Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0099
(638 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23388| Best HMM Match : ParBc (HMM E-Value=0.3) 35 0.064
SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09) 34 0.085
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.085
SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037) 32 0.34
SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43) 31 1.0
SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15) 29 4.2
SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5) 29 4.2
SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0) 29 4.2
SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_2413| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_7463| Best HMM Match : Ank (HMM E-Value=0) 28 5.6
SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_22747| Best HMM Match : 7tm_1 (HMM E-Value=3.1e-06) 28 7.4
SB_53672| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42) 28 7.4
SB_27122| Best HMM Match : I-set (HMM E-Value=1.9e-39) 27 9.7
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 27 9.7
SB_36542| Best HMM Match : Pox_A_type_inc (HMM E-Value=7.3e-11) 27 9.7
>SB_23388| Best HMM Match : ParBc (HMM E-Value=0.3)
Length = 1168
Score = 34.7 bits (76), Expect = 0.064
Identities = 17/61 (27%), Positives = 36/61 (59%)
Frame = +1
Query: 454 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 633
++EEK++RL+ E+ + ++ +A K+ASK+ + T + +S N ++ K ++E
Sbjct: 427 EVEEKKRRLQRYERLQSSLNEAYKEASKSSVDGT-RDESRNEEITQTSCNETSGKTPIKE 485
Query: 634 E 636
E
Sbjct: 486 E 486
>SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09)
Length = 787
Score = 34.3 bits (75), Expect = 0.085
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = +1
Query: 460 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 636
+ ++ L + EKK Q ML+ K A+K P F ++ +EN G A+ N +++LEEE
Sbjct: 607 QRNKEALAKKEKKIQEMLEEEKKATKFEP-FNLE--TENRGSVKAEKWLNSVQQELEEE 662
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 34.3 bits (75), Expect = 0.085
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +1
Query: 457 IEEKRQRLEEAEKKRQAMLQAMKDA 531
+EE+R+RLE EK+RQA QAM++A
Sbjct: 319 LEEERKRLENLEKERQAAQQAMQEA 343
>SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037)
Length = 703
Score = 32.3 bits (70), Expect = 0.34
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +1
Query: 457 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 633
+EE+R+R EEAEKKR+ + ++ + + KK E L QLER K +++ E
Sbjct: 252 MEEERKRKEEAEKKREEEERKRREEEEAAQKW---KKEEL--LRQQQLEREKEEQERAE 305
>SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)
Length = 1806
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +1
Query: 460 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSEN 576
EE+RQ+ EEA K+R+ L A K++SK+ +++S N
Sbjct: 1344 EERRQKREEARKRREEKL-AKKESSKSSNKRKSKERSGN 1381
>SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15)
Length = 924
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 460 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKK-SENFGLSNAQLERNKTKEQLEE 633
EE+R++ EEAE++R+ + K + +QK+ E Q + + K+++ E
Sbjct: 636 EERRRQQEEAERQRREQEEVFKQQEQQRQQLELQKRQQEQQRQQELQKRQQEEKQRMAE 694
>SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5)
Length = 435
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 533 ARPDPTSPSKRRAKTSV*AMPSWSATRPRSSWKR 634
ARP P+ +K KT MP S P+SSW R
Sbjct: 290 ARPRPSCKTKPSPKTKT--MPPRSRLEPQSSWNR 321
>SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 729
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 454 DIEEKRQRLEEAEKKRQAMLQAMKD 528
D+EEK + LEEA+ + +A+ MKD
Sbjct: 522 DLEEKAKELEEAKSENEAISGKMKD 546
>SB_47823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +1
Query: 460 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLE 630
EEKR EEA K+++++ + + + K T +K+ E ++ N+ ++ E
Sbjct: 459 EEKRTESEEAPKRKKSLKRRLSFSRKNKAKKTEEKQDEEGEAREGTMDDNEVSQKPE 515
>SB_2413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 493
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +1
Query: 190 PAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRA 309
PA ++EGEG+P+ +R+ Q + ++Q K + +K ++
Sbjct: 56 PANEEEGEGEPKPKRRKAQPSAPKEKQTKSRKRDKKKDKS 95
>SB_7463| Best HMM Match : Ank (HMM E-Value=0)
Length = 864
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 111 LLSVARVEVVTQSLGTGSWTGSTATLECGVRGDLQPG 1
L +AR +T S+ G+W + LECG + D G
Sbjct: 480 LYLIARHSFITLSIFGGTWYVTVLLLECGAKVDAADG 516
>SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 999
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = +1
Query: 457 IEEKRQRLE----EAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQ 624
++EK++RL+ E E+K KDA K ++ +K E A+++ K ++Q
Sbjct: 811 LKEKQERLKAKKKEEEEKELEKRSKTKDAKKYFESWKSKKDEELKEAHRAKMQELKKQKQ 870
Query: 625 LEEE 636
EEE
Sbjct: 871 KEEE 874
>SB_22747| Best HMM Match : 7tm_1 (HMM E-Value=3.1e-06)
Length = 337
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 391 RGAFLLRHEKPCAWPASL*GV 329
RGA L R+E PC W A L G+
Sbjct: 69 RGAALQRNEPPCMWIAILNGI 89
>SB_53672| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 544 PNFTIQKKSENFGLSNAQLERNKTKEQLEEE 636
P T + EN GLSN L ++KTK E+
Sbjct: 498 PTPTSSQTQENIGLSNGTLTQDKTKPGCSED 528
>SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42)
Length = 1078
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 460 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNA-QLERNKTKEQLEE 633
EE+RQ+ EEA K+R+ L + T + ++K G S A + +K E +E
Sbjct: 537 EERRQKREEARKRREEKLAKKGPTTSTSSSRKRRRKFNRNGRSAAIKAAASKLSENEDE 595
>SB_27122| Best HMM Match : I-set (HMM E-Value=1.9e-39)
Length = 378
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 90 EVVTQSLGTGSWTGSTATLECGVRGDLQP 4
E+V+ + T SW + +L+C VRG P
Sbjct: 290 EMVSSTTNTSSWDRNVLSLQCKVRGVPSP 318
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 460 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 636
++KR+R E+ K+RQ L+ K+ + I+K+ Q ER + KE+ E++
Sbjct: 914 KDKREREEKERKRRQQQLE--KEKKEKEKKLLIEKEKRE---KEKQKERLREKEEKEKQ 967
>SB_36542| Best HMM Match : Pox_A_type_inc (HMM E-Value=7.3e-11)
Length = 1500
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +1
Query: 463 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 636
E + ++E E + Q +K T N ++ K+EN + A L K KEQ E
Sbjct: 381 ESKMKIENLEHELQTKDALLKQTQVTVRN--LRAKTENLPIIEAYLAAQKAKEQAMRE 436
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.129 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,647,409
Number of Sequences: 59808
Number of extensions: 205350
Number of successful extensions: 902
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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