Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0101
         (523 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075480-1|ABF85763.1|  157|Drosophila melanogaster RE38359p pro...    29   5.1  
AY089442-1|AAL90180.1|  459|Drosophila melanogaster AT26079p pro...    28   6.7  
AE014134-1987|AAF53031.3|  459|Drosophila melanogaster CG7309-PA...    28   6.7  

>AY075480-1|ABF85763.1|  157|Drosophila melanogaster RE38359p
           protein.
          Length = 157

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 235 VKFGNFEFFNMLSFL*LKGVKNRIAILKKKK 143
           +KFG+ EF N  ++L +K +K R    KKKK
Sbjct: 127 IKFGSLEFKNNQTYLHIKRIKCRKCREKKKK 157


>AY089442-1|AAL90180.1|  459|Drosophila melanogaster AT26079p
           protein.
          Length = 459

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = -2

Query: 354 PINLFKLNKLTLTILF*LYFVLTRKTAMLREWQKVIRKKRSNLAISSFLICYLFF 190
           P  ++ +  L+L +L  L  V TRK  +   W  +  K  S L+++   +  LFF
Sbjct: 231 PWGIYPILALSLILLMFL-LVATRKPRIFTGWDSINYKAESGLSVAGIGMSILFF 284


>AE014134-1987|AAF53031.3|  459|Drosophila melanogaster CG7309-PA
           protein.
          Length = 459

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = -2

Query: 354 PINLFKLNKLTLTILF*LYFVLTRKTAMLREWQKVIRKKRSNLAISSFLICYLFF 190
           P  ++ +  L+L +L  L  V TRK  +   W  +  K  S L+++   +  LFF
Sbjct: 231 PWGIYPILALSLILLMFL-LVATRKPRIFTGWDSINYKAESGLSVAGIGMSILFF 284


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,180,862
Number of Sequences: 53049
Number of extensions: 363020
Number of successful extensions: 683
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)