Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0102
         (583 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           21   6.7  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    21   8.9  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   8.9  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   8.9  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   8.9  

>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 525 KVGKHCYRRIQEAWTTIFEE 466
           KVG HC +  Q    +++E+
Sbjct: 84  KVGVHCMKTTQAVVVSLYED 103


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 134 FQFCYMNIKVCFIQAEYLDYEK 199
           FQ   M+I++C I  E   Y K
Sbjct: 120 FQLYPMDIQICPIYIESFSYHK 141


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -2

Query: 93  DDGKTMVTINHKLNYICFFPRAEFLQPGD 7
           D     VTIN++L  + F    + + PG+
Sbjct: 148 DSDVIFVTINYRLGILGFLSTEDEVVPGN 176


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -2

Query: 93  DDGKTMVTINHKLNYICFFPRAEFLQPGD 7
           D     VTIN++L  + F    + + PG+
Sbjct: 19  DSDVIFVTINYRLGILGFLSTEDEVVPGN 47


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -2

Query: 93  DDGKTMVTINHKLNYICFFPRAEFLQPGD 7
           D     VTIN++L  + F    + + PG+
Sbjct: 148 DSDVIFVTINYRLGILGFLSTEDEVVPGN 176


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,422
Number of Sequences: 438
Number of extensions: 3493
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)