Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0109
(681 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10204| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.053
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.053
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 34 0.093
SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_57323| Best HMM Match : ShTK (HMM E-Value=0) 32 0.49
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 31 0.65
SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12) 31 0.86
SB_44756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12) 31 1.1
SB_59487| Best HMM Match : DUF1014 (HMM E-Value=2.4) 30 1.5
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_49130| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_6365| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_47305| Best HMM Match : I-set (HMM E-Value=0) 29 3.5
SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011) 29 3.5
SB_49919| Best HMM Match : zf-CCHC (HMM E-Value=0.19) 29 4.6
SB_19362| Best HMM Match : M (HMM E-Value=0.0014) 29 4.6
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_31131| Best HMM Match : Drf_FH1 (HMM E-Value=2.4) 28 6.1
SB_48319| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37) 28 8.0
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_10204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 35.9 bits (79), Expect = 0.030
Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 10/197 (5%)
Frame = +2
Query: 107 KTTSDGSTLAPPDNDPPTQPNLTKLET---TPTKYDEKITMNYDTNIPDDLKVSRS-SYA 274
K T + ST A + N + T T Y K T NY T ++ + +Y+
Sbjct: 206 KATENYSTKATENYSTKATENYSTKATENYTTENYSTKATENYSTKAIENYSTKATENYS 265
Query: 275 NSLERPKSEMMKKLLAKNPILNVHIDQSTQREASTSAEVQTPMTDASKSAMHQPDIVNFD 454
+ S K + N + +++T+ ++ + E + T A ++ ++ I N+
Sbjct: 266 TKAIKNYSTKATKNYSTKATEN-YSNKATKNYSTKATENYS--TKAIENYSNKA-IENYS 321
Query: 455 LKPSEMK-TKDYEDF----VSNIRVGSNNSSLNKKMESFSTDWRDSKEGSDLVTFTTDRT 619
K +E TK E++ + N + + NK +E++ST ++ + ++T T
Sbjct: 322 TKATENYITKARENYSTKAIENYSTKATENYSNKAIENYSTKATENYSNKAIENYSTKAT 381
Query: 620 QNLEDKSRKTY-TKSIE 667
+N K+R+ Y TK+ E
Sbjct: 382 ENYITKARENYSTKAAE 398
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 35.1 bits (77), Expect = 0.053
Identities = 49/181 (27%), Positives = 71/181 (39%), Gaps = 1/181 (0%)
Frame = +2
Query: 29 ETSDHLAKRIMDENMKVHLKLVSEFAKTTSDGSTLAPPDNDPPTQPNLTKLETTPTKYDE 208
+T+ H R + K + A T GST +P DN P ++ P K ++
Sbjct: 734 KTTPHTTTRPSEATAKPQATAIPP-ATTKPTGSTQSPTDNSP------SEKAMKPGKANK 786
Query: 209 KITMNYDTNIPDDLKVSRSSYANSLERPKSEMMKKLLAKNPILNVHIDQSTQREASTSAE 388
T P ++K SS A + K K A P + QS AST E
Sbjct: 787 P---PVPTQAPTEMK---SSTARNPPPKKPPNPTKQSATAPTPSTQGSQSPTGSASTLGE 840
Query: 389 VQTPMTD-ASKSAMHQPDIVNFDLKPSEMKTKDYEDFVSNIRVGSNNSSLNKKMESFSTD 565
+P T A+K M +P+ SE + + + I GS LNK+M +TD
Sbjct: 841 NPSPTTHYATKPTMAEPN--------SENEALQLHNNLRAIH-GSQPMRLNKEMSDAATD 891
Query: 566 W 568
W
Sbjct: 892 W 892
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 107 KTTSDGSTLAPPDNDPPTQPNLTKLETT 190
+T +G+T + P+ PTQP TK TT
Sbjct: 268 ETQPEGTTASTPEVPGPTQPTQTKKTTT 295
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 35.1 bits (77), Expect = 0.053
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Frame = +2
Query: 50 KRIMDENMKVHLKLVS-EFAKTTSDGSTLAPPDNDPPTQPNLTKLETTPTKYDE--KITM 220
+ ++ EN ++ +L E AK + LA + + +L++L + D+ +I
Sbjct: 683 QELVAENCQLREELADLENAKQLEERQLLARIET---LEEDLSRLSVKNDELDKAIRICS 739
Query: 221 NYDTNIPDDLKVSRSSYANSLERPKSEMMKKLLAKNPILNVHIDQSTQREASTSAEVQTP 400
I D LK +R A SLE ++ KKL A+ IL + Q +Q + + T
Sbjct: 740 KEKEGIEDSLKHARDQIA-SLESSSTDASKKLRAEIKILEAQLKQKSQTVDELKSTMDTL 798
Query: 401 MTDASK 418
M ASK
Sbjct: 799 MDSASK 804
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 34.3 bits (75), Expect = 0.093
Identities = 18/93 (19%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +2
Query: 200 YDEKITMNYDTNIPDDLKVSRSSYANSLERPKSEMMKKLLAKNPILNVHI--DQSTQREA 373
+DEK DTN P+ ++ + + ++++++ + ++ V I + E
Sbjct: 420 FDEKGNHVQDTNAPESEELPTDCELEDVSDEQGRVVRRIVKRYIVVKVFIINHEGQLEEI 479
Query: 374 STSAEVQTPMTDASKSAMHQPDIVNFDLKPSEM 472
S E + + ++S++ +P +++ D KP +M
Sbjct: 480 EISPEEKAEILESSQTQTTKPSVISLDEKPLKM 512
>SB_36217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1356
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/92 (21%), Positives = 44/92 (47%)
Frame = +2
Query: 257 SRSSYANSLERPKSEMMKKLLAKNPILNVHIDQSTQREASTSAEVQTPMTDASKSAMHQP 436
+ S+ + P+S+++++LLA +L + + Q A T A + T A++ +H+P
Sbjct: 154 AESAECQQVTAPQSKLIQELLASQKVLTEGLQRQQQVLADTQASLATL---ANRPFLHEP 210
Query: 437 DIVNFDLKPSEMKTKDYEDFVSNIRVGSNNSS 532
+ +P++ + ED R G + +
Sbjct: 211 TRPGYPQEPNDWAQQWKEDPTPCSRTGGRSEA 242
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/45 (28%), Positives = 29/45 (64%)
Frame = +2
Query: 509 RVGSNNSSLNKKMESFSTDWRDSKEGSDLVTFTTDRTQNLEDKSR 643
R S SSL+ K+++ S ++G D +++T+DR+ +++ ++R
Sbjct: 154 RKSSKTSSLDIKLKNGSRGSESGEDGQDTMSYTSDRSDSVQGRNR 198
>SB_57323| Best HMM Match : ShTK (HMM E-Value=0)
Length = 911
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 80 HLKLVSEFAKTTSD--GSTLAPPDNDPPTQPNLTKLETTP 193
H + + K T D G T PD PPTQP +T+ TP
Sbjct: 754 HDEYMKSVCKRTCDYCGGTTKAPDTQPPTQPPVTQPPDTP 793
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 110 TTSDGSTLAPPDNDPPTQPNLTKLETTP 193
T T PD PPTQP +T+ TP
Sbjct: 691 TDDPDCTTETPDTQPPTQPPVTQPPDTP 718
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 31.5 bits (68), Expect = 0.65
Identities = 21/76 (27%), Positives = 33/76 (43%)
Frame = +2
Query: 14 HEGEHETSDHLAKRIMDENMKVHLKLVSEFAKTTSDGSTLAPPDNDPPTQPNLTKLETTP 193
H + ++DH+ R +E + L + A +TS + PP + PPT T ETT
Sbjct: 113 HTIDIRSTDHVHSRAQEEQIPT-LSTLKTTATSTSTTKYIPPPPS-PPTTTTTTTPETTA 170
Query: 194 TKYDEKITMNYDTNIP 241
+ T +T P
Sbjct: 171 PRTTTPETTTPETTTP 186
>SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12)
Length = 1879
Score = 31.1 bits (67), Expect = 0.86
Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 1/113 (0%)
Frame = +2
Query: 98 EFAKTTSDGSTLAPPDNDPPTQPNLTKLETTPTKYDEKI-TMNYDTNIPDDLKVSRSSYA 274
E +T+ + L+ +P L +E T +E I +M ++ +S +
Sbjct: 1587 EQQQTSQEEPALSMEQQQTSKKPTLG-VEQQQTSQEEPILSMKQQQTSQEEPILSMEQHQ 1645
Query: 275 NSLERPKSEMMKKLLAKNPILNVHIDQSTQREASTSAEVQTPMTDASKSAMHQ 433
S E P M ++ +K P L V Q++Q E S + Q + +M Q
Sbjct: 1646 TSQEEPALSMEQQQTSKKPTLGVEQQQTSQEEPILSMKQQQTSQEEPILSMEQ 1698
Score = 29.9 bits (64), Expect = 2.0
Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 1/116 (0%)
Frame = +2
Query: 89 LVSEFAKTTSDGSTLAPPDNDPPTQPNLTKLETTPTKYDEKI-TMNYDTNIPDDLKVSRS 265
L E +T+ + L+ +P L +E T +E I +M ++ +S
Sbjct: 1639 LSMEQHQTSQEEPALSMEQQQTSKKPTLG-VEQQQTSQEEPILSMKQQQTSQEEPILSME 1697
Query: 266 SYANSLERPKSEMMKKLLAKNPILNVHIDQSTQREASTSAEVQTPMTDASKSAMHQ 433
S E P M ++ +K P L V Q++Q E S + Q + +M Q
Sbjct: 1698 QQRTSQEEPALSMEQQQTSKKPTLGVEQQQTSQEEPILSMKQQQTSQEEPILSMEQ 1753
>SB_44756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 30.7 bits (66), Expect = 1.1
Identities = 42/188 (22%), Positives = 68/188 (36%), Gaps = 2/188 (1%)
Frame = +2
Query: 110 TTSDGSTLAPPDNDPPTQPNLTKLETTPTKYDEKITMNYDTNIPDDLKVSRSSYANSLER 289
TT + ST A N + T Y K T NY T ++ K + + Y+
Sbjct: 119 TTENYSTKAAEKYSTKATENYSTKATE--NYSTKATENYSTKATENYKATEN-YSTKATE 175
Query: 290 PKSEMMKKLLAKNPILNVHIDQSTQREASTSAEVQTPMTDASKSAMHQPDIVNFDLKPSE 469
S K+ + N + + + T T+ + + + K SE
Sbjct: 176 NYSTKSKENNSTKATENYSTKATEKYSTKATENFSTKATENYSTKATE----KYSTKASE 231
Query: 470 -MKTKDYEDFVSNIRVGSNNSSLNKKMESFSTDWRDSKEGSDLVTFTTDRTQNLEDKSRK 646
TK E + + + N S+ K E +ST + F+T T+N K+ K
Sbjct: 232 NYSTKATEKY--STKAAENYST--KATEKYSTKATEKYSTKATENFSTKATENYSTKATK 287
Query: 647 TY-TKSIE 667
Y TK+ E
Sbjct: 288 NYSTKAAE 295
>SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12)
Length = 893
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 188 TPTKYDEKITMNYDTNIPDDLKVSRSSYAN 277
+PT D K T+ YDTN+ D+ KV ++S N
Sbjct: 352 SPTTMDRK-TVGYDTNLVDETKVPQNSNVN 380
>SB_59487| Best HMM Match : DUF1014 (HMM E-Value=2.4)
Length = 176
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/83 (26%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
Frame = +2
Query: 11 RHEGEHETSDHLAKRIMDENMKVHLKLVSEFAKTTSDGS----TLAPPDNDPPTQPNLTK 178
+ + E E AKRI +EN K K E K + + +PP+N P +
Sbjct: 27 QRKAEEEKQKEEAKRIEEENKKKEEKEKEEARKRLEEAQKPLLSPSPPNNTPVDDKKIDN 86
Query: 179 LETTPTKYDEKITMNYDTNIPDD 247
+ P DE N DD
Sbjct: 87 DDNAPHPKDEPDIQEQPENEDDD 109
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 128 TLAPPDND-PPTQPNLTKLETTPTKYDEKITMNYDTNIPDDLKVSRSSYANSLERPKSE 301
TLA P P P TK E TP + +T+ + D +VSR S N ++ K++
Sbjct: 38 TLASPKRSLPRLSPKFTKKEKTPNGKNLSLTLETGSADTLDGEVSRDSLVNGTKQKKNK 96
>SB_49130| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 29.9 bits (64), Expect = 2.0
Identities = 33/169 (19%), Positives = 67/169 (39%), Gaps = 14/169 (8%)
Frame = +2
Query: 5 RNRHEGEHETSDHLAKRIMDENMKVHLKLVSEFAKTTSDGSTLAPPDNDPPTQPNLTKL- 181
R R + H +MD+ K H ++ K + T D + +L K+
Sbjct: 147 RQRERESIQDFSHSLMVLMDKIQKCHPGTIANPDKDRTLRDTFVENLQDQQLRRDLKKMI 206
Query: 182 ETTPTKYDEKITMNYDTNIPDDLKVSRSSYANSLER----------PKSEMMKKLLAKNP 331
+P + + + + +D R++Y+ +E P+S+++++LLA
Sbjct: 207 RESPDRRFQAVREEALRSAEEDRPSPRTAYSREVETESAECQQVTAPQSKLIQELLASQK 266
Query: 332 ILNVHIDQSTQREASTSAEVQTPMTDA---SKSAMHQPDIVNFDLKPSE 469
+L + + Q A T A + T A + +H+P + KP +
Sbjct: 267 VLTEGLQKQHQVLADTQASLATLANRACWPHQPFLHEPTRPGYPQKPDD 315
>SB_6365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1017
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Frame = +2
Query: 95 SEFAKTTSDGSTLAPPDNDPPT--QPNLTKLETTPTKYDEKITMNYDTNIPDDLKVSRSS 268
S A TT+ +T PP PPT P TK T + ++ M + + D +
Sbjct: 805 STSAATTTAPATTTPPTTAPPTTAPPTTTKEPQTDVTAEIRLKMTWKMELSDKMSKEFKD 864
Query: 269 YANSLERPKSEMMKK 313
A L+ ++ K+
Sbjct: 865 LAKRLKGQIADAFKE 879
>SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3464
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +1
Query: 133 GTTRQRSADTT*PYETRNDTDQIR*ENNDELRHKYTGRLKSIAQFVREQLGETKIRDDEE 312
G TR RS DTT P E NDT + ++ H R S A+ +Q +K D+++
Sbjct: 2457 GVTRSRSQDTTIPEEYVNDTFESL-DSTRTPTHSTPVRKASPARDSLKQRSSSK-EDEQK 2514
Query: 313 TARQKSYTQ 339
+ + S T+
Sbjct: 2515 SEEETSMTE 2523
>SB_47305| Best HMM Match : I-set (HMM E-Value=0)
Length = 5832
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -3
Query: 358 ALVDVYVEYRIFGEQFLHHLGFWSLQAVRVR 266
AL+D+ V+ R+FG +F+ G WS + VR R
Sbjct: 4138 ALIDLTVKERLFGPEFIEEDGKWS-KIVRER 4167
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 367 SLRALVDVYVEYRIFGEQFLHHLGFWS 287
S ++VD+ V+ R+FG +FL G W+
Sbjct: 3365 STGSVVDLTVKERLFGPEFLEEEGVWN 3391
>SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011)
Length = 1199
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +2
Query: 224 YDTN--IPDDLKVSRSSYANSLERPKSEMMKKLLAKNPILNVHIDQSTQREASTSAEVQT 397
Y TN I D+ RSSYA+ L+ P+ + ++ LA PI + + + E + E+
Sbjct: 222 YRTNEIISTDIN-RRSSYADQLQSPRFQRKERPLAHVPIPSFEEFKRRKSEVQNTNELSA 280
Query: 398 PMTDASKSAMHQP 436
T+ ++ + P
Sbjct: 281 QNTEQARKYSNVP 293
>SB_49919| Best HMM Match : zf-CCHC (HMM E-Value=0.19)
Length = 523
Score = 28.7 bits (61), Expect = 4.6
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = +2
Query: 380 SAEVQTPMTDASKSAMHQPDIVN---FDLKPSEMK-TKDYEDFVSNIRVGSNNSSLNKKM 547
S+EV+ P ++K Q +N F + S++K +K + V + + SN +++
Sbjct: 65 SSEVKHPKKQSNKVEHSQQQSINVEHFQQQSSKVKHSKQQSNKVEHFQRQSNKQTISPVA 124
Query: 548 ESFSTDWRDSKEGSDLVTFTTDRTQNLEDKSRKTYTKSI 664
TD S GS TTD L+D KTYT ++
Sbjct: 125 AKSCTDHMVS--GS-----TTDGYYQLQDSQGKTYTYTV 156
>SB_19362| Best HMM Match : M (HMM E-Value=0.0014)
Length = 722
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +2
Query: 230 TNIPDDLKVSRSSYANSLERPKSEMMKKLLAKNPILNVHIDQSTQREASTSAEVQT 397
+ + DDLKVS SY +E+ K ++++ L H Q+ + QT
Sbjct: 97 SKLEDDLKVSLLSYFEQVEKQKEDLIESFNVMQQQLTRHQQMCQQQSKEMEDKEQT 152
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 28.3 bits (60), Expect = 6.1
Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
Frame = +2
Query: 110 TTSDGSTLAPPDNDPPTQPNLTKLETTPTKYDEKITMNYDTNIPDDLKVSRSSYANSLER 289
T+S+ S + P +ND T T ++ TPT + +T + S S E
Sbjct: 262 TSSNDSKIHPSENDVITSNKRTVIKPTPT--ESVVTKPIPAEGAVTKQTSTESAVTQPEP 319
Query: 290 PKSEMMKKLLAKNPIL-NVHIDQSTQREASTSAEVQTPMTDASKSAMHQP 436
+S + K++ ++ + I+ + A T + V P S M P
Sbjct: 320 TESTVTKQITTESVVTKQTPIESAVTMPAPTESVVTMPAPTESVVTMPAP 369
>SB_31131| Best HMM Match : Drf_FH1 (HMM E-Value=2.4)
Length = 407
Score = 28.3 bits (60), Expect = 6.1
Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
Frame = +2
Query: 110 TTSDGSTLAPPDNDPPTQPNLTKLETTPTKYDEKITMNYDTNIPDDLKVSRSSYANSLER 289
T+S+ S + P +ND T T ++ TPT + +T + S S E
Sbjct: 14 TSSNDSKIHPSENDVITSNKRTVIKPTPT--ESVVTKPIPAEGAVTKQTSTESAVTQPEP 71
Query: 290 PKSEMMKKLLAKNPIL-NVHIDQSTQREASTSAEVQTPMTDASKSAMHQP 436
+S + K++ ++ + I+ + A T + V P S M P
Sbjct: 72 TESTVTKQITTESVVTKQTPIESAVTMPAPTESVVTMPAPTESVVTMPAP 121
>SB_48319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 965
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +2
Query: 53 RIMDENMKVHLKLVSEFAKTT---SDGSTLAPPDNDPPTQPNLTKLETTPTK 199
R+ +++VH KLV+ T + PP PP +TKL+TT TK
Sbjct: 441 RVELRHVEVHEKLVARQDDTPIPPPPPMSPPPPTPPPPATSPVTKLQTTTTK 492
>SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37)
Length = 599
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 350 DQSTQREASTSAEVQTPMTDASKSAMHQPDIVNFDLKPSEMKTKDYEDFVSNIRVGSNNS 529
+++ R Q P+T ++ S P+ VNF+ P ++ + + V +G NS
Sbjct: 255 ERNCARNQDVPDVTQDPVTFSASSTTQGPEAVNFESSPRDISCETPGNHVRPALIG--NS 312
Query: 530 SLNK 541
L+K
Sbjct: 313 GLSK 316
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Frame = +2
Query: 440 IVNFDLKPSEMKTKDYED--FVSNIRVGSN 523
IVN D K +E +TK +E+ VSN+R+ +N
Sbjct: 1206 IVNVDTKSAEGRTKKFEESKAVSNVRLKAN 1235
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 110 TTSDGSTLAPPDNDPPTQPNLTKLETTPTKYDEKITMNYDTNIPDDLKVS 259
T+ T +PP + P + +TPT D++ T + + PD L V+
Sbjct: 718 TSPSQQTTSPPPSSPSIGQPWIPVTSTPTHADQRETDQQEGSKPDTLTVT 767
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,953,030
Number of Sequences: 59808
Number of extensions: 440632
Number of successful extensions: 1901
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1871
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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