Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0109
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    28   0.062
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   1.3  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   3.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   3.1  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   7.1  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   7.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.1  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   9.3  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   9.3  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 28.3 bits (60), Expect = 0.062
 Identities = 15/80 (18%), Positives = 33/80 (41%)
 Frame = +2

Query: 239 PDDLKVSRSSYANSLERPKSEMMKKLLAKNPILNVHIDQSTQREASTSAEVQTPMTDASK 418
           PDD+ + +   +    +P   +       +PIL+    ++ + +A+++    TP+   + 
Sbjct: 107 PDDVFIRKFETSFESGKPSGVISTNTSPPSPILSNRFGENEEADAASNVISSTPLPPTTS 166

Query: 419 SAMHQPDIVNFDLKPSEMKT 478
           +         F  KPS   T
Sbjct: 167 TTTRTTLTTKFTTKPSTKPT 186


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +2

Query: 479 KDYEDFVSNIRVGSNNSSLNKKMESFSTDWRDSKEGSD 592
           K YE F  NI++G +  S N+   S    +  S  G +
Sbjct: 425 KFYEQFSKNIKLGIHEDSQNRAKLSELLRYHTSASGDE 462


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 245 DLKVSRSSYANSLERPKSEMMKKLLAKNPI 334
           +L V    + N + RP    + K LA++PI
Sbjct: 472 ELPVFLQEHRNGMYRPSIYFISKTLAESPI 501


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 245 DLKVSRSSYANSLERPKSEMMKKLLAKNPI 334
           +L V    + N + RP    + K LA++PI
Sbjct: 472 ELPVFLQEHRNGMYRPSIYFISKTLAESPI 501


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
 Frame = +2

Query: 326 NPILNVHID--QSTQREASTSAEV-----QTPMTDASKSAMHQPDIVNFDLKPSEMKTKD 484
           NP L    D  Q+T++  + + E+     + P+ ++ + +++QP + +FD   + M   D
Sbjct: 22  NPFLASDCDKNQNTEQNYTHNNEMYHRVKEEPIYESCRFSINQPYLNHFDNSVTPMVNHD 81

Query: 485 YEDFVS 502
           +   +S
Sbjct: 82  FTQHLS 87


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
 Frame = +2

Query: 326 NPILNVHID--QSTQREASTSAEV-----QTPMTDASKSAMHQPDIVNFDLKPSEMKTKD 484
           NP L    D  Q+T++  + + E+     + P+ ++ + +++QP + +FD   + M   D
Sbjct: 22  NPFLASDCDKNQNTEQNYTHNNEMYHRVKEEPIYESCRFSINQPYLNHFDNSVTPMVNHD 81

Query: 485 YEDFVS 502
           +   +S
Sbjct: 82  FTQHLS 87


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +3

Query: 336 STYTSTRARKERLLPVPKSKRR*LTLRNPP 425
           ST T T  +  R  P P  + +  +L  PP
Sbjct: 253 STCTRTTLKNNRASPYPMQRPKSASLSPPP 282


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 371 PLFACSGRC 345
           P FAC GRC
Sbjct: 61  PSFACIGRC 69


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/37 (21%), Positives = 21/37 (56%)
 Frame = +2

Query: 392 QTPMTDASKSAMHQPDIVNFDLKPSEMKTKDYEDFVS 502
           + P+ ++ + +++QP + +FD   + M   D+   +S
Sbjct: 51  EEPIYESCRFSINQPYLNHFDNSVTPMVNHDFTQHLS 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,502
Number of Sequences: 336
Number of extensions: 3328
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)