Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0074
(637 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 73 3e-13
SB_43191| Best HMM Match : Inositol_P (HMM E-Value=1.1e-18) 66 3e-11
SB_47001| Best HMM Match : Asparaginase_2 (HMM E-Value=2.5e-40) 63 2e-10
SB_39361| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_42811| Best HMM Match : SRCR (HMM E-Value=0) 30 1.8
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 30 1.8
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 2.4
SB_53618| Best HMM Match : DHquinase_I (HMM E-Value=6.1) 29 2.4
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 28 5.5
SB_7991| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05) 28 5.5
SB_56469| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-12) 28 7.3
SB_49525| Best HMM Match : 2-Hacid_dh_C (HMM E-Value=5.2e-10) 28 7.3
SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05) 28 7.3
SB_36596| Best HMM Match : PSP (HMM E-Value=3.3e-18) 28 7.3
SB_3490| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_42380| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +1
Query: 394 IVVWVDPLDGTSEYTQGFLEHVTVLIGIAVNETPVAGVIHQPYYKNIVEGD-KKIGRTIW 570
+VVWVDP+DGT E+T+ G++ PVAGVIHQP++ + D K+GRT+W
Sbjct: 3 VVVWVDPVDGTKEFTE----------GVSYEGRPVAGVIHQPFFGHNSSSDLSKLGRTLW 52
Query: 571 GLHGVGVGGFTPAPPPE 621
G++G+G GF P P+
Sbjct: 53 GINGLGAFGFKTKPIPD 69
>SB_43191| Best HMM Match : Inositol_P (HMM E-Value=1.1e-18)
Length = 240
Score = 65.7 bits (153), Expect = 3e-11
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Frame = +1
Query: 250 YPNLKIIGEEDSLEDEGEVVSDWLVNEIDKEILKLQCPPNLQEVKEE-----DIVVWVDP 414
+P++K++ EE E D ++ + L LQ +++E +++VW+DP
Sbjct: 9 FPSVKVVSEEHEASAAPE---DTTSPKLSSATILLN--NELQNIEDEYVPVSNVLVWIDP 63
Query: 415 LDGTSEYTQGFLEHVTVLIGIAVNETPVAGVIHQPYYK 528
LD T EYT+ L VT ++ I VN PVAGVIH+P+ K
Sbjct: 64 LDATKEYTENLLHFVTTMVCIVVNGKPVAGVIHKPFQK 101
>SB_47001| Best HMM Match : Asparaginase_2 (HMM E-Value=2.5e-40)
Length = 423
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/63 (52%), Positives = 46/63 (73%), Gaps = 2/63 (3%)
Frame = +1
Query: 1 VAAL*TSGSPGCRNRHEVI--MYGSVPLIVRLLASSVSVANRAGKIVRDVMSKGELGIVE 174
+AA+ T+GS R + M SVP IVRL++SSVS+ANRAG ++RD++ KGELGI++
Sbjct: 325 IAAISTTGSGEFILRCTLASKMTSSVPFIVRLVSSSVSIANRAGSVIRDILKKGELGIID 384
Query: 175 KGK 183
K K
Sbjct: 385 KVK 387
>SB_39361| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 14/75 (18%)
Frame = +1
Query: 391 DIVVWVDPLDGTSEY--------TQGFLEH----VTVLIGI--AVNETPVAGVIHQPYYK 528
+I +W+DP+DGT++Y T G L V VLIG+ + P+AGVI+QP+ K
Sbjct: 149 NIGIWIDPIDGTAQYMSGSHGVFTNGLLAQGLPCVCVLIGVYDEITGQPIAGVINQPFIK 208
Query: 529 NIVEGDKKIGRTIWG 573
G WG
Sbjct: 209 YNETTQTWTGGKTWG 223
>SB_42811| Best HMM Match : SRCR (HMM E-Value=0)
Length = 854
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/89 (25%), Positives = 40/89 (44%)
Frame = +1
Query: 292 DEGEVVSDWLVNEIDKEILKLQCPPNLQEVKEEDIVVWVDPLDGTSEYTQGFLEHVTVLI 471
D E ++ + + ++K + PP+ E K +D+V+ DP T GFL V ++
Sbjct: 675 DIAETLNKYCKDCLEKRARR-DSPPS--EFKADDVVIVEDPATSTKNSPPGFLLVVFAVV 731
Query: 472 GIAVNETPVAGVIHQPYYKNIVEGDKKIG 558
N+ + V K+I E + IG
Sbjct: 732 K-TTNDGKIVVVKKDSIEKSIAEDNSAIG 759
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +1
Query: 271 GEEDSLEDEGEVVSDWLVNEIDKEILKLQCPPNLQEVKEEDIVVWVDPLDGTS 429
GEE+ +E GE++ L EI ++ + PP E+ E ++V+ +P T+
Sbjct: 160 GEEEEIEP-GELMRVLLAKEIHFTVVHVSPPPPEVELHVEQVIVFCEPAQLTT 211
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/86 (24%), Positives = 35/86 (40%)
Frame = +1
Query: 88 LLASSVSVANRAGKIVRDVMSKGELGIVEKGKDDYQTEADRSAQRCIVASLAAQYPNLKI 267
L A + ++ K+ D+ S+ I K ++D E + QR +V P L +
Sbjct: 2014 LKAQLSQLRDQNNKLDNDLASQSRDVITLKEENDKANEVIKQLQRALVGKTEGDVPVLVV 2073
Query: 268 IGEEDSLEDEGEVVSDWLVNEIDKEI 345
E EGE + + E KE+
Sbjct: 2074 ENYETGFPPEGEDIQVQALQERIKEL 2099
>SB_53618| Best HMM Match : DHquinase_I (HMM E-Value=6.1)
Length = 303
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 382 KEEDIVVWVDPLDGTSEYT-QGFLEHVTVLIGIAVNETPVAGVIHQP 519
K++ VV + +D TSE + F EH T++ G+ GVI +P
Sbjct: 46 KKKKTVVLLIGIDSTSEIEDEKFTEHKTIIKGVLAGSRDFTGVIIKP 92
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +1
Query: 457 VTVLIGI--AVNETPVAGVIHQPYYKNIVEGDKKIGRTIWG 573
V VLIG+ + P+AGVI+QP+ K G WG
Sbjct: 1480 VCVLIGVYDEITGQPIAGVINQPFIKYNETTQTWTGGKTWG 1520
>SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1929
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -3
Query: 620 SGGGAGVNPPTPTPCSPQIVL 558
SGG + V+P +P+PC P++ L
Sbjct: 1640 SGGSSPVSPRSPSPCEPRLPL 1660
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 216 SRPICFCLIVVFTLFHYTKFPFAHYIANDFPSS 118
+RP C CL VFTL+ T+ P + PS+
Sbjct: 1327 TRPPCSCLPFVFTLYPRTRVPPVRVYPSCLPST 1359
>SB_7991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/61 (24%), Positives = 24/61 (39%)
Frame = +1
Query: 364 PNLQEVKEEDIVVWVDPLDGTSEYTQGFLEHVTVLIGIAVNETPVAGVIHQPYYKNIVEG 543
P L+ +K V+ D G QGF+ ++ + I V P Y + +G
Sbjct: 115 PFLENIKNIKAVICCDQFPGVISAVQGFIHRKSIKVAIVVGIAPEGDQRLYSYEDLVQQG 174
Query: 544 D 546
D
Sbjct: 175 D 175
>SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05)
Length = 576
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 295 EGEVVSDWLVNEIDKEILKLQCPPNL 372
E EVV +L NEI+KEI+ L C L
Sbjct: 256 EEEVVFGFLKNEIEKEIIYLTCREGL 281
>SB_56469| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-12)
Length = 652
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +1
Query: 253 PNLKIIGEEDSLEDEGEVVSDWLVNEIDKEILKLQCPPNLQEVKEEDIVVWVDPLDG 423
PN +I D L D+ E + D + +E L+ + P+L++ D+V+ V L G
Sbjct: 47 PNSRISTITDKLRDQ-EAILDEQEQYMRRECLEFKGIPSLEDENTNDLVIQVAQLAG 102
>SB_49525| Best HMM Match : 2-Hacid_dh_C (HMM E-Value=5.2e-10)
Length = 779
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 253 DIELQVMQQYSVEQTYLLLFDSRLY 179
DIE+ +QQY QTY ++ D+ LY
Sbjct: 279 DIEILSIQQYRKNQTYKIVGDAYLY 303
>SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05)
Length = 406
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 295 EGEVVSDWLVNEIDKEILKLQCPPNL 372
E EVV +L NEI+KEI L C L
Sbjct: 256 EEEVVFGFLKNEIEKEIANLTCREGL 281
>SB_36596| Best HMM Match : PSP (HMM E-Value=3.3e-18)
Length = 855
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 370 LQEVKEEDIVVWVDPLDGTSEYTQG 444
LQ+V ED V+W+DP+ G + + G
Sbjct: 814 LQKVSFEDRVMWLDPVYGNIQVSSG 838
>SB_3490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1
Query: 259 LKIIGEEDSLEDEGEVVSDWLVNEIDKEILKLQCPPNLQEVKEED 393
LK EE+S E+E E D LV + E LK+ Q+ EED
Sbjct: 25 LKEAEEEESSEEEDEEEDDDLVYDNKAEQLKVVVEKQPQQAIEED 69
>SB_42380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 580 GVGVGGFTPAPPP 618
G GVGG TP PPP
Sbjct: 786 GEGVGGITPPPPP 798
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,582,404
Number of Sequences: 59808
Number of extensions: 416377
Number of successful extensions: 3342
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3338
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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