Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0088
(732 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.) 159 3e-39
SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40) 158 4e-39
SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37) 130 2e-30
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 118 4e-27
SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 1e-25
SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40) 109 2e-24
SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0) 102 3e-22
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 8e-18
SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 6e-17
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 1e-16
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 84 1e-16
SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37) 83 2e-16
SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 80 2e-15
SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 80 2e-15
SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33) 77 1e-14
SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 4e-12
SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30) 67 2e-11
SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-11
SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 63 2e-10
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 3e-10
SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29) 61 1e-09
SB_2302| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 7e-08
SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24) 55 7e-08
SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13) 54 9e-08
SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35) 54 1e-07
SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26) 53 3e-07
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_8534| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_17567| Best HMM Match : DnaJ (HMM E-Value=0.0007) 48 1e-05
SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_47290| Best HMM Match : Ank (HMM E-Value=5.4e-29) 44 1e-04
SB_3343| Best HMM Match : DnaJ (HMM E-Value=0.067) 44 2e-04
SB_16586| Best HMM Match : DnaJ (HMM E-Value=4.9e-10) 41 0.001
SB_29448| Best HMM Match : DnaJ (HMM E-Value=0.00022) 39 0.005
SB_13154| Best HMM Match : DnaJ (HMM E-Value=7.9e-11) 38 0.008
SB_407| Best HMM Match : DnaJ (HMM E-Value=0.0039) 36 0.026
SB_24982| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.045
SB_51721| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_3725| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_28143| Best HMM Match : Neur_chan_memb (HMM E-Value=2.2) 29 3.9
SB_602| Best HMM Match : TSP_1 (HMM E-Value=1e-27) 29 5.1
SB_42341| Best HMM Match : DUF701 (HMM E-Value=3) 29 5.1
SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_13431| Best HMM Match : Seryl_tRNA_N (HMM E-Value=2.3) 28 6.8
SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_34553| Best HMM Match : F5_F8_type_C (HMM E-Value=8.3e-22) 28 9.0
SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) 28 9.0
>SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 159 bits (385), Expect = 3e-39
Identities = 92/208 (44%), Positives = 122/208 (58%), Gaps = 7/208 (3%)
Frame = +3
Query: 126 MGKDYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDKKK 305
MGK+YY ILG+ K ASD ++KKAY+K A KYHPDKNK GAEE+FKE+AEAYEVLSD +K
Sbjct: 1 MGKNYYDILGVKKDASDQELKKAYKKQAFKYHPDKNKDPGAEEKFKEIAEAYEVLSDPQK 60
Query: 306 REIYDAH-----XXXXXXXXXXXXXXXXXXQSFSY-TFHGDPKATFAQFFGSASPFQEFF 467
REI+D + + F+Y FHGDP+ATF++ FG PF++F
Sbjct: 61 REIFDQYGEEGLKGGVPPPGAGDADGFQMPEGFTYFQFHGDPRATFSRVFGDEDPFKDFM 120
Query: 468 DLNGGGTTTFFDRDMDVDMDPFSNISMGQARPGGPGGAFRSHSF-NFHGSPSRKEKTQDP 644
D T F +M PF S G RS S+ + G S+ ++ QDP
Sbjct: 121 D-------TAFRGNM-----PF-GFSQSNVTSGPSYSRQRSSSYEDIPGFFSQCQRMQDP 167
Query: 645 PIEHDLYVSLEDIARGCVKKMKISRRVI 728
P+E +L+VSLE + G KK+KI +RV+
Sbjct: 168 PVEKELFVSLEKLLTGTTKKLKIIKRVL 195
>SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40)
Length = 351
Score = 158 bits (384), Expect = 4e-39
Identities = 96/212 (45%), Positives = 122/212 (57%), Gaps = 12/212 (5%)
Frame = +3
Query: 126 MGKDYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDKKK 305
MGKDYY +L + K AS DDIKKAYRK ALKYHPDKNK+ GAEE+FKE++EAYEVLSD KK
Sbjct: 1 MGKDYYAVLNVDKAASADDIKKAYRKQALKYHPDKNKSPGAEEKFKEISEAYEVLSDPKK 60
Query: 306 REIYDAHXXXXXXXXXXXXXXXXXXQS----------FSYTFHGDPKATFAQFFGSASPF 455
+EIYD + S F+YT GD + TF++ FG PF
Sbjct: 61 KEIYDQYGEEGLKGTPPPQNGGGHGFSGANFGPGFTTFTYT-SGDARETFSRVFGDEDPF 119
Query: 456 QEFFDLNGGGTTTFFD--RDMDVDMDPFSNISMGQARPGGPGGAFRSHSFNFHGSPSRKE 629
+ + G G +FF+ SN +M +SF F G+P +K+
Sbjct: 120 ADL--IGGLGGFSFFNGMGSHQRKGRVHSNFNMMDDE--------NMNSFEF-GAPPKKQ 168
Query: 630 KTQDPPIEHDLYVSLEDIARGCVKKMKISRRV 725
K QDPP+E DL VSLE++ +G KKMKISR+V
Sbjct: 169 KVQDPPLERDLLVSLEELYKGTTKKMKISRKV 200
>SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37)
Length = 399
Score = 130 bits (313), Expect = 2e-30
Identities = 86/200 (43%), Positives = 105/200 (52%)
Frame = +3
Query: 126 MGKDYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDKKK 305
MG DYY ILG+T+ A+D DIKK YRKL+LKYHPDKN+ AE +F++ AEAY+VLSD KK
Sbjct: 1 MGLDYYDILGLTRSATDADIKKEYRKLSLKYHPDKNQEPSAEVKFRQAAEAYDVLSDPKK 60
Query: 306 REIYDAHXXXXXXXXXXXXXXXXXXQSFSYTFHGDPKATFAQFFGSASPFQEFFDLNGGG 485
R IY+ YTFHGD F +EFF N
Sbjct: 61 RAIYNQFGEEGLKSGVPEKDAWTQ----GYTFHGDANRVF----------REFFGGNNPF 106
Query: 486 TTTFFDRDMDVDMDPFSNISMGQARPGGPGGAFRSHSFNFHGSPSRKEKTQDPPIEHDLY 665
+ F D D+ G GG HG RK QDPPIE +LY
Sbjct: 107 SELFDSYDPDI----------------GFGG--------IHGRGRRK---QDPPIERELY 139
Query: 666 VSLEDIARGCVKKMKISRRV 725
++LE++ +GCVKKMKISRRV
Sbjct: 140 LTLEEVFKGCVKKMKISRRV 159
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 118 bits (285), Expect = 4e-27
Identities = 64/153 (41%), Positives = 87/153 (56%)
Frame = +3
Query: 126 MGKDYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDKKK 305
MG++YY ILG+ + ASDDDIKKAYR+ AL +HPDKNK +GAEE+FKE++EAY+VL+D ++
Sbjct: 1 MGRNYYAILGVPRNASDDDIKKAYRRQALIFHPDKNKNSGAEEKFKEISEAYKVLTDPRQ 60
Query: 306 REIYDAHXXXXXXXXXXXXXXXXXXQSFSYTFHGDPKATFAQFFGSASPFQEFFDLNGGG 485
R+I+D + F ++F DP FA+ F PF+EF D G
Sbjct: 61 RDIFDMYGEEGLKGTSDSPFGGPCG-GFGFSFSEDPMKIFAEVFRDEEPFKEFEDFFMDG 119
Query: 486 TTTFFDRDMDVDMDPFSNISMGQARPGGPGGAF 584
F + FS+ S GQ G G F
Sbjct: 120 LGCGFQKVFQT--GNFSSYSTGQKGFGFEGMDF 150
>SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 113 bits (273), Expect = 1e-25
Identities = 79/212 (37%), Positives = 112/212 (52%), Gaps = 10/212 (4%)
Frame = +3
Query: 126 MGKDYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDKKK 305
M +YY++LG+ + A+ DDI++AYR+LALKYHPDKN AG EE FKEV+EAYEVL D ++
Sbjct: 1 MESNYYEVLGVERNATTDDIRRAYRRLALKYHPDKN--AGTEENFKEVSEAYEVLCDPQQ 58
Query: 306 REIYDAHXXXXXXXXXXXXXXXXXXQSFSYTFH--GDPKATFA-------QFFGSASPFQ 458
RE +D SF Y + G + F+ + F + +
Sbjct: 59 RERFD----KKFAPDTFRYSYSKRATSFDYEVNCGGFRNSHFSCTTEEAKRMFSRSFCDE 114
Query: 459 EFFDLNGG-GTTTFFDRDMDVDMDPFSNISMGQARPGGPGGAFRSHSFNFHGSPSRKEKT 635
+F DL GG G F R+ S +R F+ +F +P +K K
Sbjct: 115 DFSDLIGGFGDFGLFSREK----------SRKSSRYDDFFNEFKD-EMDFE-TPFKKFKV 162
Query: 636 QDPPIEHDLYVSLEDIARGCVKKMKISRRVIQ 731
QDPPIE DL + LE++ RG K+MK+SR++ Q
Sbjct: 163 QDPPIERDLLIGLEELLRGSTKRMKLSRKIFQ 194
>SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40)
Length = 250
Score = 109 bits (263), Expect = 2e-24
Identities = 52/127 (40%), Positives = 75/127 (59%), Gaps = 2/127 (1%)
Frame = +3
Query: 126 MGKDYYKILGITKGASDDDIKKAYRKLALKYHPDKN--KAAGAEERFKEVAEAYEVLSDK 299
M +DYY++LG+ + AS++D+KKAYR+ AL++HPDKN AEE+FK+++EAYEVLSDK
Sbjct: 1 MSEDYYEVLGVPRSASEEDVKKAYRRQALRWHPDKNPTNREHAEEKFKKLSEAYEVLSDK 60
Query: 300 KKREIYDAHXXXXXXXXXXXXXXXXXXQSFSYTFHGDPKATFAQFFGSASPFQEFFDLNG 479
+KR+IYD + P F +FFG PF++FF +
Sbjct: 61 EKRDIYDKYGKEGLTSQGTPREETFGASGVHVHVFRSPDEIFREFFGGFDPFEDFFSNHF 120
Query: 480 GGTTTFF 500
GG T +
Sbjct: 121 GGMRTSY 127
>SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 576
Score = 102 bits (244), Expect = 3e-22
Identities = 45/65 (69%), Positives = 54/65 (83%)
Frame = +3
Query: 126 MGKDYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDKKK 305
M KDYY+ILG+ + ASD IKKA+RK+A+KYHPDKNK AEE+F+EVAEAYEVLSD+ K
Sbjct: 23 MAKDYYQILGVPRNASDKQIKKAFRKMAVKYHPDKNKGKDAEEKFREVAEAYEVLSDENK 82
Query: 306 REIYD 320
R YD
Sbjct: 83 RRQYD 87
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 87.8 bits (208), Expect = 8e-18
Identities = 40/64 (62%), Positives = 49/64 (76%)
Frame = +3
Query: 132 KDYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDKKKRE 311
KDYYKILG+ A+ +IKKAY +LA KYHPD NK A E+F+EV+EAYEVLSD KR+
Sbjct: 58 KDYYKILGVPPNANQKEIKKAYFELAKKYHPDTNKDKSASEKFQEVSEAYEVLSDDGKRK 117
Query: 312 IYDA 323
YD+
Sbjct: 118 AYDS 121
>SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 966
Score = 85.0 bits (201), Expect = 6e-17
Identities = 44/76 (57%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Frame = +3
Query: 99 SFSNTIQIKMGKD--YYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERFKEVA 272
SF TI M K+ YY IL + A+ +IKK+YRKLALKYHPDKN G +RFK+++
Sbjct: 51 SFCQTILPIMVKETAYYDILNVPPTATATEIKKSYRKLALKYHPDKNPDEG--DRFKQIS 108
Query: 273 EAYEVLSDKKKREIYD 320
+AYEVLSD+KKR+IYD
Sbjct: 109 QAYEVLSDEKKRKIYD 124
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 84.2 bits (199), Expect = 1e-16
Identities = 41/70 (58%), Positives = 53/70 (75%), Gaps = 6/70 (8%)
Frame = +3
Query: 132 KDYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAG------AEERFKEVAEAYEVLS 293
KDYYKIL I+K AS+D+IKKAY+K ALK+HPD++ A AE++FKEV EAY +LS
Sbjct: 158 KDYYKILNISKTASEDEIKKAYKKEALKHHPDRHSGASDEQKKIAEKQFKEVNEAYSILS 217
Query: 294 DKKKREIYDA 323
D KK+ YD+
Sbjct: 218 DPKKKRRYDS 227
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 84.2 bits (199), Expect = 1e-16
Identities = 41/70 (58%), Positives = 53/70 (75%), Gaps = 6/70 (8%)
Frame = +3
Query: 132 KDYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAG------AEERFKEVAEAYEVLS 293
KDYYKIL I+K AS+D+IKKAY+K ALK+HPD++ A AE++FKEV EAY +LS
Sbjct: 158 KDYYKILNISKTASEDEIKKAYKKEALKHHPDRHSGASDEQKKIAEKQFKEVNEAYSILS 217
Query: 294 DKKKREIYDA 323
D KK+ YD+
Sbjct: 218 DPKKKRRYDS 227
>SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37)
Length = 238
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/71 (53%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Frame = +3
Query: 111 TIQIKMGKDYYKILGITKGASDDDIKKAYRKLALKYHPDKNK-AAGAEERFKEVAEAYEV 287
+IQ G+D+Y ILG+ + AS + IK+AYRKLA+K HPDKNK A+E+F ++ AYEV
Sbjct: 17 SIQTLAGRDFYAILGVPRDASKNQIKRAYRKLAMKLHPDKNKDDPKAQEKFHDIGAAYEV 76
Query: 288 LSDKKKREIYD 320
L+D +R+IYD
Sbjct: 77 LADDDQRKIYD 87
>SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 386
Score = 80.2 bits (189), Expect = 2e-15
Identities = 36/62 (58%), Positives = 48/62 (77%)
Frame = +3
Query: 141 YKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDKKKREIYD 320
Y +LG+ + ASD+DIKKAYRKLA + HPDKN G E+FK++ AYE+LSD +KRE+YD
Sbjct: 7 YDLLGVPQNASDNDIKKAYRKLAKELHPDKNPDTG--EKFKDITFAYEILSDPEKRELYD 64
Query: 321 AH 326
+
Sbjct: 65 RY 66
>SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 79
Score = 80.2 bits (189), Expect = 2e-15
Identities = 36/62 (58%), Positives = 48/62 (77%)
Frame = +3
Query: 141 YKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDKKKREIYD 320
Y +LG+ + ASD+DIKKAYRKLA + HPDKN G E+FK++ AYE+LSD +KRE+YD
Sbjct: 7 YDLLGVPQNASDNDIKKAYRKLAKELHPDKNPDTG--EKFKDITFAYEILSDPEKRELYD 64
Query: 321 AH 326
+
Sbjct: 65 RY 66
>SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33)
Length = 138
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/56 (64%), Positives = 44/56 (78%), Gaps = 2/56 (3%)
Frame = +3
Query: 135 DYYKILGITKGASDDDIKKAYRKLALKYHPDKN--KAAGAEERFKEVAEAYEVLSD 296
DYY IL + + AS+ DIKK+YRKLALK+HPDKN AE +FKE++EAYEVLSD
Sbjct: 3 DYYDILEVPRSASEQDIKKSYRKLALKWHPDKNPQNKEEAERKFKEISEAYEVLSD 58
>SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 572
Score = 72.5 bits (170), Expect = 3e-13
Identities = 32/69 (46%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Frame = +3
Query: 126 MGKDYYKILGITKGASDDDIKKAYRKLALKYHPDKN--KAAGAEERFKEVAEAYEVLSDK 299
M + +Y++LG+ + D +KK YRKLALK+HPDKN A + F+E+ +AY+VLSD
Sbjct: 1 MRRCHYEVLGVERDVDDSALKKTYRKLALKWHPDKNLDNAEESTRVFREIQQAYDVLSDP 60
Query: 300 KKREIYDAH 326
++R YD H
Sbjct: 61 QERAFYDKH 69
>SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Frame = +3
Query: 132 KDYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAG---AEERFKEVAEAYEVLSDKK 302
+DYYKILG+ + + +I KAYRKLA+K+HPD K AE+ F ++A A EVL+D +
Sbjct: 207 RDYYKILGLKRNCNKREITKAYRKLAVKWHPDNYKGEDKKKAEKMFIDIAAAKEVLTDPE 266
Query: 303 KREIYDA 323
KR YDA
Sbjct: 267 KRAKYDA 273
>SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 67.3 bits (157), Expect = 1e-11
Identities = 30/66 (45%), Positives = 49/66 (74%), Gaps = 3/66 (4%)
Frame = +3
Query: 132 KDYYKILGITKGASDDDIKKAYRKLALKYHP---DKNKAAGAEERFKEVAEAYEVLSDKK 302
K+ Y +LG++K AS+ +IK+AYRK++L+ HP DK + A +F+ ++++Y +LSDK+
Sbjct: 14 KNLYDVLGVSKTASESEIKRAYRKISLQVHPDRADKGEKEKATRKFQALSKSYCILSDKE 73
Query: 303 KREIYD 320
KR IYD
Sbjct: 74 KRAIYD 79
>SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30)
Length = 238
Score = 66.9 bits (156), Expect = 2e-11
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Frame = +3
Query: 84 IIKD*SFSNTIQIKMG--KDYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAE-E 254
++KD +S K G K+YY +LG++ AS IK AY KL++K+HPD+++ + + E
Sbjct: 53 LLKDAVWSRCYANKPGSKKNYYNVLGVSPKASQSKIKDAYYKLSMKHHPDRHQGSDKKHE 112
Query: 255 RFKEVAEAYEVLSDKKKREIYD 320
F+E+AEAY VL + + R+ YD
Sbjct: 113 VFQEIAEAYSVLGNLESRKQYD 134
>SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 66.9 bits (156), Expect = 2e-11
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Frame = +3
Query: 84 IIKD*SFSNTIQIKMG--KDYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAE-E 254
++KD +S K G K+YY +LG++ AS IK AY KL++K+HPD+++ + + E
Sbjct: 53 LLKDAVWSRCYANKPGSKKNYYNVLGVSPKASQSKIKDAYYKLSMKHHPDRHQGSDKKHE 112
Query: 255 RFKEVAEAYEVLSDKKKREIYD 320
F+E+AEAY VL + + R+ YD
Sbjct: 113 VFQEIAEAYSVLGNLESRKQYD 134
>SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 875
Score = 64.1 bits (149), Expect = 1e-10
Identities = 27/61 (44%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Frame = +3
Query: 132 KDYYKILGITKGASDDDIKKAYRKLALKYHPDKNK--AAGAEERFKEVAEAYEVLSDKKK 305
K+ Y++LG+T+ A+ ++IKK Y+KLA+K+HPD+++ A++ F E+ EAYE+LS K
Sbjct: 793 KNSYRVLGLTEDATQEEIKKRYKKLAMKWHPDRHRDNKEEAQKHFMEIQEAYEILSKLKT 852
Query: 306 R 308
+
Sbjct: 853 K 853
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 63.3 bits (147), Expect = 2e-10
Identities = 25/62 (40%), Positives = 45/62 (72%)
Frame = +3
Query: 135 DYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDKKKREI 314
++Y++LG+ A+ +I++AYR+++L+ HPD+NK AE +F+++ EVL D+ KR+
Sbjct: 2483 NFYQVLGVETTATQAEIRRAYRRISLQLHPDRNKEDDAELKFRKLVAVAEVLKDEDKRKR 2542
Query: 315 YD 320
YD
Sbjct: 2543 YD 2544
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/52 (51%), Positives = 40/52 (76%)
Frame = +3
Query: 117 QIKMGKDYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERFKEVA 272
++K KD+Y+ LGI +GA+ DDI +AY+KLA+ HPDK+ A G+EE FK ++
Sbjct: 137 RLKNAKDHYERLGIQQGATKDDINRAYKKLAVLIHPDKSVAPGSEEAFKALS 188
>SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29)
Length = 291
Score = 60.9 bits (141), Expect = 1e-09
Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +3
Query: 129 GKDYYKILGITKGASDDDIKKAYRKLALKYHPDKN-KAAGAEERFKEVAEAYEVLSDKKK 305
G++YY LG+ K +++ +I KAYRK ALK HPDKN A E F ++++A EVL+D K
Sbjct: 5 GENYYDTLGVHKDSTEKEILKAYRKKALKCHPDKNPDNPKASELFHKLSKALEVLTDPKA 64
Query: 306 REIYD 320
R ++
Sbjct: 65 RAAFN 69
>SB_2302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = +3
Query: 132 KDYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDKKKRE 311
K++Y ++ + A+ +IK AY +L+ YHPD N +A A ERF E+ AY LS + R
Sbjct: 50 KNHYDVMKLLPTATQREIKSAYYELSRIYHPDLNSSAEARERFAELTLAYNTLSRLETRR 109
Query: 312 IYD 320
YD
Sbjct: 110 EYD 112
>SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24)
Length = 565
Score = 54.8 bits (126), Expect = 7e-08
Identities = 26/63 (41%), Positives = 38/63 (60%)
Frame = +3
Query: 132 KDYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDKKKRE 311
K++Y ++ + A+ +IK AY +L+ YHPD N +A A ERF E+ AY LS + R
Sbjct: 197 KNHYDVMKLLPTATQREIKSAYYELSRIYHPDLNSSAEARERFAELTLAYNTLSRLETRR 256
Query: 312 IYD 320
YD
Sbjct: 257 EYD 259
>SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13)
Length = 278
Score = 54.4 bits (125), Expect = 9e-08
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +3
Query: 387 FSYTFHGDPKATFAQFFGSASPFQEFFDLNGGGTTTFFDRDMDVDMDPFSNISMGQARPG 566
F ++F DP FA+ F PF+EF D G F + FS+ S GQ
Sbjct: 22 FGFSFSEDPMKIFAEVFRDEEPFKEFEDFFMDGLGCGFQKVFQTGN--FSSYSTGQK--- 76
Query: 567 GPGGAFRSHSFNFHGSPSRKE-KTQDPPIEHDLYVSLEDIARGCVKKMKISRRVI 728
G F F P +KE Q+P +E L VSLE++ G V+K++I+ +V+
Sbjct: 77 --GFGFEGMDFGPGPDPFKKEGPIQEPAVEKILPVSLEELYIGSVRKLRINHQVL 129
>SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1671
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = +3
Query: 135 DYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDKKK 305
D Y +L I +GAS +I++ YR L+ KYHPDK G +F +A+AYE +SD K
Sbjct: 1248 DPYAVLEIDRGASVAEIRRQYRSLSKKYHPDKE--TGDPRKFMRIAKAYEAVSDFNK 1302
>SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +3
Query: 132 KDYYKILGITKGASDDDIKKAYRKLALKYHPDKN-KAAGAEERFKEVAEAYEVLSDKKKR 308
K++Y+IL + K AS +IK A+ K ++HPD N + + F +V+EAY LS +R
Sbjct: 7 KNFYEILDVPKDASQTEIKSAFIKKTKEFHPDVNPDDPDSHKAFIKVSEAYTTLSSSARR 66
Query: 309 EIYDA 323
+ YDA
Sbjct: 67 QQYDA 71
>SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26)
Length = 211
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +3
Query: 132 KDYYKILGITKGASDDDIKKAYRKLALKYHPDKN-KAAGAEERFKEVAEAYEVLSDKKKR 308
K++Y+IL + K AS +IK A+ K ++HPD N + + F +V+EAY LS +R
Sbjct: 68 KNFYEILDVPKDASQTEIKSAFIKKTKEFHPDVNPDDPDSHKAFIKVSEAYTTLSSSARR 127
Query: 309 EIYDA 323
+ YDA
Sbjct: 128 QQYDA 132
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 51.2 bits (117), Expect = 8e-07
Identities = 19/35 (54%), Positives = 30/35 (85%)
Frame = +3
Query: 132 KDYYKILGITKGASDDDIKKAYRKLALKYHPDKNK 236
+DYY++ GI++ A+ +I+KA++KLAL+ HPDKNK
Sbjct: 27 EDYYELFGISRDATSKEIRKAFKKLALRLHPDKNK 61
>SB_8534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 926
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 132 KDYYKILGITKGASDD-DIKKAYRKLALKYHPDKNKAAGAEERFKEVAEAYEVL 290
++ Y +LG+ KG + D ++AY KLA +YHPD K+ ERF + AY V+
Sbjct: 388 RECYMLLGLEKGKTGSVDAREAYLKLAKQYHPDSGKSTADGERFAMIEHAYRVV 441
>SB_17567| Best HMM Match : DnaJ (HMM E-Value=0.0007)
Length = 831
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = +3
Query: 135 DYYKILGITKGASDDDIKKAYRKLALKYHPDK 230
D Y ILG+ ASDDDIK+ YRKLA+ HPDK
Sbjct: 800 DPYSILGVPPEASDDDIKRQYRKLAVLIHPDK 831
>SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 47.2 bits (107), Expect = 1e-05
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +3
Query: 135 DYYKILGITKGASDDDIKKAYRKLALKYHPDKN 233
DYY +L + K A++D++K AYR+L + YHPDK+
Sbjct: 131 DYYAVLAVRKEANEDELKAAYRRLCVLYHPDKH 163
>SB_47290| Best HMM Match : Ank (HMM E-Value=5.4e-29)
Length = 445
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +3
Query: 132 KDYYKILGITKGASDDDIKKAYRKLALKYHPDKNK-AAGAEERFKEVAEAYEVLSDKKKR 308
+D+Y +L + A+++ I ++K A ++HPDK + + E F + +A +VL D+K R
Sbjct: 287 EDFYSLLDCGEYATNEQINTEFKKKAKEWHPDKKRNDTDSHEYFARLKKARDVLCDEKMR 346
Query: 309 EIYD 320
YD
Sbjct: 347 AKYD 350
>SB_3343| Best HMM Match : DnaJ (HMM E-Value=0.067)
Length = 29
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +3
Query: 147 ILGITKGASDDDIKKAYRKLALKYHPDK 230
ILG+ ASDDDIK+ YRKLA+ HPDK
Sbjct: 2 ILGVPPEASDDDIKRQYRKLAVLIHPDK 29
>SB_16586| Best HMM Match : DnaJ (HMM E-Value=4.9e-10)
Length = 141
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 8/65 (12%)
Frame = +3
Query: 132 KDYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAG--------AEERFKEVAEAYEV 287
+D +LG+ IK+AYRKL ++HPDK A G A+++ +E+ +AYE+
Sbjct: 74 EDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYEL 133
Query: 288 LSDKK 302
+ +K
Sbjct: 134 IKQQK 138
>SB_29448| Best HMM Match : DnaJ (HMM E-Value=0.00022)
Length = 118
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +3
Query: 132 KDYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERF 260
K +Y ++ + A+ +IK AY +L+ YHPD N +A A ERF
Sbjct: 74 KYHYDVMKLLPTATLREIKSAYYELSRIYHPDLNSSAEARERF 116
>SB_13154| Best HMM Match : DnaJ (HMM E-Value=7.9e-11)
Length = 340
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/65 (33%), Positives = 32/65 (49%)
Frame = +3
Query: 126 MGKDYYKILGITKGASDDDIKKAYRKLALKYHPDKNKAAGAEERFKEVAEAYEVLSDKKK 305
+G D ++K +KKA RK L +HPDKN G E+ + + AY L D +
Sbjct: 136 LGLDMKTARKLSKDELKKTLKKACRKQLLIWHPDKN--GGDAEQARNIIMAYSCLEDDET 193
Query: 306 REIYD 320
R Y+
Sbjct: 194 RARYN 198
>SB_407| Best HMM Match : DnaJ (HMM E-Value=0.0039)
Length = 106
Score = 36.3 bits (80), Expect = 0.026
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 108 NTIQIKMGKDYYKILGITKGASDDD-IKKAYRKLALKYHPDKN 233
+T+ I + K+ GA D+ I+KAY +LA KYHPDKN
Sbjct: 60 STMSIDEAYETLKLKQDISGALDESKIRKAYFRLAQKYHPDKN 102
>SB_24982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 35.5 bits (78), Expect = 0.045
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +3
Query: 177 DDIKKAYRKLALKYHPDK----NKAAGAEERFKEVAEAYEVLSDKKKREIY 317
DD+KKAYRK L HPDK A A F E+ EA+ + + + +Y
Sbjct: 483 DDVKKAYRKAVLCVHPDKLTGEPHEALARAIFMELNEAWSLFEESGCKPLY 533
>SB_51721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = -3
Query: 568 PPGRACPMLMLLKGSISTSMSRSKNVVVPPPFRSKNSWNGLAEPKNCANVAFGSP 404
PP + C + + S +++ + PP R K G P C NV+ P
Sbjct: 87 PPNKKCDRFVWAEPSKEAKKAKAVPLWTPPSKRKKGKGKGKKLPSTCVNVSVPVP 141
>SB_3725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 408 DPKATFAQFFGSASPFQEFFDLNGGG 485
DP+ +++F G AS +QE DL G G
Sbjct: 167 DPEEYYSRFVGGASVYQEIRDLGGTG 192
>SB_28143| Best HMM Match : Neur_chan_memb (HMM E-Value=2.2)
Length = 356
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 573 GGAFRSHSFNFHGSPSRKEKTQDPPIEHDLYVSLEDIARGCVKKMKISRRV 725
G + R HS+N GSPSR + ++ Y + +D +R +K+K+ R +
Sbjct: 295 GRSPRRHSYN--GSPSRDVLSHSYNMQLTSYCAEKDQSRAKTRKLKVDRSI 343
>SB_602| Best HMM Match : TSP_1 (HMM E-Value=1e-27)
Length = 590
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 346 VVWAGRMVLVAVNHFPTRSTATRKQRSRSSLVR 444
V WA V +VNH P R T+K + LV+
Sbjct: 107 VGWASNHVFASVNHLPARVKTTKKHGAIRHLVQ 139
>SB_42341| Best HMM Match : DUF701 (HMM E-Value=3)
Length = 651
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 542 YVTERIHIHIHVAVEERCSSTSIQIEEFLERAGRTKELRERC 417
+V + + +H+ EERC+ S FL AG T RC
Sbjct: 463 FVNHEVLVKVHLLFEERCAVLSFVTRTFL-MAGYTNFSESRC 503
>SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 580 APPGPP-GRACPMLMLLKGSISTSMSRSKNVVVPPP 476
APP PP GR + +L + T+ S + NV PPP
Sbjct: 724 APPPPPLGRDSAAVFMLTWTPLTNTSSAANVPPPPP 759
>SB_13431| Best HMM Match : Seryl_tRNA_N (HMM E-Value=2.3)
Length = 743
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 513 DVDMDPFSNISMGQARPGGPGGAFRSHSFNFHGSPSRKEKT 635
D +MD + GQ P G++ FNF GS S K+
Sbjct: 349 DPNMDEIIGLCSGQFSDSLPQGSWSKKGFNFSGSQSSYSKS 389
>SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4247
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 550 PMLMLLKGSISTSMSRSKNVVVPPPFRSKNSWN 452
P++ + GS+STS ++S V P F+S +S N
Sbjct: 1466 PIIPAVPGSLSTSTAQSAAAVHPLDFKSSSSQN 1498
>SB_34553| Best HMM Match : F5_F8_type_C (HMM E-Value=8.3e-22)
Length = 667
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = +2
Query: 347 WYGRAEWSWWRSIIF--LHVPRRPESN 421
WY A W WW S ++ H P R N
Sbjct: 579 WYSYATWFWWSSRVYPVCHNPSRTVLN 605
>SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5)
Length = 436
Score = 27.9 bits (59), Expect = 9.0
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 13/76 (17%)
Frame = +1
Query: 247 QRKGLKKWQKLMRFYRTRR----------KEKFMMRTAKKA*RVVWAG---RMVLVAVNH 387
Q++ +KK Q L R R +R +EK R+ K RV+ + RM ++++
Sbjct: 111 QQQQIKKTQLLARQERNKRYSKFVHDVLAEEKLKSRSLKSHTRVISSHQPIRMPRLSISE 170
Query: 388 FPTRSTATRKQRSRSS 435
PTRS TR SR+S
Sbjct: 171 TPTRSRETRASVSRTS 186
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,671,619
Number of Sequences: 59808
Number of extensions: 544090
Number of successful extensions: 1723
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1699
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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