Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0110
         (637 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    24   1.4  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   5.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   7.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   7.6  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   7.6  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 454 LLSV*INGQVLAVIGDADSFPIRI 383
           LLS  +NG  L  IGD + F + I
Sbjct: 190 LLSCEVNGSTLVYIGDNEGFALII 213


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 87  GSSGWKNSTGSPSFHCLALLGSASFP 10
           G   WK  T + S  CL+  GS  +P
Sbjct: 120 GDLDWKYYTTNESHACLSTGGSCYWP 145


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -1

Query: 298 QYNRKMAGLPPIVEISESIDLGE*YFNLCESYVRSLRIVE 179
           QY++    +P +   S +ID    YF+ C++ + +   VE
Sbjct: 440 QYSQSELQMPGVKFESVNIDKLYTYFDKCDTLINNAVAVE 479


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -1

Query: 298 QYNRKMAGLPPIVEISESIDLGE*YFNLCESYVRSLRIVE 179
           QY++    +P +   S +ID    YF+ C++ + +   VE
Sbjct: 440 QYSQSELQMPGVKFESVNIDKLYTYFDKCDTLINNAVAVE 479


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 348 IEDALERVHYET 383
           +  AL+R+HYET
Sbjct: 706 VSGALDRLHYET 717


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,410
Number of Sequences: 438
Number of extensions: 3690
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)