Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0073
(346 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-591|AAF45913.2| 942|Drosophila melanogaster CG32778-PA... 28 2.8
M21329-1|AAA28608.1| 916|Drosophila melanogaster protein ( D.me... 27 5.0
AE014297-3375|AAS65198.1| 920|Drosophila melanogaster CG10367-P... 27 5.0
AE014297-3374|AAF56175.1| 920|Drosophila melanogaster CG10367-P... 27 5.0
BT001652-1|AAN71407.1| 862|Drosophila melanogaster RE44147p pro... 27 6.5
AY089627-1|AAL90365.1| 577|Drosophila melanogaster RE41145p pro... 27 8.7
AY060233-1|AAL25272.1| 334|Drosophila melanogaster GH03065p pro... 27 8.7
AE014298-1998|AAF48341.1| 611|Drosophila melanogaster CG12480-P... 27 8.7
AE013599-1439|AAM68660.2| 589|Drosophila melanogaster CG13164-P... 27 8.7
AE013599-1438|AAM68659.1| 589|Drosophila melanogaster CG13164-P... 27 8.7
AE013599-1437|AAM68658.1| 681|Drosophila melanogaster CG13164-P... 27 8.7
AE013599-1436|AAF58537.2| 832|Drosophila melanogaster CG13164-P... 27 8.7
>AE014298-591|AAF45913.2| 942|Drosophila melanogaster CG32778-PA
protein.
Length = 942
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 79 PGCDNSSGCPIENHSLHLSLASCP 8
PGCD S G N+S H SL+ CP
Sbjct: 798 PGCDGS-GHVTGNYSSHRSLSGCP 820
>M21329-1|AAA28608.1| 916|Drosophila melanogaster protein (
D.melanogaster 3-hydroxy-3-methyglutaryl coenzyme A
reductase (HMG CoA) gene, completecds. ).
Length = 916
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 49 SGNHCCCHSPVRSGLCR*HVHRFVTKCTLETA 144
SGN CC P + R VT+CT+ A
Sbjct: 706 SGNFCCDKKPAAINWIKGRGKRVVTECTISAA 737
>AE014297-3375|AAS65198.1| 920|Drosophila melanogaster CG10367-PB,
isoform B protein.
Length = 920
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 49 SGNHCCCHSPVRSGLCR*HVHRFVTKCTLETA 144
SGN CC P + R VT+CT+ A
Sbjct: 710 SGNFCCDKKPAAINWIKGRGKRVVTECTISAA 741
>AE014297-3374|AAF56175.1| 920|Drosophila melanogaster CG10367-PA,
isoform A protein.
Length = 920
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 49 SGNHCCCHSPVRSGLCR*HVHRFVTKCTLETA 144
SGN CC P + R VT+CT+ A
Sbjct: 710 SGNFCCDKKPAAINWIKGRGKRVVTECTISAA 741
>BT001652-1|AAN71407.1| 862|Drosophila melanogaster RE44147p
protein.
Length = 862
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 23 T*ME*MVFNRATTAVVTARCDLDSAVDMFIASSPNAPWRLRSIL 154
T +E + N+A T + CDL S V +I++ NA RSI+
Sbjct: 65 TLIEVLSMNKAYTLSASFDCDLSSLVGSYISNYTNADGVDRSII 108
>AY089627-1|AAL90365.1| 577|Drosophila melanogaster RE41145p
protein.
Length = 577
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1
Query: 109 EHVNGRVQIAPGCDNSSGCPIENHSLHLSLASCPP 5
EH+ V +APG D+SS P E HL A P
Sbjct: 108 EHLR-TVDVAPGVDSSSYQPAEYTPEHLKAAEVVP 141
>AY060233-1|AAL25272.1| 334|Drosophila melanogaster GH03065p
protein.
Length = 334
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 167 VYDHFKRAMKWKHDLGCSEKK 229
+YDH R + K+DL SEK+
Sbjct: 256 IYDHIPRIQRAKNDLEASEKR 276
>AE014298-1998|AAF48341.1| 611|Drosophila melanogaster CG12480-PA
protein.
Length = 611
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1
Query: 109 EHVNGRVQIAPGCDNSSGCPIENHSLHLSLASCPP 5
EH+ V +APG D+SS P E HL A P
Sbjct: 142 EHLR-TVDVAPGVDSSSYQPAEYTPEHLKAAEVVP 175
>AE013599-1439|AAM68660.2| 589|Drosophila melanogaster CG13164-PG,
isoform G protein.
Length = 589
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 167 VYDHFKRAMKWKHDLGCSEKK 229
+YDH R + K+DL SEK+
Sbjct: 256 IYDHIPRIQRAKNDLEASEKR 276
>AE013599-1438|AAM68659.1| 589|Drosophila melanogaster CG13164-PE,
isoform E protein.
Length = 589
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 167 VYDHFKRAMKWKHDLGCSEKK 229
+YDH R + K+DL SEK+
Sbjct: 256 IYDHIPRIQRAKNDLEASEKR 276
>AE013599-1437|AAM68658.1| 681|Drosophila melanogaster CG13164-PC,
isoform C protein.
Length = 681
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 167 VYDHFKRAMKWKHDLGCSEKK 229
+YDH R + K+DL SEK+
Sbjct: 256 IYDHIPRIQRAKNDLEASEKR 276
>AE013599-1436|AAF58537.2| 832|Drosophila melanogaster CG13164-PA,
isoform A protein.
Length = 832
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 167 VYDHFKRAMKWKHDLGCSEKK 229
+YDH R + K+DL SEK+
Sbjct: 256 IYDHIPRIQRAKNDLEASEKR 276
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,671,666
Number of Sequences: 53049
Number of extensions: 375832
Number of successful extensions: 830
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -