Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0110
(637 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20238| Best HMM Match : Toxin_8 (HMM E-Value=0.66) 64 7e-11
SB_41385| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_4969| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-08) 34 0.11
SB_19988| Best HMM Match : Exo_endo_phos (HMM E-Value=3.1) 33 0.15
SB_36712| Best HMM Match : Adeno_PIX (HMM E-Value=4.8) 33 0.15
SB_50700| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_46977| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.9e-09) 30 1.8
SB_52003| Best HMM Match : BTB (HMM E-Value=1e-16) 30 1.8
SB_36316| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.5e-11) 30 1.8
SB_40551| Best HMM Match : Extensin_2 (HMM E-Value=0.076) 29 2.4
SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13) 29 4.2
SB_35067| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_40529| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_35718| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.8e-09) 28 5.5
SB_50088| Best HMM Match : RanGAP1_C (HMM E-Value=0.001) 28 7.3
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 28 7.3
SB_28448| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_58353| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_10088| Best HMM Match : VWA (HMM E-Value=0) 27 9.7
>SB_20238| Best HMM Match : Toxin_8 (HMM E-Value=0.66)
Length = 491
Score = 64.5 bits (150), Expect = 7e-11
Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 9/109 (8%)
Frame = +2
Query: 56 EPVEFFQPELPILNRDNIGVIVKLSPKELPG-----SSIVVATTHLLYNPKRTDVRLAQI 220
+ VEF + ++ +++RDN+ +IV L P+ G +++ VA THLL+N KR D++L Q+
Sbjct: 32 QEVEFCRKDILVMDRDNVALIVVLRPRYENGKTCNHTALCVANTHLLFNKKRGDIKLLQL 91
Query: 221 KILLAEI----DRFAYFNNGRESGHFPVILTGDFNSTPESAVINLLDRG 355
L AEI + R VIL GDFN TP + +L+ +G
Sbjct: 92 SSLFAEIQQVTSKVCSSEGSRGIKQCGVILCGDFNMTPWCPLYSLVVQG 140
>SB_41385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 515
Score = 55.2 bits (127), Expect = 4e-08
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 17/108 (15%)
Frame = +2
Query: 89 ILNRDNIGVIVKLSPKELP------GSSIVVATTHLLYNPKRTDVRLAQIKILLAEIDRF 250
++ +DNIG+ V L K+ G ++V+ H+ ++P+ DV+L Q +L+ E+
Sbjct: 278 VMTKDNIGIAVLLELKDTGYIGYNGGQQVLVSNAHIHWDPEFRDVKLIQTVLLMHELQMI 337
Query: 251 ------AYFNNGRESG-----HFPVILTGDFNSTPESAVINLLDRGRV 361
+ +G ++G P++L GD NS P S VI LD GR+
Sbjct: 338 LKQYIPGFHPHGGKNGTTPSKSIPIVLCGDLNSLPNSGVIEFLDNGRI 385
>SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1792
Score = 45.2 bits (102), Expect = 5e-05
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = +2
Query: 89 ILNRDNIGVIVKLSPKELPGSS--IVVATTHLLYNPKRTDVRLAQIKILLAEIDRFAY-F 259
++ R+ I + L K +S I V THL Y P +R+ Q I+L +
Sbjct: 216 LIKRNAIAQVAVLKCKGNNDNSPLICVVNTHLYYRPHSPHIRMLQAAIILNHTKAVVHEL 275
Query: 260 NNGRESG-HFPVILTGDFNSTPESAVINLLDRGRVRASSLRDNSDW 394
+ R+ V+ GDFNSTP + + LL +G V R + DW
Sbjct: 276 TSERDDNIDVAVLFCGDFNSTPHTGLFQLLTKGHV----ARTHHDW 317
>SB_4969| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.5e-08)
Length = 367
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +2
Query: 212 AQIKILLAEIDRFAYFNNGRESGHFPVILTGDFNSTPESAVINLLDRGRVRASSLR 379
+Q+K +++ ID+F +E PVILTGDFNS PE+ + +G ASS +
Sbjct: 1 SQVKKVVSGIDKFL---KQKELHSIPVILTGDFNS-PETNPVYQFVKGSGFASSYK 52
>SB_19988| Best HMM Match : Exo_endo_phos (HMM E-Value=3.1)
Length = 195
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 212 AQIKILLAEIDRFAYFNNGRESGHFPVILTGDFNSTPESAVINLLDRGRVRASSLR 379
AQI + +F P +L GDFN P+ + NLL+ G + +LR
Sbjct: 113 AQILCAAQAMLKFVQSLQSTTDDRVPYVLCGDFNIEPQYPIYNLLEEGTLNKDTLR 168
>SB_36712| Best HMM Match : Adeno_PIX (HMM E-Value=4.8)
Length = 320
Score = 33.5 bits (73), Expect = 0.15
Identities = 26/102 (25%), Positives = 42/102 (41%)
Frame = -2
Query: 429 KCWQLSVTPIRFQSELSRSELALTRPLSNKFITALSGVELKSPVSITGKWPDSLPLLK*A 250
KC QL + ++EL RS + + PLS+ F+T L + K I W + L
Sbjct: 188 KCAQLEKELGKMRAELERSSMEIDAPLSDDFLTILDSADQKMTPFIKLFWQEQKKLFSKT 247
Query: 249 NLSISASNILICASRTSVLFGL*SKWVVATTMEDPGNSFGDN 124
+ + ++I + + W +T PGN F N
Sbjct: 248 STGVRYHPMIIRFLFLTDVLSYLRGW-KESTQNRPGN-FSQN 287
>SB_50700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = +2
Query: 152 SIVVATTHLLYNPKRTDVRLAQIKILLAEIDRFAYFNNGRESGHFPVILTGDFNSTPESA 331
S+ THL P D+R AQ K +LA + F E+ V++ GDFN+ P
Sbjct: 183 SLYCCGTHLKAKPAFQDLRSAQGKSVLAFLKDF------MENEQAEVLVCGDFNAEPTEP 236
Query: 332 VINLLDRG 355
V +++ G
Sbjct: 237 VYQVMEDG 244
>SB_46977| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.9e-09)
Length = 549
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +2
Query: 434 VYLNRQQGCPSNFNKIKIHNSKYAFDSANADESDYWNDAHNRMFNSDVIGHSLNLISVYN 613
+Y+ + SN+N KI + FDSA + Y +D+ N+ F + IG S + S
Sbjct: 228 LYIQHEGSNVSNWNVEKIVYNDQKFDSAEDLLNAYKSDSLNKSFFAAPIGESKDFASYKR 287
Query: 614 KFKADGQM 637
+ K Q+
Sbjct: 288 RGKPKPQV 295
>SB_52003| Best HMM Match : BTB (HMM E-Value=1e-16)
Length = 501
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 92 LNRDNIGVIVKLSPKELPGSSIVVATTHLLYN-PKRTDVRLAQIKILLAEIDRFAYFNNG 268
L R VI K + + S + T LLYN +R D+R+ ++ + A +DR+A G
Sbjct: 214 LQRQCWEVICKKTADVVASDSFLNVTQQLLYNILRRNDLRIRELALFKA-VDRWAEHQAG 272
Query: 269 RE 274
R+
Sbjct: 273 RQ 274
>SB_36316| Best HMM Match : Cu_amine_oxid (HMM E-Value=3.5e-11)
Length = 632
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +2
Query: 434 VYLNRQQGCPSNFNKIKIHNSKYAFDSANADESDYWNDAHNRMFNSDVIGHSLNLISVYN 613
+Y+ + SN+N KI + FDSA + Y +D+ N+ F + IG S + S
Sbjct: 354 LYIQHEGSNVSNWNVEKIVYNDQKFDSAEDLLNAYKSDSLNKSFFAAPIGESKDFASYKR 413
Query: 614 KFKADGQM 637
+ K Q+
Sbjct: 414 RGKPKPQV 421
>SB_40551| Best HMM Match : Extensin_2 (HMM E-Value=0.076)
Length = 1269
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +2
Query: 470 FNKIKIHNSKYAFDSANADESDYWNDAHNRMFNSDVIGHSLNLISVYNKFKAD 628
+N I++ F+ N + + D+ N D++ + N+ SVYN F D
Sbjct: 877 YNPFNINSVYNPFNKDNRVHNPFNKDSVYNPVNKDIVYNPFNINSVYNPFNKD 929
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 563 FNSDVIGHSLNLISVYNKFKAD 628
FN D++ + +N+ SVYN F D
Sbjct: 817 FNKDIVYNPVNINSVYNPFNKD 838
>SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13)
Length = 3035
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +2
Query: 386 SDWKRIGVTDNCQ---HLAVYLNRQQGCPSNFNKIKIHNSKYAFDSANAD 526
S+WKR +CQ + + + + GCP N +KI + F SA A+
Sbjct: 1405 SEWKRTHAHLSCQEEYNAVMEAHNELGCPPNNSKIAEIAQRAGFSSATAN 1454
>SB_35067| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 612
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -2
Query: 429 KCWQLSVTPIRFQSELSRSELALTRPLSNKFITALSGVELK 307
KC QL + ++EL RS + + LS+ F+T L + K
Sbjct: 72 KCAQLEKELGKMRAELERSSMQIDATLSDDFLTILDSADQK 112
>SB_40529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1437
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Frame = +2
Query: 185 NPKRTDVRLAQIKILLAEID-RFAYFNNGRE-SGHFPVILTGDFNSTPESAVIN---LLD 349
+P+ TD L +I ++ D F NNG + + + P + T + + + N L+D
Sbjct: 676 SPEETDENLPEINTIINTSDSNFGNQNNGTDVTINVPFLTTDNLMLHGQISGHNVDLLVD 735
Query: 350 RGRVRASSLRDNSDWKRIGVTDNCQ 424
G A S +S W+R+ T+N Q
Sbjct: 736 TGA--AISCISSSTWRRLNTTNNLQ 758
>SB_35718| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.8e-09)
Length = 305
Score = 28.3 bits (60), Expect = 5.5
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +2
Query: 326 SAVINLLDRGRVRASSLRDNSDWKRIGVTDNCQHLAVYLNRQQGCPSNFNKIKIHNSKYA 505
S VI L+DR + R SS + + I + D A+Y+ G P F +N Y
Sbjct: 16 SHVIRLIDREQWRTSS----NTCESILLIDPT---AIYVGELNGKPIGFVVFMKYNDAYG 68
Query: 506 FDSANADESDYWNDAHNR-MFNSDV--IGHSLNL 598
F S E+DY + + +F++ + I H N+
Sbjct: 69 FVSVFIIEADYRGHGYGKQLFDAAISAISHPQNM 102
>SB_50088| Best HMM Match : RanGAP1_C (HMM E-Value=0.001)
Length = 636
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +2
Query: 320 PESAVINLLDRGRVRASSLRDNSDWKRIGVTDNCQHLAV--YLNRQQGCPSNFN 475
PE LL R + + + W+ I V ++C L + Y+ ++ P +F+
Sbjct: 299 PEDIACALLGRVNLLETKMTKRIPWENISVEEHCSFLLILHYIAKKDSSPPSFS 352
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 27.9 bits (59), Expect = 7.3
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +2
Query: 509 DSANADE---SDYWNDAHNRMFNSDVIGHSLNLISVYN 613
DS+N+DE S W HN NSD GH + YN
Sbjct: 580 DSSNSDEYGQSITWKVIHNDSSNSDEYGHYITWKVNYN 617
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +2
Query: 509 DSANADE-SDY--WNDAHNRMFNSDVIGHSLNLISVYN 613
DS+N+DE Y W HN NSD G + +YN
Sbjct: 542 DSSNSDEYGQYITWKVIHNDSSNSDEYGQYITRKGIYN 579
>SB_28448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -2
Query: 180 SKWVVAT---TMEDPGNSFGDNFTITPILSRLRIGSSGWKNSTGSP 52
++W A+ T+EDPG+ + F I P + +LR G S T SP
Sbjct: 230 TQWPTASFKWTLEDPGSVNVNPFEIEPAMFQLRKGESTTIKITFSP 275
>SB_58353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +2
Query: 458 CPSNFNKIKIHN---SKYAFDSANADE--SDYWNDAHNRMFNSDVIGHSLNLISVYNKFK 622
C + FNK ++N ++ N D + + D+ FN D + + +N SVYN
Sbjct: 4 CTTRFNKDSVYNPVNKDSVYNPVNKDSVYNPFNKDSVYNPFNKDSVYNPVNKDSVYNPVN 63
Query: 623 AD 628
D
Sbjct: 64 KD 65
>SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2641
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -2
Query: 147 PGNSFGDNFTITPILSRLRIGSSGWKNSTGSPSF 46
PG++ GD + I+P L+I + + + +PSF
Sbjct: 1338 PGHAQGDTYRISPYYITLKISNRAGRKTVIAPSF 1371
>SB_10088| Best HMM Match : VWA (HMM E-Value=0)
Length = 307
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 175 VGCGNDYGRPGQFLRRQFYNHTDII 101
VGC +D RP + LR ++NH + I
Sbjct: 26 VGCYSDEDRPNRALRDLYHNHRNYI 50
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,974,662
Number of Sequences: 59808
Number of extensions: 407201
Number of successful extensions: 1079
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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