  ++
Sbjct: 162 IELVREEI 169


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -3

Query: 311 GLPSWSHLRRKCQACPDHLTAPPTDPKFP 225
           G+P   +L +  Q   DHL     D  FP
Sbjct: 109 GVPQLGNLTKHLQVFRDHLINQIPDKSFP 137


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 210 FLTLRWELWISWWGCQMIWASLTLSS 287
           FLT R +LWISW     ++  L L +
Sbjct: 381 FLT-RGDLWISWEEGMKVFDELLLDA 405


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 118 CPWRQDLSADLGY 156
           CPW  +L+ D GY
Sbjct: 235 CPWICELTNDAGY 247


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = -1

Query: 100 SHFHHKNLKIN-AVYNKLSETANNFGE 23
           S  HH N KIN  V++  S ++   GE
Sbjct: 398 SDLHHPNCKINRKVHHTTSSSSAAGGE 424


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = -1

Query: 112 HPVFSHFHHKNLKINAVYNKLSETANNFGETTRPSC 5
           HP +      + +IN +    +E    FG+   P+C
Sbjct: 242 HPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPAC 277


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -3

Query: 293 HLRRKCQAC 267
           ++RRKCQ C
Sbjct: 234 YMRRKCQEC 242


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -3

Query: 293 HLRRKCQAC 267
           ++RRKCQ C
Sbjct: 31  YMRRKCQEC 39


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +1

Query: 148 LGYPEQCHQIRQPQCQL*IP 207
           LG P +  +++ P C++  P
Sbjct: 301 LGIPSEARELQLPGCEVLCP 320


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +1

Query: 148 LGYPEQCHQIRQPQCQL*IP 207
           LG P +  +++ P C++  P
Sbjct: 316 LGIPSEARELQLPGCEVLCP 335


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,793
Number of Sequences: 438
Number of extensions: 2256
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9052365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)