Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0107
(385 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20630.1 68414.m02581 catalase 1 identical to catalase 1 GI:2... 97 4e-21
At4g35090.1 68417.m04984 catalase 2 identical to catalase 2 SP:P... 92 1e-19
At1g20620.2 68414.m02577 catalase 3 (SEN2) almost identical to c... 86 9e-18
At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to c... 86 9e-18
At3g59480.1 68416.m06636 pfkB-type carbohydrate kinase family pr... 30 0.61
At1g06020.1 68414.m00630 pfkB-type carbohydrate kinase family pr... 29 1.4
At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to R... 29 1.4
At4g03000.2 68417.m00408 expressed protein contains similarity t... 27 3.3
At4g03000.1 68417.m00407 expressed protein contains similarity t... 27 3.3
At2g46830.2 68415.m05844 myb-related transcription factor (CCA1)... 27 3.3
At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)... 27 3.3
At2g31390.1 68415.m03836 pfkB-type carbohydrate kinase family pr... 27 4.3
At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1... 27 5.7
At1g13740.1 68414.m01613 expressed protein 27 5.7
At3g50870.1 68416.m05570 zinc finger (GATA type) family protein ... 26 7.5
At5g05610.2 68418.m00611 PHD finger family protein contains Pfam... 26 9.9
At5g05610.1 68418.m00610 PHD finger family protein contains Pfam... 26 9.9
At3g58920.1 68416.m06566 F-box family protein contains F-box dom... 26 9.9
At3g25800.1 68416.m03211 serine/threonine protein phosphatase 2A... 26 9.9
At2g19570.1 68415.m02286 cytidine deaminase (CDD) / cytidine ami... 26 9.9
At1g18400.1 68414.m02298 basic helix-loop-helix (bHLH) family pr... 26 9.9
>At1g20630.1 68414.m02581 catalase 1 identical to catalase 1
GI:2511725 from [Arabidopsis thaliana]
Length = 492
Score = 97.1 bits (231), Expect = 4e-21
Identities = 46/76 (60%), Positives = 59/76 (77%)
Frame = +3
Query: 138 DSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVHAKGAGA 317
DSP F TT SGAPV + TVG GP LL+D + L+++++FDRERIPERVVHA+GA A
Sbjct: 13 DSP-FFTTNSGAPVWNNNSSLTVGTRGPILLEDYHLLEKLANFDRERIPERVVHARGASA 71
Query: 318 FGYFEVTHDITKYSAA 365
G+FEVTHDIT+ ++A
Sbjct: 72 KGFFEVTHDITQLTSA 87
>At4g35090.1 68417.m04984 catalase 2 identical to catalase 2
SP:P25819, GI:17865693 from [Arabidopsis thaliana]
Length = 492
Score = 92.3 bits (219), Expect = 1e-19
Identities = 43/76 (56%), Positives = 57/76 (75%)
Frame = +3
Query: 138 DSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVHAKGAGA 317
+SP F TT SGAPV + TVG GP LL+D + ++++++FDRERIPERVVHA+GA A
Sbjct: 13 NSP-FFTTNSGAPVWNNNSSMTVGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASA 71
Query: 318 FGYFEVTHDITKYSAA 365
G+FEVTHDI+ + A
Sbjct: 72 KGFFEVTHDISNLTCA 87
>At1g20620.2 68414.m02577 catalase 3 (SEN2) almost identical to
catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis
thaliana]; identical to catalase 3 (SEN2) mRNA, partial
cds GI:3158369
Length = 427
Score = 85.8 bits (203), Expect = 9e-18
Identities = 38/82 (46%), Positives = 56/82 (68%)
Frame = +3
Query: 120 YKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVH 299
Y+ + + F TT GAPV + T+G+ GP LL+D + ++++++F RERIPERVVH
Sbjct: 6 YRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRERIPERVVH 65
Query: 300 AKGAGAFGYFEVTHDITKYSAA 365
A+G A G+FEVTHDI+ + A
Sbjct: 66 ARGISAKGFFEVTHDISNLTCA 87
>At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to
catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis
thaliana]; identical to catalase 3 (SEN2) mRNA, partial
cds GI:3158369
Length = 492
Score = 85.8 bits (203), Expect = 9e-18
Identities = 38/82 (46%), Positives = 56/82 (68%)
Frame = +3
Query: 120 YKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVH 299
Y+ + + F TT GAPV + T+G+ GP LL+D + ++++++F RERIPERVVH
Sbjct: 6 YRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRERIPERVVH 65
Query: 300 AKGAGAFGYFEVTHDITKYSAA 365
A+G A G+FEVTHDI+ + A
Sbjct: 66 ARGISAKGFFEVTHDISNLTCA 87
>At3g59480.1 68416.m06636 pfkB-type carbohydrate kinase family
protein contains Pfam profile: PF00294 pfkB family
carbohydrate kinase
Length = 326
Score = 29.9 bits (64), Expect = 0.61
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 129 TLKDSPGFITTKSGAPVGIKTAIQTVG 209
+L D+PGFI GAP + AI +G
Sbjct: 29 SLADAPGFIKAPGGAPANVAIAISRLG 55
>At1g06020.1 68414.m00630 pfkB-type carbohydrate kinase family
protein similar to fructokinase GI:2102693 from
[Lycopersicon esculentum]
Length = 345
Score = 28.7 bits (61), Expect = 1.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 129 TLKDSPGFITTKSGAPVGIKTAIQTVG 209
+L +SPGF+ GAP + A+ +G
Sbjct: 29 SLSESPGFLKAPGGAPANVAIAVSRLG 55
>At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to RNA
helicase SDE3 [Arabidopsis thaliana] GI:13811296
Length = 1002
Score = 28.7 bits (61), Expect = 1.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 167 WSSCWNQNGDTNGGQEWS 220
WS WN NG T EWS
Sbjct: 868 WSDGWNNNGGTKEKNEWS 885
Score = 27.1 bits (57), Expect = 4.3
Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +2
Query: 167 WSSCWNQNGDTNG-GQEWSS 223
WS W+ NG TNG QE SS
Sbjct: 901 WSDGWDNNGGTNGINQEGSS 920
>At4g03000.2 68417.m00408 expressed protein contains similarity to
hypothetical proteins
Length = 814
Score = 27.5 bits (58), Expect = 3.3
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -1
Query: 316 APAPLACTTRSGIRSLSKDDISSRKLTSCNKAGPFLPTVCIAVLIPTGAPDLVVMK 149
APAP+A +SG K +S++ A P+ T + + IP D +++K
Sbjct: 417 APAPVASEKKSGSEPEEKPSVSTKPAPDYYAAIPYDAT--LGIYIPRNKRDELILK 470
>At4g03000.1 68417.m00407 expressed protein contains similarity to
hypothetical proteins
Length = 814
Score = 27.5 bits (58), Expect = 3.3
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -1
Query: 316 APAPLACTTRSGIRSLSKDDISSRKLTSCNKAGPFLPTVCIAVLIPTGAPDLVVMK 149
APAP+A +SG K +S++ A P+ T + + IP D +++K
Sbjct: 417 APAPVASEKKSGSEPEEKPSVSTKPAPDYYAAIPYDAT--LGIYIPRNKRDELILK 470
>At2g46830.2 68415.m05844 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 526
Score = 27.5 bits (58), Expect = 3.3
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -1
Query: 280 IRSLSKDDISSRKLTSCNKAGPFLPTVCIAVLIPTGA 170
+R S D++++ L + N+ GP + I VL+P G+
Sbjct: 119 VRKESNSDLNAKSLENGNEQGPQTYPMHIPVLVPLGS 155
>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 608
Score = 27.5 bits (58), Expect = 3.3
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -1
Query: 280 IRSLSKDDISSRKLTSCNKAGPFLPTVCIAVLIPTGA 170
+R S D++++ L + N+ GP + I VL+P G+
Sbjct: 201 VRKESNSDLNAKSLENGNEQGPQTYPMHIPVLVPLGS 237
>At2g31390.1 68415.m03836 pfkB-type carbohydrate kinase family
protein contains Pfam profile: PF00294 pfkB family
carbohydrate kinase
Length = 325
Score = 27.1 bits (57), Expect = 4.3
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 129 TLKDSPGFITTKSGAPVGIKTAIQTVG 209
+L ++PGF+ GAP + A+ +G
Sbjct: 28 SLAEAPGFLKAPGGAPANVAIAVSRLG 54
>At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1
(KTN1) [Arabidopsis thaliana] GI:14133602
Length = 523
Score = 26.6 bits (56), Expect = 5.7
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 304 LACTTRSGIRSLSKDDISSRKLTSCN 227
+A TR I+++SKDDIS+ + C+
Sbjct: 468 IAGKTRDEIKNMSKDDISNDPVAMCD 493
>At1g13740.1 68414.m01613 expressed protein
Length = 348
Score = 26.6 bits (56), Expect = 5.7
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +3
Query: 3 WRARGPSESLRGIKQRTPHSKKGTYKMASRDPATDQLINYKKTLKDSPGFI 155
WR R +SLR ++ + +K ++++ + D T N + GF+
Sbjct: 121 WRKRKEMQSLRRMEAKRRRCEKQSFRVGNSDDQTVSFENERWVTASKSGFL 171
>At3g50870.1 68416.m05570 zinc finger (GATA type) family protein
Arabidopsis thaliana mRNA for GATA transcription factor
3, PID:e1254739
Length = 295
Score = 26.2 bits (55), Expect = 7.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 149 FHHH*IWSSCWNQNGDTNGG 208
FHHH S C+N N ++N G
Sbjct: 21 FHHH-SQSCCYNNNNNSNAG 39
>At5g05610.2 68418.m00611 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 241
Score = 25.8 bits (54), Expect = 9.9
Identities = 14/66 (21%), Positives = 35/66 (53%)
Frame = +3
Query: 57 HSKKGTYKMASRDPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQD 236
+ +K + + + P +++ +K +KD + S + G+K +I+ K+ P L+++
Sbjct: 115 NERKRLFSLINDLPTLFEVVTGRKPIKDGKPSMDLGSKSRNGVKRSIEGQTKSTPKLMEE 174
Query: 237 VNFLDE 254
++ DE
Sbjct: 175 -SYEDE 179
>At5g05610.1 68418.m00610 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 241
Score = 25.8 bits (54), Expect = 9.9
Identities = 14/66 (21%), Positives = 35/66 (53%)
Frame = +3
Query: 57 HSKKGTYKMASRDPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQD 236
+ +K + + + P +++ +K +KD + S + G+K +I+ K+ P L+++
Sbjct: 115 NERKRLFSLINDLPTLFEVVTGRKPIKDGKPSMDLGSKSRNGVKRSIEGQTKSTPKLMEE 174
Query: 237 VNFLDE 254
++ DE
Sbjct: 175 -SYEDE 179
>At3g58920.1 68416.m06566 F-box family protein contains F-box domain
Pfam:PF00646
Length = 470
Score = 25.8 bits (54), Expect = 9.9
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = -1
Query: 304 LACTTRSGIRSLSKDDISSRKLTSCNKAGPFLPTVCIAVLIPTGAPDLVVMKPGE 140
L TTR SL D RKL + GP + C+ ++ G DL + GE
Sbjct: 66 LPVTTRISKFSLRFDSFLKRKLETGLVIGPHVVNRCLCNVLKRGVLDLKLEIYGE 120
>At3g25800.1 68416.m03211 serine/threonine protein phosphatase 2A
(PP2A) 65 KDa regulatory subunit A identical to protein
phosphatase 2A 65 kDa regulatory subunit (pDF1)
GI:683502 from [Arabidopsis thaliana]
Length = 587
Score = 25.8 bits (54), Expect = 9.9
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -1
Query: 325 YPKAPAPLACTTRSGIRSLSKDDISSRKLTSCNKAGPFLPTV 200
YP AP L RS L +DD+ + + G F TV
Sbjct: 153 YPSAPDMLKTELRSLYTQLCQDDMPMVRRAAATNLGKFAATV 194
>At2g19570.1 68415.m02286 cytidine deaminase (CDD) / cytidine
aminohydrolase identical to cytidine deaminase (CDD)
[Arabidopsis thaliana] GI:3046700
Length = 301
Score = 25.8 bits (54), Expect = 9.9
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 1 GGGHEGPVSRSVVLNNERRIVRREHT-KWLQET 96
GGG+E V +V++ E +VR+EHT + L ET
Sbjct: 255 GGGYERIVG-AVLVEKEDAVVRQEHTARLLLET 286
>At1g18400.1 68414.m02298 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 260
Score = 25.8 bits (54), Expect = 9.9
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 21 SESLRGIKQRTPHSKKGTYKMASRDPATDQLINYKKTLKDSPGFITTK 164
+E LR ++ P G YK D++INY ++L++ F++ K
Sbjct: 168 NERLRCLQDMVP----GCYKAMGMATMLDEIINYVQSLQNQVEFLSMK 211
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,716,406
Number of Sequences: 28952
Number of extensions: 168080
Number of successful extensions: 453
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 537681456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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