Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0075
         (473 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   1.7  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   3.8  
AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    21   8.9  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 426 NFITKCQIYHTEHLCVYRL*SSLDVGPSSP 337
           N  TKC     + LC Y L   + V P +P
Sbjct: 441 NSKTKCCFAQDDGLCPYTLKHKIRVPPGTP 470


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 104 GKKYRQISLLTYNYFIF 154
           GK +   S +  NYFIF
Sbjct: 8   GKNFPSTSFILINYFIF 24


>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 36

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 124 NLPIFFSTFQSKSPTPLLSI 65
           N+P   ST  S  P P L+I
Sbjct: 17  NMPTMDSTVSSAKPEPELNI 36


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,319
Number of Sequences: 438
Number of extensions: 2450
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)