Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0110
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067946-1|AAC17686.3|  275|Caenorhabditis elegans Hypothetical ...    60   1e-09
Z68753-6|CAD45610.1|  597|Caenorhabditis elegans Hypothetical pr...    51   6e-07
Z68753-5|CAB54512.2|  613|Caenorhabditis elegans Hypothetical pr...    51   6e-07
Z68753-4|CAB54511.2|  606|Caenorhabditis elegans Hypothetical pr...    51   6e-07
AY043268-1|AAK85706.1|  606|Caenorhabditis elegans CCR4 protein.       51   6e-07
Z92809-2|CAB07271.1|  628|Caenorhabditis elegans Hypothetical pr...    40   0.001
U97009-13|AAZ94736.1|  456|Caenorhabditis elegans Udp-glucuronos...    30   1.2  
Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical pr...    27   8.5  
AF099918-5|AAK29841.2|  391|Caenorhabditis elegans Hypothetical ...    27   8.5  

>AF067946-1|AAC17686.3|  275|Caenorhabditis elegans Hypothetical
           protein W02G9.5 protein.
          Length = 275

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 39/101 (38%), Positives = 54/101 (53%)
 Frame = +2

Query: 56  EPVEFFQPELPILNRDNIGVIVKLSPKELPGSSIVVATTHLLYNPKRTDVRLAQIKILLA 235
           + V +F  +  I NR+NI  IV L  + +    I+VA THLL+N +R DV+LAQ+ IL A
Sbjct: 177 QEVNYFISDTAISNRENIAQIVALRCR-ITKELILVANTHLLFNEERGDVKLAQLAILFA 235

Query: 236 EIDRFAYFNNGRESGHFPVILTGDFNSTPESAVINLLDRGR 358
            I +             PV + GDFN  P S V + +  GR
Sbjct: 236 SIHK---MREDFAPMVPPVFVMGDFNIEPNSKVYDFIVDGR 273


>Z68753-6|CAD45610.1|  597|Caenorhabditis elegans Hypothetical
           protein ZC518.3c protein.
          Length = 597

 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
 Frame = +2

Query: 146 GSSIVVATTHLLYNPKRTDVRLAQIKILLAEIDRFAYFNNGR---ESGHFPVILTGDFNS 316
           G+ +VVAT H+ ++P+  DV+L Q  +L  E+ R     + +        PV++ GDFNS
Sbjct: 379 GNPLVVATAHIHWDPEFCDVKLVQSMMLTHEVSRVLEEVSKKYQITQQQVPVLICGDFNS 438

Query: 317 TPESAVINLLDRGRV 361
            P+S V   L +G++
Sbjct: 439 LPDSGVFEYLSKGQI 453


>Z68753-5|CAB54512.2|  613|Caenorhabditis elegans Hypothetical
           protein ZC518.3b protein.
          Length = 613

 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
 Frame = +2

Query: 146 GSSIVVATTHLLYNPKRTDVRLAQIKILLAEIDRFAYFNNGR---ESGHFPVILTGDFNS 316
           G+ +VVAT H+ ++P+  DV+L Q  +L  E+ R     + +        PV++ GDFNS
Sbjct: 395 GNPLVVATAHIHWDPEFCDVKLVQSMMLTHEVSRVLEEVSKKYQITQQQVPVLICGDFNS 454

Query: 317 TPESAVINLLDRGRV 361
            P+S V   L +G++
Sbjct: 455 LPDSGVFEYLSKGQI 469


>Z68753-4|CAB54511.2|  606|Caenorhabditis elegans Hypothetical
           protein ZC518.3a protein.
          Length = 606

 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
 Frame = +2

Query: 146 GSSIVVATTHLLYNPKRTDVRLAQIKILLAEIDRFAYFNNGR---ESGHFPVILTGDFNS 316
           G+ +VVAT H+ ++P+  DV+L Q  +L  E+ R     + +        PV++ GDFNS
Sbjct: 388 GNPLVVATAHIHWDPEFCDVKLVQSMMLTHEVSRVLEEVSKKYQITQQQVPVLICGDFNS 447

Query: 317 TPESAVINLLDRGRV 361
            P+S V   L +G++
Sbjct: 448 LPDSGVFEYLSKGQI 462


>AY043268-1|AAK85706.1|  606|Caenorhabditis elegans CCR4 protein.
          Length = 606

 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
 Frame = +2

Query: 146 GSSIVVATTHLLYNPKRTDVRLAQIKILLAEIDRFAYFNNGR---ESGHFPVILTGDFNS 316
           G+ +VVAT H+ ++P+  DV+L Q  +L  E+ R     + +        PV++ GDFNS
Sbjct: 388 GNPLVVATAHIHWDPEFCDVKLVQSMMLTHEVSRVLEEVSKKYQITQQQVPVLICGDFNS 447

Query: 317 TPESAVINLLDRGRV 361
            P+S V   L +G++
Sbjct: 448 LPDSGVFEYLSKGQI 462


>Z92809-2|CAB07271.1|  628|Caenorhabditis elegans Hypothetical
           protein R17.2 protein.
          Length = 628

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
 Frame = +2

Query: 146 GSSIVVATTHLLYNPKRTDVRLAQI----KILLAEIDRFAYFNNGRESGHFPVILTGDFN 313
           G  +V   THL +NP    V++ Q     + LL   +     N G E     V+  GDFN
Sbjct: 461 GKLLVCGNTHLHHNPIDEHVKVLQALTCTRKLLEIYEETRELNKGIE---VLVLFGGDFN 517

Query: 314 STPESAVINLLDRGRVRASSLRDNSDWK 397
           STP  AV NL+  G +       N D K
Sbjct: 518 STPNGAVFNLMSMGNLPKEDAVWNCDSK 545


>U97009-13|AAZ94736.1|  456|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein10 protein.
          Length = 456

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = -1

Query: 637 HLPVRLELVVNRDQV*GVTYDVTVEHPIVSIVPVITLVRVGRVESIFRVMYLNFVEI 467
           HL   +E   +R QV  +     + H  + ++  +TLV VG +  IFR   + FV I
Sbjct: 390 HLEFAMEFPNHRSQVPAINKLGWIAHYYLDVIAFLTLVVVGFLYLIFRFTKIVFVRI 446


>Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical
           protein F54D1.6 protein.
          Length = 1423

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 251 AYFNNGRESGHFPVILTGDFNSTPE 325
           A FN G  +G  PV  T DF +TP+
Sbjct: 300 ALFNGGNHTGLVPVDPTQDFKNTPK 324


>AF099918-5|AAK29841.2|  391|Caenorhabditis elegans Hypothetical
           protein H05C05.3 protein.
          Length = 391

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +2

Query: 386 SDWKRIGVTDNCQHLAVYLNRQQGCP-SNFNKIKIHNSKYAFDSANADESD 535
           +DWKR  +  N  H    L     CP SN +K +++ S +  +  + + SD
Sbjct: 340 TDWKRCILCKNPAHYDCTLIVNDKCPCSNNSKFELYPSNFQIEFDSDESSD 390


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,550,488
Number of Sequences: 27780
Number of extensions: 302046
Number of successful extensions: 929
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)