Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0110
         (637 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    24   3.5  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   4.6  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   4.6  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   8.1  

>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +2

Query: 440 LNRQQGCPSNFNKIKIHNSKYAFDSANADESDYW 541
           LNRQ   P   + I + N+ Y      AD   YW
Sbjct: 676 LNRQFNLPPLKDTIAVPNNGYVVLRFRADNPGYW 709


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 212 AQIKILLAEIDRFAYFNNGRESGHFPVILTGDFNSTPES 328
           A  ++ +AE + F        S H  V+L GDFN+  E+
Sbjct: 90  ASPRMTVAEFEEFLNAVEIEVSAHPNVVLGGDFNAWHEA 128


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 278 GHFPVILTGDFNS 316
           GH P+++ GDFN+
Sbjct: 109 GHRPLVIAGDFNA 121


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 22/73 (30%), Positives = 32/73 (43%)
 Frame = +2

Query: 209 LAQIKILLAEIDRFAYFNNGRESGHFPVILTGDFNSTPESAVINLLDRGRVRASSLRDNS 388
           + Q  I+L E   F      RE G       G   S+  SA +N +D+   RAS  RD  
Sbjct: 145 IRQRAIILPEELEFIKLEVRREFGEEEA---GWRESSRISARLNTIDQNTSRASEDRDLD 201

Query: 389 DWKRIGVTDNCQH 427
           +    G++ + QH
Sbjct: 202 EPTAPGLSVDIQH 214


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,860
Number of Sequences: 2352
Number of extensions: 13341
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)