Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0082
         (575 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical pr...    37   0.012
AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA...    37   0.012
Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical pr...    33   0.11 
AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA ...    33   0.11 
Z68333-4|CAA92723.2|  271|Caenorhabditis elegans Hypothetical pr...    31   0.78 
U28971-3|AAK68670.1|  319|Caenorhabditis elegans Hypothetical pr...    29   1.8  
Z75547-6|CAA99903.1|  377|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AC199169-9|ABO33255.1|  435|Caenorhabditis elegans Hypothetical ...    28   5.5  
U28971-5|AAA68379.1|  982|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z99171-3|CAB16310.1|  374|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z82286-6|CAB05304.1|  376|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z70204-3|CAA94113.1|  385|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AL110479-18|CAB54365.1|  484|Caenorhabditis elegans Hypothetical...    27   9.5  
AF240777-1|AAF63745.1|  376|Caenorhabditis elegans delta 12 fatt...    27   9.5  

>Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical
           protein W06D12.3 protein.
          Length = 333

 Score = 36.7 bits (81), Expect = 0.012
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +2

Query: 5   QDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTG 148
           QDYR  E  + ++N T   IDF A +G  YD KT    +I+++  + G
Sbjct: 274 QDYRTSEHAE-FLNWTRVLIDFGASIGMVYDRKTTPEEVIQRQCKKFG 320


>AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA
           fatty acid desaturaseFAT-5 protein.
          Length = 333

 Score = 36.7 bits (81), Expect = 0.012
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +2

Query: 5   QDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTG 148
           QDYR  E  + ++N T   IDF A +G  YD KT    +I+++  + G
Sbjct: 274 QDYRTSEHAE-FLNWTRVLIDFGASIGMVYDRKTTPEEVIQRQCKKFG 320


>Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical
           protein VZK822L.1 protein.
          Length = 339

 Score = 33.5 bits (73), Expect = 0.11
 Identities = 20/48 (41%), Positives = 24/48 (50%)
 Frame = +2

Query: 5   QDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTG 148
           QDYR  E   +Y N T   ID  A +G  YD KTA   II ++    G
Sbjct: 283 QDYRTSEYSLKY-NWTRVLIDTAAALGLVYDRKTACDEIIGRQVSNHG 329


>AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-6 protein.
          Length = 339

 Score = 33.5 bits (73), Expect = 0.11
 Identities = 20/48 (41%), Positives = 24/48 (50%)
 Frame = +2

Query: 5   QDYRADELGDRYINLTTRFIDFFAWMGWAYDLKTASTNIIEKRALRTG 148
           QDYR  E   +Y N T   ID  A +G  YD KTA   II ++    G
Sbjct: 283 QDYRTSEYSLKY-NWTRVLIDTAAALGLVYDRKTACDEIIGRQVSNHG 329


>Z68333-4|CAA92723.2|  271|Caenorhabditis elegans Hypothetical
           protein C05C12.4 protein.
          Length = 271

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +1

Query: 163 TTKWNELKQSSKSFFA*YHFFDDFCKVIQKQASGISYYNNSYLLK*LFLI 312
           TT W  +KQS K F   Y+  D F KV+  ++  I +     ++  LF I
Sbjct: 123 TTYWKTIKQSQKFFEVVYNKSDSFFKVVGSKSCKIFWEYRRLVILVLFAI 172


>U28971-3|AAK68670.1|  319|Caenorhabditis elegans Hypothetical
           protein B0244.7 protein.
          Length = 319

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +1

Query: 274 YNNSYLLK*LFLIFAGNFCIGFYCINLNLYIFLLVLSQILKL 399
           YN   LL+  + IF    C+ F+ + LN+YIF +++  + K+
Sbjct: 40  YNIEMLLR--WAIFIIPCCMSFFALFLNIYIFYVLIPNLRKM 79


>Z75547-6|CAA99903.1|  377|Caenorhabditis elegans Hypothetical
           protein R11D1.5 protein.
          Length = 377

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +1

Query: 223 FDDFCKVIQKQASGISYYNNSYLLK*LFLIFAGNFCIGFYCINLNLYIFLL-VLSQILKL 399
           F  FCK +Q+  + IS   N+YL+  L +I+     IG Y   L +YI +  +L  IL L
Sbjct: 6   FSLFCKSLQETCTFISLILNAYLI--LLIIYKSPKKIGNYKY-LMIYICVFEILYTILGL 62

Query: 400 I 402
           I
Sbjct: 63  I 63


>AC199169-9|ABO33255.1|  435|Caenorhabditis elegans Hypothetical
           protein F38A1.4 protein.
          Length = 435

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 154 DLQTTKWNELKQSSKSFF 207
           D+  TKWN  ++S K+FF
Sbjct: 139 DIVNTKWNSFRESDKNFF 156


>U28971-5|AAA68379.1|  982|Caenorhabditis elegans Hypothetical
           protein B0244.6 protein.
          Length = 982

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +1

Query: 313 FAGNFCI-GFYCINLNLYIFLLVLSQILKLIIGYKRNITLSP*ACEVSKLRN 465
           F GNF I    C+   + I   V   +++     KR+ TLS  A  V ++RN
Sbjct: 426 FIGNFIIIASVCLVFTIAILFFVFISLVRSSRKLKRSNTLSSSASSVKRVRN 477


>Z99171-3|CAB16310.1|  374|Caenorhabditis elegans Hypothetical
           protein F47G4.3 protein.
          Length = 374

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 8   DYRADELGDRYINLTTRFIDFFAWMGWAYDLKTA 109
           DY A EL     N+      F   +GWAY++K+A
Sbjct: 219 DYEAVELCGALKNIVACAAGFADGLGWAYNVKSA 252


>Z82286-6|CAB05304.1|  376|Caenorhabditis elegans Hypothetical
           protein W02A2.1 protein.
          Length = 376

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +2

Query: 497 FIEYEFLNAI*AFLSYIKIISPYW 568
           F +YE+LN +   L++  I++P+W
Sbjct: 100 FSDYEWLNDLCGHLAHAPILAPFW 123


>Z70204-3|CAA94113.1|  385|Caenorhabditis elegans Hypothetical
           protein C11G6.3 protein.
          Length = 385

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -1

Query: 533 TPILRLKIRIQ*NIQTP 483
           TP+L+LKI+   N+QTP
Sbjct: 14  TPVLKLKIKFNPNLQTP 30


>AL110479-18|CAB54365.1|  484|Caenorhabditis elegans Hypothetical
           protein Y105C5B.19 protein.
          Length = 484

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +2

Query: 56  RFIDFFAWMGWAYDLKTASTNIIEKRAL 139
           R +D++ W+ +A   +T + N++E+ AL
Sbjct: 232 RDVDYYEWLNFAKRCRTQNQNLMEEMAL 259


>AF240777-1|AAF63745.1|  376|Caenorhabditis elegans delta 12 fatty
           acid desaturaseFAT-2 protein.
          Length = 376

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +2

Query: 497 FIEYEFLNAI*AFLSYIKIISPYW 568
           F +YE+LN +   L++  I++P+W
Sbjct: 100 FSDYEWLNDLCGHLAHAPILAPFW 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,912,216
Number of Sequences: 27780
Number of extensions: 234318
Number of successful extensions: 545
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)