Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0102
         (583 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    25   2.4  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   5.5  

>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -2

Query: 552 NITVGHSTNKVGKHCYRRIQEAWT 481
           N +    T +VG+HC +++ + W+
Sbjct: 107 NTSASTVTQQVGRHCDQQMMDGWS 130


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 232 HQFYPEKLIILFLTVLEL 285
           H  +P KLI+++L  LEL
Sbjct: 192 HVKHPHKLIVMYLKYLEL 209


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,203
Number of Sequences: 2352
Number of extensions: 12742
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)