Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0101
         (523 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    27   0.12 
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    27   0.12 
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    27   0.12 
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   4.4  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   4.4  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 385 ISDGIARNKIETRIILLDTILCCHGCNNS 471
           I D I  N++E RII   T+ C HG  +S
Sbjct: 16  IRDRIGDNELEERIIYPGTLWCGHGNKSS 44


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 385 ISDGIARNKIETRIILLDTILCCHGCNNS 471
           I D I  N++E RII   T+ C HG  +S
Sbjct: 21  IRDRIGDNELEERIIYPGTLWCGHGNKSS 49


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 385 ISDGIARNKIETRIILLDTILCCHGCNNS 471
           I D I  N++E RII   T+ C HG  +S
Sbjct: 21  IRDRIGDNELEERIIYPGTLWCGHGNKSS 49


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -2

Query: 279 TAMLREWQKVIRKKRSNLAISSFLICYLFF 190
           TA + EW +++R KR  L I+  ++C++ +
Sbjct: 401 TAAVDEWPRLLR-KRKELFIA--IVCFVSY 427


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -2

Query: 279 TAMLREWQKVIRKKRSNLAISSFLICYLFF 190
           TA + EW +++R KR  L I+  ++C++ +
Sbjct: 454 TAAVDEWPRLLR-KRKELFIA--IVCFVSY 480


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,113
Number of Sequences: 438
Number of extensions: 3004
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)