Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0104
(703 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036) 33 0.22
SB_49132| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09) 33 0.22
SB_41062| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31) 31 0.68
SB_6685| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31) 31 0.68
SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_36576| Best HMM Match : FerB (HMM E-Value=9) 31 1.2
SB_30900| Best HMM Match : Extensin_2 (HMM E-Value=0.17) 30 1.6
SB_22048| Best HMM Match : RHS_repeat (HMM E-Value=0.00058) 30 2.1
SB_32532| Best HMM Match : RHS_repeat (HMM E-Value=3.2e-06) 29 2.8
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 29 2.8
SB_48964| Best HMM Match : TRAP_240kDa (HMM E-Value=0) 29 3.6
SB_12928| Best HMM Match : Sulfotransfer_1 (HMM E-Value=9.3e-10) 29 3.6
SB_33706| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_26758| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40) 29 4.8
SB_8542| Best HMM Match : PT (HMM E-Value=4) 29 4.8
SB_48195| Best HMM Match : DUF229 (HMM E-Value=0) 28 6.4
SB_19358| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_48760| Best HMM Match : bZIP_1 (HMM E-Value=0.95) 28 8.4
SB_35622| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 8.4
SB_1787| Best HMM Match : Peptidase_S9 (HMM E-Value=1.5e-08) 28 8.4
>SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036)
Length = 1136
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = -1
Query: 589 DNVPRAPSTADHPI--LPSKIDDV--QLDPNRRYVRSVTNPENNEASIEHS-HHTVDTGL 425
+ + RA ADH I + K+D QLD N +Y++ + NP+ + ++ V
Sbjct: 253 EEIERAKVAADHLISEVKDKLDIAKEQLDDNAKYIKCLENPDEADKYVKQKIQQRVKRTA 312
Query: 424 DQPIESHR 401
+ +ESHR
Sbjct: 313 ENLVESHR 320
>SB_49132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 10/69 (14%)
Frame = +3
Query: 501 YLRFGSSC-TSSIFEG---RIG-WSA-----VLGARGTLSP*YSHSGSWPACRTVRVIGR 650
++ FG SC I G +G W + ++ G +S H GSW +CR + ++
Sbjct: 78 HVEFGGSCRVLGIMSGCGNHVGSWESCRVVGIMSGCGIMSSPGDHVGSWGSCRVLGIMSG 137
Query: 651 CVGGGL*VG 677
C GGGL +G
Sbjct: 138 C-GGGLRIG 145
>SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09)
Length = 1487
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = -1
Query: 589 DNVPRAPSTADHPI--LPSKIDDV--QLDPNRRYVRSVTNPENNEASIEHS-HHTVDTGL 425
+ + RA ADH I + K+D QLD N +Y++ + NP+ + ++ V
Sbjct: 229 EEIERAKVAADHLISEVKDKLDIAKEQLDDNAKYIKCLENPDEADKYVKQKIQQRVKRTA 288
Query: 424 DQPIESHR 401
+ +ESHR
Sbjct: 289 ENLVESHR 296
>SB_41062| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31)
Length = 147
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -3
Query: 587 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQCHQSRK 474
QC+ C KY R S S ++R + KP C +C + K
Sbjct: 6 QCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYK 43
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -3
Query: 587 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQCHQSRK 474
QC+ C KY R S S ++R + KP C +C + K
Sbjct: 62 QCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYK 99
>SB_6685| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31)
Length = 147
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -3
Query: 587 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQCHQSRK 474
QC+ C KY R S S ++R + KP C +C + K
Sbjct: 6 QCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYK 43
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -3
Query: 587 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQCHQSRK 474
QC+ C KY R S S ++R + KP C +C + K
Sbjct: 62 QCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYK 99
>SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 587 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQC 489
QCS+C+K S S + R + KP +CS C
Sbjct: 762 QCSTCSKSYSTSRSLVRHERSHSSEKPYLCSDC 794
>SB_36576| Best HMM Match : FerB (HMM E-Value=9)
Length = 223
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +2
Query: 518 ELHVVDFRRKNRMVCSTWRTRNIVTLIQP*RFLASLSHCTCYRALCWRW 664
ELH+ FRR+NRM R+I++ F +CT Y+ +CW++
Sbjct: 64 ELHM--FRRENRMAGKQLPARDILS------FENKRRNCTVYKCVCWQY 104
>SB_30900| Best HMM Match : Extensin_2 (HMM E-Value=0.17)
Length = 473
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = -1
Query: 484 NPENNEASIEHSHHTVDTGLDQPIESHRNTRDLRFLYPRGKLPVPTLPPFNPKPIYIDMG 305
+PEN++ + H V + L P + +TR +P LP P+LP P I D
Sbjct: 24 SPENSDTLYHYCRHLVPS-LPTPGTTTADTRHHHCRHPAPSLPAPSLPA--PGTITADTW 80
Query: 304 NRYRRH 287
+ RH
Sbjct: 81 YHHCRH 86
>SB_22048| Best HMM Match : RHS_repeat (HMM E-Value=0.00058)
Length = 820
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 376 YPRGKLPVPTLPPFNPKPIYIDMGNRYRRHASEDQEELRHY 254
YP G L P NP+P Y GN R+ + + R+Y
Sbjct: 378 YPSGNLQSRYYPSGNPQPRYYPSGNPQPRYYTSGNPQPRYY 418
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -1
Query: 376 YPRGKLPVPTLPPFNPKPIYIDMGNRYRRHASEDQEELRHY 254
YP G L P NP+P Y GN R+ + R+Y
Sbjct: 198 YPSGNLQSRYYPSGNPQPRYYPSGNPQSRYYPSGNLQSRYY 238
>SB_32532| Best HMM Match : RHS_repeat (HMM E-Value=3.2e-06)
Length = 618
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -1
Query: 376 YPRGKLPVPTLPPFNPKPIYIDMGNRYRRHASEDQEELRHY 254
YP G L P NP+P Y GN R+ + R+Y
Sbjct: 51 YPSGNLQSRYYPSGNPQPRYYPSGNPQSRYYPSGNPQPRYY 91
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 29.5 bits (63), Expect = 2.8
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 7/103 (6%)
Frame = -1
Query: 514 PNRRYVRSVTNPENNEASIEHSHHTVDTGLDQPIESHRNTRDLRFLYPRGKLPVPTLP-- 341
P+ RY R ++ P + ++H +D P E +R+ R Y R LP P P
Sbjct: 193 PHERYGRPLSPPRRGDPYLDHYDRPLDP--YPPRERYRDEPPPRDAYGRHDLPPPRDPYD 250
Query: 340 -----PFNPKPIYIDMGNRYRRHASEDQEELRHYDEHFLIPRD 227
P+ P Y D + R D + R YD++ PRD
Sbjct: 251 RERRDPYERDP-YYDHRDDPRDDPRRD-DPYRRYDDY---PRD 288
>SB_48964| Best HMM Match : TRAP_240kDa (HMM E-Value=0)
Length = 1227
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Frame = -2
Query: 627 DKLARNRYGCIKVTMFLVRQVLQTIRFFLRKSTT------CSSIQTEGMFAVSPIQKI 472
D ++R+R C+ V + ++ Q+ L + T C+S+ G+ AVS I KI
Sbjct: 890 DPVSRDRRSCLPVHLCILSQLYDAFSVLLDSTETAYLSVGCASVMCLGLCAVSAIMKI 947
>SB_12928| Best HMM Match : Sulfotransfer_1 (HMM E-Value=9.3e-10)
Length = 221
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = -1
Query: 538 KIDDVQLDPNRRYVRSVTNPENNEASIEHSHHTVDT--GLDQP--IESHRNTRDLRFLYP 371
KID+ Q+D +++ ++ P + A+ + + + T GL +P +++H N + +
Sbjct: 78 KIDETQIDKKVKFLDTMFIPAD-PANPKTPNDVIKTFQGLPRPRLLKTHLNYQYVPMGED 136
Query: 370 RGKLPVPTLPPFNPKPIYIDMGNRY 296
RG P + NPK ++ N Y
Sbjct: 137 RGSAPKTIVVMRNPKDAFVSYFNHY 161
>SB_33706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 969
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 636 VQCDKLARNRYGCIKVTMFLVRQVLQTIRFFLRKSTTCSSIQ 511
++CDK+ R+ K TM + R +R + K+ T S++Q
Sbjct: 674 IKCDKIQTGRFVYPKNTMMIPRHFQVGLRIYAGKNETLSTLQ 715
>SB_26758| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40)
Length = 1413
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = -2
Query: 540 RKSTTCSSIQTEGMFAVSPIQKITRRPLN--IH-IIQLILDLTSRSRATVTQGTCGFCTL 370
RK++T SS + A P Q + P + +H I+ L+L LTS + T++QG+ + +
Sbjct: 297 RKASTASSHSSSFRLAKKP-QHVCSNPPSCLLHSIVALLLCLTSDGQLTLSQGSANWSSA 355
Query: 369 EGNC 358
+C
Sbjct: 356 LQSC 359
>SB_8542| Best HMM Match : PT (HMM E-Value=4)
Length = 650
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -1
Query: 376 YPRGKLPVPTLPPF-NPKPIYIDMGNRYRRHASEDQEELRHY 254
YP G P P+ PF NP+P Y GN ++ + R+Y
Sbjct: 297 YPSGN-PQPSYYPFGNPQPRYYPYGNPQPKYYPSGNPQSRYY 337
>SB_48195| Best HMM Match : DUF229 (HMM E-Value=0)
Length = 1743
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -2
Query: 399 TQGTCGFCTLEGNCLFQRFLRLTPSQ 322
T GTC F + G LF R LRL PSQ
Sbjct: 230 TSGTCVFLFIFG-ILFDRHLRLRPSQ 254
>SB_19358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -2
Query: 534 STTCSSIQTEGMFAVSPIQK 475
STTCS++ T G +A++P +K
Sbjct: 89 STTCSAVTTVGGYAITPFRK 108
>SB_48760| Best HMM Match : bZIP_1 (HMM E-Value=0.95)
Length = 221
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 523 QLDPNRRYVRSVTNPENNEASIEHS-HHTVDTGLDQPIESHR 401
QLD N +Y++ + NP+ + ++ V + +ESHR
Sbjct: 134 QLDDNAKYIKCLENPDEADKYVKQKIQQRVKRTAENLVESHR 175
>SB_35622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 523 QLDPNRRYVRSVTNPENNEASIEHS-HHTVDTGLDQPIESHR 401
QLD N +Y++ + NP+ + ++ V + +ESHR
Sbjct: 134 QLDDNAKYIKCLENPDEADKYVKQKIQQRVKRTAENLVESHR 175
>SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 594
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 584 CSSCAKYCRPSDSSFENRRRAARSKPKVCSQC 489
C C K R S ++R+ +KP VC +C
Sbjct: 440 CEICGKGLRTKSSLRDHRKTHTDNKPFVCEEC 471
>SB_1787| Best HMM Match : Peptidase_S9 (HMM E-Value=1.5e-08)
Length = 1057
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -1
Query: 604 WLYQGDNVPRAPSTADHPILPSKIDDVQLDPNRRYVRSVTNPENNEASIEHSHHTVDTG 428
+LY PR PS+A+ + ++D+ QL RR +R + I+ S + +G
Sbjct: 703 YLYASSASPRHPSSANDEVQSLRLDNAQL---RRNLRMANEKLQEQREIQQSLEELKSG 758
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,419,311
Number of Sequences: 59808
Number of extensions: 505851
Number of successful extensions: 1633
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1621
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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