Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0072
(417 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1604.07 |atp4||F0-ATPase subunit|Schizosaccharomyces pombe|c... 27 1.2
SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces p... 26 2.0
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 2.7
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 26 2.7
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 25 3.6
SPAC6F6.08c |cdc16|bub2|two-component GAP Cdc16|Schizosaccharomy... 25 3.6
SPCC132.04c |||NAD-dependent glutamate dehydrogenase |Schizosacc... 25 4.7
SPAC23H4.08 |||RNA polymerase II associated protein |Schizosacch... 25 4.7
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 25 4.7
SPAC1F8.07c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 25 4.7
SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces po... 25 6.2
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 25 6.2
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 25 6.2
SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces po... 24 8.2
SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex ... 24 8.2
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 24 8.2
>SPBC1604.07 |atp4||F0-ATPase subunit|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.1 bits (57), Expect = 1.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 311 RILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNL 412
R++ + +K+++ P T DKT +P D K N+
Sbjct: 21 RLVLPSTRKFSLTPTTFDKTPSGRIPPDQKAANI 54
>SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 360
Score = 26.2 bits (55), Expect = 2.0
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +1
Query: 121 IDVFQIDIEP---EEAQKYLNSPPFTDPQLAGRTAVLP 225
ID+ +D P E AQKY+ + PFT P A LP
Sbjct: 195 IDIVAVDASPSRVEFAQKYVGAKPFT-PIAAKENESLP 231
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 2.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 346 HRILLQRSPQYSRFPFRSSSSVQEWGLL 263
HR+++Q +P Y R V E+ LL
Sbjct: 2067 HRLIIQMAPDYDRLTLLQKVEVFEYALL 2094
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 25.8 bits (54), Expect = 2.7
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +3
Query: 267 RPHSWTLLEERKGNREY*GLR*RSIRCVPIPRTRRSRCIC 386
R + WT + KG Y L+ + + P TRR R C
Sbjct: 59 RQNCWTKRNDPKGLTYYQLLKPSEVEILSRPETRRKRMAC 98
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 25.4 bits (53), Expect = 3.6
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 304 EIENTEDYVEEVYDASQYHGQDGL--GAYAYGYQTPESAK 417
E+ +ED V V + + ++ L G YAYGY+TP + +
Sbjct: 10 ELTTSED-VNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQ 48
>SPAC6F6.08c |cdc16|bub2|two-component GAP Cdc16|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 299
Score = 25.4 bits (53), Expect = 3.6
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 171 KQPTIHRSSISWPHRCLTIDQIQRPEVSHS*SRPHSWTLL 290
K P IS + +DQ++ E +S +RP+ W +L
Sbjct: 15 KSPENQSKCISRLRYMVMLDQVESDEGGNSSTRPYVWAVL 54
>SPCC132.04c |||NAD-dependent glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1106
Score = 25.0 bits (52), Expect = 4.7
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +1
Query: 145 EPEEAQKYLNSPPFTDPQLAGRTAVLPLI--KYNDP 246
E E+ YL+S P T P+L +AV I +Y DP
Sbjct: 180 ENEDLAIYLDSSPVTQPELDQSSAVEESISTRYLDP 215
>SPAC23H4.08 |||RNA polymerase II associated protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 277
Score = 25.0 bits (52), Expect = 4.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 310 ENTEDYVEEVYDASQYHGQDGLGAYAYG 393
++TEDYV ++Y+AS + +AYG
Sbjct: 175 QSTEDYVYDIYEASS--KEPNKPTFAYG 200
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 25.0 bits (52), Expect = 4.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 121 IDVFQIDIEPEEAQKYLNSPPF 186
+D F +++ P+EA KYL S F
Sbjct: 599 VDEFGVELGPKEAYKYLLSHQF 620
>SPAC1F8.07c |||pyruvate decarboxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 594
Score = 25.0 bits (52), Expect = 4.7
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = -1
Query: 321 LSILDFLSVLPVVSKSGAC--FNCA 253
L +LDFL P +S+ G C NCA
Sbjct: 36 LRLLDFLEYYPGLSEIGCCNELNCA 60
>SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 433
Score = 24.6 bits (51), Expect = 6.2
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +1
Query: 118 GIDVFQIDIEPEEAQKYLNSPPFTDPQLAGRTAVLPLIK 234
G+ V I + EE + Y N P DP A P+ K
Sbjct: 238 GLPVAHIQLTDEEFKTYKNMPIIFDPDCAYAFPPYPVTK 276
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 24.6 bits (51), Expect = 6.2
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = +2
Query: 17 YCDTSIELKKKRRNMLRMCL 76
+CD ++ L++ R N +R C+
Sbjct: 255 FCDLALRLREHRDNSIRRCI 274
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 24.6 bits (51), Expect = 6.2
Identities = 11/14 (78%), Positives = 12/14 (85%), Gaps = 1/14 (7%)
Frame = +3
Query: 339 IRC-VPIPRTRRSR 377
IRC +PIPRTR SR
Sbjct: 34 IRCDIPIPRTRTSR 47
>SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 471
Score = 24.2 bits (50), Expect = 8.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 23 DTSIELKKKRRNMLRMCLFSPWSQLCLRRRN 115
D + KK++R+ + LFS W + +RR+
Sbjct: 438 DNRLHHKKQKRSPISQLLFSRWLEETEKRRS 468
>SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex
subunit Sld3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 668
Score = 24.2 bits (50), Expect = 8.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 245 RGFAQLKQAPLLDTTGRTERKSR 313
R F+QLK LLD+ +RKSR
Sbjct: 329 REFSQLKLKDLLDSRDSGKRKSR 351
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 24.2 bits (50), Expect = 8.2
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +3
Query: 171 KQPTIHRSSISWPHRCLTIDQIQRPEVS 254
K P + ++ W +RCL + + P S
Sbjct: 444 KNPQVKTETLRWLNRCLQLTDVCPPRAS 471
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,743,836
Number of Sequences: 5004
Number of extensions: 33779
Number of successful extensions: 106
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 146319408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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