Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0104
         (703 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    26   0.40 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   2.1  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              23   3.7  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              23   3.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   6.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   6.5  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   8.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.6  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.6  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 25.8 bits (54), Expect = 0.40
 Identities = 9/39 (23%), Positives = 23/39 (58%)
 Frame = +3

Query: 123 NYKIY*VSINNYVSMNIGAHSEIFCFWNFPYSWKMSLGI 239
           NY ++ ++I++ + + +G  +E+  FW   Y W + + +
Sbjct: 76  NYYLFSLAISDLILLVLGLPNELSLFWQ-QYPWVLGVSL 113


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = -3

Query: 587 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQCHQS 480
           QC  C+K     ++   +RR   + +P  C  C ++
Sbjct: 121 QCEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERA 156



 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = -3

Query: 587 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQC 489
           +C+ C+K    S     + R     KP VC  C
Sbjct: 177 KCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKAC 209


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = -1

Query: 277 DQEELRHYDEHFLIPRDIFQE*GKFQKQKISECAPIFIE 161
           + E+ + Y+E  L   +I  E G F++  + E   I+++
Sbjct: 55  EDEKPQRYNECILKQFNIVDESGNFKENIVQELTSIYLD 93


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = -1

Query: 277 DQEELRHYDEHFLIPRDIFQE*GKFQKQKISECAPIFIE 161
           + E+ + Y+E  L   +I  E G F++  + E   I+++
Sbjct: 55  EDEKPQRYNECILKQFNIVDESGNFKENIVQELTSIYLD 93


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = -2

Query: 294 DDMRRRIKKNCGIMMSTF*FRGTFSKNRESSRNKRFRSAR 175
           DD+R+++  +  +++++   +G       S+RNK+  SAR
Sbjct: 561 DDLRQKVLPDGTLVITSVQKKGDAGVYTCSARNKQGHSAR 600


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = -2

Query: 294 DDMRRRIKKNCGIMMSTF*FRGTFSKNRESSRNKRFRSAR 175
           DD+R+++  +  +++++   +G       S+RNK+  SAR
Sbjct: 561 DDLRQKVLPDGTLVITSVQKKGDAGVYTCSARNKQGHSAR 600


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +3

Query: 171 IGAHSEIFCFWNFPYSWK 224
           I  H +    WN+ Y WK
Sbjct: 617 INPHQQHLDQWNWVYEWK 634


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 550 SDGLQYLAHEEHCHLDTA 603
           + G+QYLA   + H D A
Sbjct: 745 ASGMQYLAEMNYVHRDLA 762


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -3

Query: 680 PADLQATANTAPDNTYSATSWPGTAM 603
           P   Q     A  N YS T WP T++
Sbjct: 762 PQGSQGLLQCATSN-YSTTRWPATSV 786


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,186
Number of Sequences: 438
Number of extensions: 5184
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)