Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0101
         (523 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0125 - 20356683-20357071,20359531-20362285                       27   6.9  
07_01_1154 - 10850206-10850318,10850528-10850658,10850998-108511...    27   6.9  

>11_06_0125 - 20356683-20357071,20359531-20362285
          Length = 1047

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 8/19 (42%), Positives = 17/19 (89%)
 Frame = -2

Query: 369 FSGAVPINLFKLNKLTLTI 313
           F+G++P+ +FK++ L+LT+
Sbjct: 505 FTGSIPVEIFKIHTLSLTL 523


>07_01_1154 -
           10850206-10850318,10850528-10850658,10850998-10851110,
           10851221-10851307,10852873-10853000,10853132-10853210,
           10853262-10853354,10854211-10854295,10855000-10855085,
           10855183-10855375,10856891-10856970
          Length = 395

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +1

Query: 226 QI*PFFANYLLPFAKHCSFAS-KNKI 300
           Q+  FF  + L F+KHCS+   KN++
Sbjct: 149 QLLNFFCEFFLNFSKHCSYTDIKNEV 174


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,560,745
Number of Sequences: 37544
Number of extensions: 198516
Number of successful extensions: 378
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 378
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)