Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0104
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    24   1.0  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    24   1.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   4.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.7  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   9.7  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   9.7  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   9.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.7  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   9.7  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = -1

Query: 499 VRSVTNPENNEASIEHSHHTVDTGLD-QPIESHRNTRDLRFLYPRGKLPVPTLPPFNPKP 323
           ++   N   N+ +++H     ++ L  Q + S+ N   +  + P G +   T+P + P P
Sbjct: 97  LKKCQNVGMNKDAVQHERGPRNSTLRRQQMSSYYNESRV-MMSPPGNVLNLTMPKYEPNP 155

Query: 322 IYIDMG 305
             ID G
Sbjct: 156 SIIDPG 161


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = -1

Query: 499 VRSVTNPENNEASIEHSHHTVDTGLD-QPIESHRNTRDLRFLYPRGKLPVPTLPPFNPKP 323
           ++   N   N+ +++H     ++ L  Q + S+ N   +  + P G +   T+P + P P
Sbjct: 97  LKKCQNVGMNKDAVQHERGPRNSTLRRQQMSSYYNESRV-MMSPPGNVLNLTMPKYEPNP 155

Query: 322 IYIDMG 305
             ID G
Sbjct: 156 SIIDPG 161


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/34 (23%), Positives = 17/34 (50%)
 Frame = -1

Query: 553 PILPSKIDDVQLDPNRRYVRSVTNPENNEASIEH 452
           PI     DD+  +    + +S+TN   +  +++H
Sbjct: 284 PIWTRNADDISQEEYGEFYKSLTNDWEDHLAVKH 317


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 231 GTFSKNRESSRNKRFRSAR 175
           GTFS    S R+  FR+ R
Sbjct: 380 GTFSTTANSCRSSTFRNNR 398


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +2

Query: 413 DRLVKSSINCMM 448
           DRL+K+ +NC++
Sbjct: 38  DRLLKNYVNCLL 49


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +2

Query: 413 DRLVKSSINCMM 448
           DRL+K+ +NC++
Sbjct: 40  DRLLKNYVNCLL 51


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 413 DRLVKSSINCMM 448
           DRL+K+  NC+M
Sbjct: 40  DRLLKNYFNCLM 51


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 397 TRDLRFLYPRGKLPVPTLPP 338
           TR   + +P G+ P P L P
Sbjct: 160 TRPPMYPFPAGQYPYPILSP 179


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 397 TRDLRFLYPRGKLPVPTLPP 338
           TR   + +P G+ P P L P
Sbjct: 52  TRPPMYPFPAGQYPYPILSP 71


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +2

Query: 413 DRLVKSSINCMM 448
           DRL+K+ +NC++
Sbjct: 38  DRLLKNYVNCLL 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,765
Number of Sequences: 336
Number of extensions: 4022
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)