Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0082
(575 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC048971-1|AAH48971.1| 134|Homo sapiens SCD5 protein protein. 49 1e-05
AL831891-1|CAD38567.1| 160|Homo sapiens hypothetical protein pr... 49 1e-05
AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase pro... 49 1e-05
BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase... 46 7e-05
AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase... 46 7e-05
AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase... 46 7e-05
AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase... 46 7e-05
AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase... 46 7e-05
AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase... 46 7e-05
Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase p... 44 4e-04
BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein. 42 0.002
D79991-1|BAA11486.1| 1745|Homo sapiens KIAA0169 protein protein. 30 5.1
BX537774-1|CAD97835.1| 1639|Homo sapiens hypothetical protein pr... 30 5.1
BC111045-1|AAI11046.1| 974|Homo sapiens NUP188 protein protein. 30 5.1
BC040352-1|AAH40352.1| 1293|Homo sapiens NUP188 protein protein. 30 5.1
AL672142-10|CAI10845.1| 1749|Homo sapiens nucleoporin 188kDa pro... 30 5.1
AL592211-4|CAI12368.1| 1749|Homo sapiens nucleoporin 188kDa prot... 30 5.1
>BC048971-1|AAH48971.1| 134|Homo sapiens SCD5 protein protein.
Length = 134
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/50 (50%), Positives = 30/50 (60%)
Frame = +2
Query: 8 DYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGT 157
DY A E G + N TT FIDF W+G A D K A+ +IE R RTGD +
Sbjct: 85 DYSASEFGLNF-NPTTWFIDFMCWLGLATDRKRATKPMIEARKARTGDSS 133
>AL831891-1|CAD38567.1| 160|Homo sapiens hypothetical protein
protein.
Length = 160
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/50 (50%), Positives = 30/50 (60%)
Frame = +2
Query: 8 DYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGT 157
DY A E G + N TT FIDF W+G A D K A+ +IE R RTGD +
Sbjct: 111 DYSASEFGLNF-NPTTWFIDFMCWLGLATDRKRATKPMIEARKARTGDSS 159
>AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase
protein.
Length = 330
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/50 (50%), Positives = 30/50 (60%)
Frame = +2
Query: 8 DYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGT 157
DY A E G + N TT FIDF W+G A D K A+ +IE R RTGD +
Sbjct: 281 DYSASEFGLNF-NPTTWFIDFMCWLGLATDRKRATKPMIEARKARTGDSS 329
>BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 46.4 bits (105), Expect = 7e-05
Identities = 27/52 (51%), Positives = 29/52 (55%)
Frame = +2
Query: 8 DYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGTYK 163
DY A E +IN TT FID A +G AYD K S I R RTGDG YK
Sbjct: 307 DYSASEYR-WHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGNYK 357
>AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 46.4 bits (105), Expect = 7e-05
Identities = 27/52 (51%), Positives = 29/52 (55%)
Frame = +2
Query: 8 DYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGTYK 163
DY A E +IN TT FID A +G AYD K S I R RTGDG YK
Sbjct: 307 DYSASEYR-WHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGNYK 357
>AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 359
Score = 46.4 bits (105), Expect = 7e-05
Identities = 27/52 (51%), Positives = 29/52 (55%)
Frame = +2
Query: 8 DYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGTYK 163
DY A E +IN TT FID A +G AYD K S I R RTGDG YK
Sbjct: 307 DYSASEYR-WHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGNYK 357
>AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 46.4 bits (105), Expect = 7e-05
Identities = 27/52 (51%), Positives = 29/52 (55%)
Frame = +2
Query: 8 DYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGTYK 163
DY A E +IN TT FID A +G AYD K S I R RTGDG YK
Sbjct: 307 DYSASEYR-WHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGNYK 357
>AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 366
Score = 46.4 bits (105), Expect = 7e-05
Identities = 27/52 (51%), Positives = 29/52 (55%)
Frame = +2
Query: 8 DYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGTYK 163
DY A E +IN TT FID A +G AYD K S I R RTGDG YK
Sbjct: 314 DYSASEYR-WHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGNYK 364
>AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 46.4 bits (105), Expect = 7e-05
Identities = 27/52 (51%), Positives = 29/52 (55%)
Frame = +2
Query: 8 DYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGTYK 163
DY A E +IN TT FID A +G AYD K S I R RTGDG YK
Sbjct: 307 DYSASEYR-WHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDGNYK 357
>Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase
protein.
Length = 359
Score = 44.0 bits (99), Expect = 4e-04
Identities = 25/52 (48%), Positives = 28/52 (53%)
Frame = +2
Query: 8 DYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDGTYK 163
DY A E +IN T FID+ A +G YD K S I R RTGDG YK
Sbjct: 307 DYSASEYR-WHINFNTFFIDWMAALGLTYDRKKVSKAAILARIKRTGDGNYK 357
>BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein.
Length = 355
Score = 41.5 bits (93), Expect = 0.002
Identities = 25/49 (51%), Positives = 27/49 (55%)
Frame = +2
Query: 8 DYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTGDG 154
DY A E +IN TT FID A +G AYD K S I R RTGDG
Sbjct: 307 DYSASEYR-WHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDG 354
>D79991-1|BAA11486.1| 1745|Homo sapiens KIAA0169 protein protein.
Length = 1745
Score = 30.3 bits (65), Expect = 5.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 157 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 294
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 1543 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1588
>BX537774-1|CAD97835.1| 1639|Homo sapiens hypothetical protein
protein.
Length = 1639
Score = 30.3 bits (65), Expect = 5.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 157 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 294
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 1437 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1482
>BC111045-1|AAI11046.1| 974|Homo sapiens NUP188 protein protein.
Length = 974
Score = 30.3 bits (65), Expect = 5.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 157 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 294
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 772 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 817
>BC040352-1|AAH40352.1| 1293|Homo sapiens NUP188 protein protein.
Length = 1293
Score = 30.3 bits (65), Expect = 5.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 157 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 294
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 1091 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1136
>AL672142-10|CAI10845.1| 1749|Homo sapiens nucleoporin 188kDa protein.
Length = 1749
Score = 30.3 bits (65), Expect = 5.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 157 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 294
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 1547 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1592
>AL592211-4|CAI12368.1| 1749|Homo sapiens nucleoporin 188kDa protein.
Length = 1749
Score = 30.3 bits (65), Expect = 5.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 157 LQTTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLL 294
L T ++ LK SK+ A HF D C+++ Q+ ++ YN + L
Sbjct: 1547 LHTVQYGLLKILSKTLAALRHFTPDVCQILLDQSLDLAEYNFLFAL 1592
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,729,331
Number of Sequences: 237096
Number of extensions: 1447551
Number of successful extensions: 2110
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2110
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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