Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0108
         (731 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   2.4  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           25   3.2  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   4.2  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          24   4.2  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           23   7.4  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +1

Query: 118  SDRERSRSRTRNGSR 162
            S R RSRSR+R+GSR
Sbjct: 1160 SRRSRSRSRSRSGSR 1174


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -3

Query: 693 AVLWIIDADATTVNFHSGAFILCNLSIFHVLKVNEAKPSGTA 568
           ++ WI++ + T +      F + N S F VLKV+E KP+G +
Sbjct: 647 SLTWILENNITGII--DSTFSVENNS-FGVLKVHELKPNGAS 685


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -3

Query: 540 FVNGSILRKDMVYLLFSCIKTKSKNPEAPR 451
           F + S +R  M     SCI   SK  EAPR
Sbjct: 110 FYSKSFVRHSMEATAMSCICLASKIEEAPR 139


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -3

Query: 540 FVNGSILRKDMVYLLFSCIKTKSKNPEAPR 451
           F + S +R  M     SCI   SK  EAPR
Sbjct: 110 FYSKSFVRHSMEATAMSCICLASKIEEAPR 139


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 575 PEGFASFTLRTWKMLRLQRMNAPEWKLTVVASASIIHN 688
           PE   +  LR  K+ R     A E  L+V +S++I+H+
Sbjct: 215 PEDCLAMELRRHKIHRKGVCTASEINLSVGSSSAIVHS 252


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,927
Number of Sequences: 2352
Number of extensions: 13543
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)