Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0108
(731 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 66 3e-11
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 58 7e-09
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 56 4e-08
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 51 8e-07
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 47 1e-05
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 47 1e-05
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 47 2e-05
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 47 2e-05
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 46 4e-05
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 45 6e-05
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 44 1e-04
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 43 2e-04
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 42 5e-04
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 42 7e-04
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 42 7e-04
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 41 0.001
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 40 0.003
SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 40 0.003
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 39 0.004
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 39 0.004
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 38 0.006
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 38 0.011
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 38 0.011
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 37 0.019
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 37 0.019
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 36 0.026
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_14872| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.045
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 36 0.045
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.059
SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.059
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 35 0.078
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 34 0.10
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 34 0.10
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 34 0.14
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 34 0.14
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 33 0.18
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 33 0.24
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_53239| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 32 0.55
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.73
SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 1.7
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 29 2.9
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 28 6.8
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 66.1 bits (154), Expect = 3e-11
Identities = 36/75 (48%), Positives = 45/75 (60%)
Frame = +1
Query: 457 CLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNE 636
CLGVFGLSLYTTE+ + +F KYGPV+ +Q+V D + AK
Sbjct: 182 CLGVFGLSLYTTERDLRPVFEKYGPVEAIQIVYDHQ--------------------AKER 221
Query: 637 CTGMEIDGRRIRVDY 681
TG+E+DGRRIRVDY
Sbjct: 222 TTGIELDGRRIRVDY 236
Score = 38.7 bits (86), Expect = 0.005
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = +3
Query: 681 SITQRAHTPTPGIYMGK 731
S+T+RAHTPTPG+YMGK
Sbjct: 237 SVTKRAHTPTPGVYMGK 253
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 58.0 bits (134), Expect = 7e-09
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = +1
Query: 454 RCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKN 633
R + V + +E+Q+ IFS+ GPV ++V D +TG+ +G+ F ++D E A A
Sbjct: 25 RSVFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMR 84
Query: 634 ECTGMEIDGRRIRVD 678
G E++GR +RVD
Sbjct: 85 NLNGYELNGRALRVD 99
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 56.8 bits (131), Expect = 2e-08
Identities = 31/82 (37%), Positives = 47/82 (57%)
Frame = +1
Query: 436 ENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMED 615
+NP P+ L V LS TT + F +V+ D ++G SRGF FV ++D+E
Sbjct: 284 QNP-PNSSLIVRNLSYDTTTDSLGAAFEG---CSNAKVIFDRESGESRGFGFVDYDDVET 339
Query: 616 AKIAKNECTGMEIDGRRIRVDY 681
AK +E G E+DGR++R+D+
Sbjct: 340 AKKVLSEMAGAEVDGRQVRLDF 361
Score = 31.5 bits (68), Expect = 0.73
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Frame = +1
Query: 436 ENPTPSRC------LGVF--GLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCF 591
E PTP + + VF LS E+ + F + G +V+ + GRSRGF +
Sbjct: 166 ETPTPKKTVPAKEEMSVFLGNLSFDADEETLAAFFEEKGLSATCRVI--TQEGRSRGFGY 223
Query: 592 VYFEDMEDAKIAKNECTGMEIDGRRIRVD 678
F ED A E G + GR IR++
Sbjct: 224 ADFTSKEDYNKAL-ELNGEDCCGREIRIN 251
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 55.6 bits (128), Expect = 4e-08
Identities = 29/78 (37%), Positives = 44/78 (56%)
Frame = +1
Query: 448 PSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIA 627
P L V L+ TT++ + IFS++G + +V+ D KTG S + F+ FE ED + A
Sbjct: 118 PDNVLFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERA 177
Query: 628 KNECTGMEIDGRRIRVDY 681
+ + ID RRI VD+
Sbjct: 178 YFKMDNVLIDDRRIHVDF 195
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 466 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTG 645
V GL TTE ++ F+++G +D +V +D T RSRGF FV F+ EDAK + T
Sbjct: 119 VLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLS--TS 176
Query: 646 MEIDGRRIRVDYP-*HSELTLP 708
I GR V P EL +P
Sbjct: 177 HRIQGRLCEVRLPRPKEELNVP 198
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 53.6 bits (123), Expect = 2e-07
Identities = 22/53 (41%), Positives = 34/53 (64%)
Frame = +1
Query: 523 YGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY 681
YG + V +V D KTG+ +GFCF+ +ED +A + G+++ GR IRVD+
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNGIKLGGRTIRVDH 54
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/68 (41%), Positives = 38/68 (55%)
Frame = +1
Query: 475 LSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEI 654
L E + FS+Y VD VQV+ D +T R RGF FV F ++ + A NE G E
Sbjct: 237 LDFKVNEADLQDRFSRYDVVD-VQVISDRETQRPRGFAFVTFGSKKNMEDAINELDGQEF 295
Query: 655 DGRRIRVD 678
DGR ++V+
Sbjct: 296 DGRSMKVN 303
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Frame = +1
Query: 454 RCLGVFGLSLYTTEQQINHIFSKYGP--VDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIA 627
+CL V + L E + + +F + G + V+V+ D +TGR RGF FV F ++ A
Sbjct: 8 KCL-VASIPLCFVESEADVLFLRNGSKFLLSVKVITDRETGRPRGFGFVTFGSEDEMDKA 66
Query: 628 KNECTGMEIDGRRIRVD 678
++ G ++DGR ++V+
Sbjct: 67 IDKFDGEDLDGRPMKVN 83
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 51.2 bits (117), Expect = 8e-07
Identities = 25/53 (47%), Positives = 33/53 (62%)
Frame = +1
Query: 460 LGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDA 618
L V GLS TT++ + FSKYG + V + +DA TGR RGF FV F+ +A
Sbjct: 31 LFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEA 83
Score = 44.8 bits (101), Expect = 7e-05
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 466 VFGLSLYTTEQQINHIFSK-YGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECT 642
V GL T++++I F K Y PV +++ + + + R RGFCFV F D ED E
Sbjct: 107 VGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSF-DSEDTVDKICETQ 165
Query: 643 GMEIDGRRIRV 675
I+G ++ V
Sbjct: 166 FHNIEGNKVEV 176
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/81 (29%), Positives = 41/81 (50%)
Frame = +1
Query: 439 NPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDA 618
+P L V + E I+ +FS YG + + V +D +TG +G+ V +E ++A
Sbjct: 288 HPVEGWILFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEA 347
Query: 619 KIAKNECTGMEIDGRRIRVDY 681
+ A G E+ G+ I VD+
Sbjct: 348 QSALEALNGAEMLGQNISVDW 368
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/75 (38%), Positives = 41/75 (54%)
Frame = +1
Query: 454 RCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKN 633
RC + LS EQ + F VD V+V+ D +TGR RGF FV F E+ + A +
Sbjct: 6 RCY-IGNLSYSVDEQALEEKFHGCDVVD-VKVITDRETGRPRGFGFVTFGSKEEMEKAID 63
Query: 634 ECTGMEIDGRRIRVD 678
E G + DGR ++V+
Sbjct: 64 EFDGQDFDGRPMKVN 78
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 427 RLLENPTPSRC-LGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFE 603
R +PTP L V L+ + + IFS YG V V + D SRGF +V +
Sbjct: 1147 RRKRSPTPKPTKLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYV 1206
Query: 604 DMEDAKIAKNECTGMEIDGRRIRV 675
D E+ + A G +IDG+ I V
Sbjct: 1207 DPEECEKALKHMDGGQIDGQEIAV 1230
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/71 (36%), Positives = 38/71 (53%)
Frame = +1
Query: 466 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTG 645
V GL+ E+ ++ F +G + VQ+ +D T + RGF FV FE ED A +
Sbjct: 9 VGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMNE 68
Query: 646 MEIDGRRIRVD 678
E+ GR IRV+
Sbjct: 69 SELFGRTIRVN 79
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/64 (40%), Positives = 35/64 (54%)
Frame = +1
Query: 493 EQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIR 672
E+ ++ IF KYG + V + + G F FV FED DA+ A G E DG RIR
Sbjct: 274 EKDLHDIFYKYGHIADVD--LKNRRGAGPPFAFVEFEDPRDAEDAVKGRDGHEFDGYRIR 331
Query: 673 VDYP 684
V++P
Sbjct: 332 VEFP 335
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +1
Query: 502 INHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY 681
I +FS+ G V QV I+ G SRGF FV + E+A+ + G +++G IRV Y
Sbjct: 222 IKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEKGQRAHNGRQVEGSNIRVAY 281
Score = 40.3 bits (90), Expect = 0.002
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +1
Query: 448 PSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIA 627
P L V L TE Q + S YG ++++ +V TG S+G+ FV + E+A A
Sbjct: 111 PESLLFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQA 170
Query: 628 KNE---CTGMEIDGRRIRVDYP*HSELT 702
K + I GR +RV + + LT
Sbjct: 171 KQQLLNTASKYIGGRILRVAFAESNLLT 198
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/73 (30%), Positives = 39/73 (53%)
Frame = +1
Query: 493 EQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIR 672
E+ I F +GP++K+ + D + +GF FV ++ E A++A + G+ + GR I+
Sbjct: 115 EEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQMNGVLLGGRNIK 174
Query: 673 VDYP*HSELTLPL 711
V P + PL
Sbjct: 175 VGRPSNVPQAAPL 187
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 45.2 bits (102), Expect = 6e-05
Identities = 23/59 (38%), Positives = 38/59 (64%)
Frame = +1
Query: 493 EQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRI 669
++Q+ I ++ G + ++V+ D + G+S+GF FV FE E+A+ A N G EI GRR+
Sbjct: 122 DEQMKEICAEAGKIVSLKVMTDPE-GKSKGFGFVSFETPEEAEEAVNVLNGKEIGGRRL 179
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 44.8 bits (101), Expect = 7e-05
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +1
Query: 439 NPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDA 618
N P L V GL+ TT + + F YG + V V+ D+ T +SRGF +V F D +
Sbjct: 9 NNDPRAKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVT 68
Query: 619 KIA---KNECTGMEIDGRRIRV 675
+ K E IDG+ + V
Sbjct: 69 RNVLKDKVENGAHRIDGKEVEV 90
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +1
Query: 493 EQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIR 672
E+ + +F+ G V+ V+++ D KTG +GF +V FE +DA + + E GR+IR
Sbjct: 69 EEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFES-KDAVVFALKMNNAEFKGRKIR 127
Query: 673 V 675
V
Sbjct: 128 V 128
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +1
Query: 535 DKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVD 678
+ V ++ D +TGR RGF FV F E+ + A +E G ++DGR ++V+
Sbjct: 123 EAVNIITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVN 170
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 490 TEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRI 669
+++ I IF G V +++ D TG+S G+ FV +++ +DA A E G + + +
Sbjct: 39 SQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTL 98
Query: 670 RVDY 681
+V +
Sbjct: 99 KVSF 102
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +1
Query: 457 CLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDA 618
C+ V+GL T + +FS YG + +++ +D +G+ FV + E+A
Sbjct: 273 CIFVYGLPQEATPLFLYKLFSPYGAITNIELKLD------KGYGFVNMSNYEEA 320
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = +1
Query: 454 RCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKN 633
R L + L+ + E +I F ++G V+KV ++ D ++GRSRGF FV + + A
Sbjct: 9 RKLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIE 67
Query: 634 ECTGMEIDGRRIRV 675
+ + GR I V
Sbjct: 68 KMNQSSVGGRNITV 81
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +1
Query: 460 LGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIA 627
L V L+ TT + + +F KYG + + + D T SRGF FV F + DA+ A
Sbjct: 18 LKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDA 73
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +1
Query: 472 GLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGME 651
GL Y E Q+ + S +G + +V D+ TG S+G+ F + D+ +A GM+
Sbjct: 679 GLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLGITDVAIQGLNGMQ 738
Query: 652 IDGRRIRV 675
+ +++ V
Sbjct: 739 LGDKKLIV 746
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 448 PSRCLGVFGLSLYT-TEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKI 624
PS+ G Y+ T ++ +F +YG V KV ++ D +T SRG F+ F D + A+
Sbjct: 7 PSKSTVYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQN 66
Query: 625 AKNECTGMEIDGRRIR 672
A ++ GR I+
Sbjct: 67 AVAAVNKKQMFGRTIK 82
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +1
Query: 466 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTG 645
V LS T E + +F GP+ ++ + D T +S+GF F+ F EDA A +G
Sbjct: 185 VTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINFVHREDAARAIEVLSG 244
Query: 646 MEIDGRRIRVDY 681
D + V++
Sbjct: 245 FGYDHLILNVEW 256
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/70 (34%), Positives = 39/70 (55%)
Frame = +1
Query: 472 GLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGME 651
GLS TE + +F+K+GPV V V++ ++G+SR FV+F + A+ A G +
Sbjct: 530 GLSEDVTENVLLELFNKFGPVKDV-VILRDESGKSRQSGFVHFWSSDVAEAANVGMNGCD 588
Query: 652 IDGRRIRVDY 681
I G+ + Y
Sbjct: 589 ILGKIVETKY 598
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +1
Query: 475 LSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDA----KIAKNECT 642
LS +T++ I ++F ++G + +VV+D T S+G FV + E +
Sbjct: 423 LSFDSTQKNITNLFKQFGDIAYCKVVVDHLTQHSKGSAFVKYRSAESVTQCLAATDEDSE 482
Query: 643 GMEIDGRRIRVD 678
G+ +DG R++VD
Sbjct: 483 GLFLDGNRLQVD 494
Score = 35.1 bits (77), Expect = 0.059
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +1
Query: 490 TEQQINHIFSKYGPVDKVQVVIDAKT-GRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRR 666
T+ + F + GP+ + +V D R RGF +V F EDA AK+ I GR
Sbjct: 32 TDAEFKSAFEEIGPLKRGFIVKDKDNQNRCRGFGYVTFALEEDALKAKDNI--KSIKGRP 89
Query: 667 IRVDYP*HSELTLPLRAST 723
I +D+ T P R T
Sbjct: 90 IHLDFSEKKARTKPGREGT 108
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 523 YGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGME 651
YG + V +V D KTG+ +GFCF+ +ED +A + G++
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNGIK 44
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/74 (33%), Positives = 34/74 (45%)
Frame = +1
Query: 433 LENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDME 612
++NP SR V S + I F +YG ++ V VV D T +RG C+V F
Sbjct: 18 VDNPPFSRVFIV--CSKRHNAEDIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKFVKAS 75
Query: 613 DAKIAKNECTGMEI 654
A +A E G I
Sbjct: 76 SAALACEEMDGRNI 89
>SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 541 VQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVD 678
+ +V ++K + RG+ F+ +E D A G +IDGRRI VD
Sbjct: 35 ISMVYNSKASKPRGYAFIEYEHERDMHAAYKHADGKKIDGRRIVVD 80
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 451 SRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDA 618
S+ + V G + TTE ++ F +YG V + ++V D K G S+G+ F+ FE E A
Sbjct: 7 SKRIFVKGFNRETTESELRAFFEEYGVVKESKIVRD-KHGVSKGYAFITFESQEVA 61
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/88 (28%), Positives = 40/88 (45%)
Frame = +1
Query: 412 LGDRVRLLENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCF 591
L D+ L V L E +I +FSK+G V +V++V + + G+ +G+ +
Sbjct: 157 LRDKFSKFPTSLDKHTLFVSNLPFDAKESEIEELFSKHGVVKQVRLVTN-RAGKPKGYGY 215
Query: 592 VYFEDMEDAKIAKNECTGMEIDGRRIRV 675
V +E A A E+ GR I V
Sbjct: 216 VEYEQESSASTAVLTLDKTEVKGRTISV 243
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/78 (32%), Positives = 42/78 (53%)
Frame = +1
Query: 448 PSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIA 627
P + V G++ +EQQ+ F +YG V K VVI+ T ++ V F+ ++ A IA
Sbjct: 326 PINTIWVGGVTNSLSEQQVERHFGRYGRVTK--VVINRVTNQA----LVSFDSVDSATIA 379
Query: 628 KNECTGMEIDGRRIRVDY 681
+ G + RR+RV++
Sbjct: 380 HAQMKGRTMFSRRVRVEF 397
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +1
Query: 493 EQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIR 672
E +I F ++G V+++++ K+ RS+G+ FV F E AKIA + + GR ++
Sbjct: 111 ENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEVAKIAADTMHNYMMFGRLLK 170
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +1
Query: 454 RCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDME 612
R + + GL+ TTE+ + FS++G + V VI + GRSRGF FV +E +
Sbjct: 50 RKIFIGGLNWNTTEEGLKDYFSQWGTI--VDCVIMKRDGRSRGFGFVTYESSD 100
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Frame = +1
Query: 538 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNEC-----TGMEIDGRRIRVDYP*HSELT 702
+V VV D +T RSR F +V F D +DA A + G EI GR + ++Y E +
Sbjct: 4 EVIVVYDRETRRSRNFGYVTFRDEQDAADAMKQMGGESGKGKEIFGRALNIEYAQEKESS 63
Query: 703 LPLR 714
P R
Sbjct: 64 APRR 67
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +1
Query: 490 TEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRI 669
++++I + F YGP+ V V + GF F F+D DA+ A E G I G+R+
Sbjct: 44 SKREIENEFGYYGPLKDVWVARNPP-----GFAFCIFDDRRDAEDAVRELDGRYICGQRV 98
Query: 670 RVD 678
RV+
Sbjct: 99 RVE 101
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 37.5 bits (83), Expect = 0.011
Identities = 24/74 (32%), Positives = 34/74 (45%)
Frame = +1
Query: 460 LGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNEC 639
L V L ++ F K+G + KV V + GF FV +ED DA+ A E
Sbjct: 6 LYVGNLGRNADSSELERAFEKFGRLSKVWVARNPP-----GFAFVEYEDYRDAEEAVREL 60
Query: 640 TGMEIDGRRIRVDY 681
G + R IRV++
Sbjct: 61 DGANVCDRTIRVEF 74
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +1
Query: 460 LGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNEC 639
L V L+ + E H F K+G + + V+ D T RSRGF F+ F+D + + N
Sbjct: 111 LSVIPLTQASAEGLRQH-FEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNS- 168
Query: 640 TGMEIDGRRI 669
E+DG+++
Sbjct: 169 GAQELDGKKM 178
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +1
Query: 448 PSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIA 627
P L V+ + ++ I +F + G V+KV ++ D + + +GFCFV E+A+ A
Sbjct: 273 PGCTLYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNA 332
Query: 628 KNECTG 645
G
Sbjct: 333 IQTLNG 338
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 36.7 bits (81), Expect = 0.019
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +1
Query: 487 TTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRR 666
TTE + F YG + + + + FV FED DA A EC G E+ G R
Sbjct: 14 TTEDDVRRFFRSYGRLRDINL--------KNNYGFVEFEDDRDADDAVYECNGKEMLGER 65
Query: 667 IRVDY 681
I V++
Sbjct: 66 ILVEH 70
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 571 RSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 675
RSRGF FV F + EDA+ A G E+ GR +++
Sbjct: 97 RSRGFGFVTFANPEDAQTAVKSLNGKEVQGRTLKI 131
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +1
Query: 490 TEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMED 615
T++ + F+KY K ++V D K+ +S+G+ FV F+D D
Sbjct: 229 TDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPND 270
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 36.3 bits (80), Expect = 0.026
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = +1
Query: 466 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTG 645
V + L +E Q+ +F+KYG ++KV+ + R + FVYF E A A + G
Sbjct: 6 VRNVPLPMSETQLKAVFTKYGQIEKVRKI--------RDYGFVYFAKRESAVQAIDGING 57
Query: 646 MEIDGRRIRV 675
IDG ++ V
Sbjct: 58 AYIDGCKLEV 67
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 36.3 bits (80), Expect = 0.026
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +1
Query: 475 LSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEI 654
LS TE+++ +S+YG VD+V+ + D + FV+F + + A A E G E+
Sbjct: 336 LSPSITEEKLKEEYSQYGAVDRVKKLKD--------YAFVHFTERDHALKAIEETDGKEM 387
Query: 655 DGRRI 669
DG +I
Sbjct: 388 DGLKI 392
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 490 TEQQINHIFSKY-GPVDKVQVVIDA-KTGRSRGFCFVYFEDMEDAKIAK 630
++Q+I FSK +D V V + A + G++RGF F+ +E + A +A+
Sbjct: 245 SKQEILEEFSKVTNGLDDVIVYLSADQKGKNRGFAFLEYESHQAASLAR 293
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 35.9 bits (79), Expect = 0.034
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1
Query: 490 TEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRI 669
++++I F +GP+ V V + GF F FED DA+ A E G I G+R
Sbjct: 14 SKREIEREFETFGPLRDVWVARNPP-----GFAFCVFEDRRDAEDAVRELDGRYICGQRA 68
Query: 670 RVD 678
RV+
Sbjct: 69 RVE 71
>SB_14872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1182
Score = 35.9 bits (79), Expect = 0.034
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 487 TTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFED-MEDAKIAKNEC 639
TTE ++ FS +GPV V++V D +TG ++G D + + KN C
Sbjct: 1077 TTELELETFFSNFGPVADVRIVCDRRTGLNKGDAQPKCRDELAKRTVLKNVC 1128
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 35.5 bits (78), Expect = 0.045
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +1
Query: 433 LENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAK---TGRSRGFCFVYFE 603
+++ R L + L +E I I ++G ++ Q + G RG+CFV F+
Sbjct: 380 IDDAVSERKLWIGNLDKRLSEFNILKILQQFGEIEHFQFLFHGNGPNRGEPRGYCFVEFK 439
Query: 604 DMEDAKIAKNECTGMEIDGRRIRVDYP*H 690
EDA+ A + R + VD+ H
Sbjct: 440 KKEDARKALRGLNKKIVLSRALVVDWAHH 468
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 35.5 bits (78), Expect = 0.045
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 571 RSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 675
RSRGF FV E+ ED + + G E +GRR++V
Sbjct: 81 RSRGFGFVTLENQEDLEDVTRKFDGFEYEGRRLKV 115
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 35.1 bits (77), Expect = 0.059
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +1
Query: 502 INHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 675
INH S GP++ V++ D TG+ R F FV F A G+ + R I V
Sbjct: 475 INH--SNAGPLENVRIPTDKNTGQQRSFGFVEFSSPVSVHYASELLDGIRLYDRAINV 530
>SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 35.1 bits (77), Expect = 0.059
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Frame = +1
Query: 529 PVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGME----IDGRRIRVDYP*HSE 696
P+ ++++ D TG SRGFCFV +E+A M IDGR I Y SE
Sbjct: 435 PIYDIRLIKDKVTGTSRGFCFVELATIEEATQLLELIAAMNPPFMIDGRVITTLYARKSE 494
Query: 697 LT-LPLRAST 723
+ +P ST
Sbjct: 495 PSPVPTTKST 504
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 34.7 bits (76), Expect = 0.078
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +1
Query: 436 ENPTPSRCLGVF--GLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDM 609
+ P P R VF + E ++ +F GP+ +V++++D G++RG+ FV +
Sbjct: 66 DRPIPPRGCEVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMDFN-GQNRGYAFVVYTSK 124
Query: 610 EDAKIAKNECTGMEI 654
+DAK EI
Sbjct: 125 DDAKRCVKTLNNYEI 139
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 34.3 bits (75), Expect = 0.10
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +1
Query: 466 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTG 645
V GL +E I +F + GPV V + D T +G+ FV F EDA A
Sbjct: 17 VGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKVMNM 76
Query: 646 MEIDGRRIRVD 678
+++ G+ IRV+
Sbjct: 77 IKVYGKPIRVN 87
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 460 LGVFGLSLYTTEQQINHIFSKYGPVDKV-QVVIDAKTGRSRGFCFVYFEDMEDAKIAKNE 636
L + L E+ + FS +G + + +++ D+ TG S+GF F+ F + + A
Sbjct: 102 LFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEA 161
Query: 637 CTGMEIDGRRIRVDY 681
G + R I V Y
Sbjct: 162 MNGQYLCNRPITVSY 176
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1
Query: 454 RCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRG 582
R L V LS T E + F YG V KV ++ D +TG+S+G
Sbjct: 319 RTLFVDNLSEDTKELDVLRYFRPYGQVAKVHILTDRETGKSKG 361
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 454 RCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRG 582
R + V GL + TEQ + F K+G ++ V+ + + G G
Sbjct: 157 RVIYVGGLPSHFTEQTVREHFKKFGVIEAVKFIENTSVGAKTG 199
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +1
Query: 493 EQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIA 627
+ + +F YG ++ + + I +TG+S+GF +V +E+ E A+ A
Sbjct: 76 KSSLESVFGPYGAIEDLSI-IRTQTGKSKGFGYVTYENAESAQRA 119
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 460 LGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIA 627
L + GL TT+ + + KYG + + ++D T +G+ FV FE A+ A
Sbjct: 102 LYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFESPISAQKA 157
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +1
Query: 496 QQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 675
+ + FSK G V V+++ D + RS+G ++ F D +A +G ++ G I V
Sbjct: 160 RDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKSAVPLAIG-LSGQKLLGAPIMV 218
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1
Query: 538 KVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY 681
+V+VV D +S+GF FV F EDA A E + I G++++ ++
Sbjct: 541 EVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNW 588
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = +1
Query: 454 RCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFE 603
RC + LS EQ + F VD V+V+ D +TGR RGF FV E
Sbjct: 83 RCY-IGNLSYSVDEQALEEKFHDCNVVD-VRVITDRETGRPRGFGFVTLE 130
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/74 (22%), Positives = 38/74 (51%)
Frame = +1
Query: 460 LGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNEC 639
L V GL + + ++ F ++G + + ID + G + + ++ ++ A +A E
Sbjct: 320 LWVGGLGPWISIPELEREFDRFGAIRR----IDYRKGGDHAY--ILYDSLDAASVAAREM 373
Query: 640 TGMEIDGRRIRVDY 681
G ++ RR+R+D+
Sbjct: 374 RGFQMGDRRLRIDF 387
>SB_53239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 32.7 bits (71), Expect = 0.32
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +1
Query: 451 SRCLGVFGLSLYT--TEQQINHIFSKYGPVDKVQVV---IDAKTGRSRGFCFVYFEDMED 615
S L + L ++T E+ + +F KYGP+ V+++ + + R+R FV + +D
Sbjct: 203 SHDLEIRTLQIFTLMNEEMLMRLFGKYGPLASVKIMWPRTEEEKSRNRNCGFVAYMRRKD 262
Query: 616 AKIAKNECTGMEIDGRRIRVDY 681
A TG +I G +++ +
Sbjct: 263 GDKAIKHLTGKDIMGFEMKLGW 284
>SB_34561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 448
Score = 32.7 bits (71), Expect = 0.32
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +1
Query: 511 IFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTGMEIDGRR 666
+FS++G V + V DA +GRS G V F EDA+ A + G+ +D +
Sbjct: 2 LFSEFGQVKRSCVHYDA-SGRSHGTAEVVFVRREDAQQALKQYNGVPLDAAK 52
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +1
Query: 577 RGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRVDY 681
RG+ FV F+D DA+ A ++ G ++ G R+ V++
Sbjct: 722 RGYGFVEFDDHRDAEDAVHDLNGRDLIGERVVVEF 756
Score = 31.5 bits (68), Expect = 0.73
Identities = 26/70 (37%), Positives = 31/70 (44%)
Frame = +1
Query: 466 VFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAKIAKNECTG 645
V LS T+ Q + F KYG V DA R G V FE +D A +
Sbjct: 802 VENLSSRTSWQDLKDYFRKYGKV----TYADAHKKRI-GEGVVEFESKDDLNTAIEKLDD 856
Query: 646 MEIDGRRIRV 675
E+ GRRIRV
Sbjct: 857 TELGGRRIRV 866
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 31.5 bits (68), Expect = 0.73
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +1
Query: 460 LGVFGLSLYTTEQQINHIFSKY--GPVDKVQVVIDAKT--GRSRGFCFVYFEDMED 615
L V GL+ TTE+ + F + G V V AKT G+SR FCFV F + D
Sbjct: 10 LFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPEGKSRKFCFVEFSNGSD 65
>SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1572
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +1
Query: 442 PTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAK 621
PTP +G GL + I +FS YG +++V ++ R + FV ++ +A
Sbjct: 46 PTPHILVGNGGLMCGVDRESITRVFSLYGTLERVVML------PQRSYSFVSYKSHNNAL 99
Query: 622 IAKNECTGMEID 657
A G +D
Sbjct: 100 NAMRNLNGKALD 111
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/86 (25%), Positives = 37/86 (43%)
Frame = +1
Query: 436 ENPTPSRCLGVFGLSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMED 615
E RC G + E+++ +F KYG V +V + + +GF F+ +
Sbjct: 46 ERKFTGRCRLFVGNLIDCDEEEMKEMFKKYGEVAEVFI------NKEKGFGFIRLDTRLH 99
Query: 616 AKIAKNECTGMEIDGRRIRVDYP*HS 693
A+ AK GR +RV + H+
Sbjct: 100 AEAAKAGLDMATRKGRTLRVRFATHA 125
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 571 RSRGFCFVYFEDMEDAKIAKNECTGMEIDGRRIRV 675
R GF FV F +A A+ + G +DGR++ V
Sbjct: 122 RIEGFGFVTFNTAAEANKAREKLNGTIVDGRKVEV 156
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +1
Query: 475 LSLYTTEQQINHIFSKYGPVDKVQVVIDAKTGRSRGFCFVYFEDMEDAK 621
L + + +FS++G V V + G +GF F+ FE + A+
Sbjct: 95 LPFHADHDWLKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAE 143
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,258,408
Number of Sequences: 59808
Number of extensions: 442252
Number of successful extensions: 1151
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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