Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0064
         (526 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0161 - 18757122-18757331,18757931-18758488                       31   0.43 
11_01_0799 + 7035380-7036148,7036587-7037080                           31   0.75 
11_01_0679 - 5550070-5550201,5550309-5550454,5550577-5551219           30   1.3  
02_01_0232 + 1543597-1543800,1544189-1544377,1544695-1544859,154...    30   1.3  
01_01_0145 + 1327172-1327362,1327491-1328169                           29   1.7  
10_08_0961 + 21869612-21869773,21869869-21869956,21870047-218702...    29   3.0  
05_03_0066 + 7980038-7981468                                           27   7.0  
10_01_0305 + 3366206-3366326,3366368-3366471,3367252-3367302           27   9.2  

>01_05_0161 - 18757122-18757331,18757931-18758488
          Length = 255

 Score = 31.5 bits (68), Expect = 0.43
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -1

Query: 238 LPGPCPHVVANSLTSVQPLNNGYT*FLES 152
           LP P PHV++N +  +Q L N YT  L S
Sbjct: 180 LPRPTPHVISNIIKIMQNLRNAYTLALPS 208


>11_01_0799 + 7035380-7036148,7036587-7037080
          Length = 420

 Score = 30.7 bits (66), Expect = 0.75
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
 Frame = +2

Query: 275 GESINKTVKKDKDA---DNLLDQYEDYEPAEYQEVLYNEDRPCPRDCICSVSQ--GYRQA 439
           G+   K+ KK K+     NLL      + +++   +++E    P DC  S+ Q  G    
Sbjct: 333 GKPRGKSAKKLKELAGITNLLSSGSILKESDFASDVHSETDSTPSDCSVSLLQKMGVEMC 392

Query: 440 KCSFLEIGTQKFGDDILDLV 499
             S  E+   K G   LDLV
Sbjct: 393 GLSLEEVAESKLGGQKLDLV 412


>11_01_0679 - 5550070-5550201,5550309-5550454,5550577-5551219
          Length = 306

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 356 EYQEVLYNEDRPCPRDCICSVSQGYRQAKCSFLEIGTQKF 475
           + +E  Y++   CP D  C V Q + QAK   L   +QKF
Sbjct: 225 DLEECPYDDCDNCPSDNNCKVLQAFSQAKNLALVADSQKF 264


>02_01_0232 +
           1543597-1543800,1544189-1544377,1544695-1544859,
           1545199-1545459,1546059-1546271,1546365-1546587,
           1547974-1548149
          Length = 476

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 391 LSQRLHMLCISGIQTSQVQLPRNRY 465
           L QRL +LCI G+ T  +++ R+RY
Sbjct: 445 LMQRLTVLCIRGVSTYPIKIIRSRY 469


>01_01_0145 + 1327172-1327362,1327491-1328169
          Length = 289

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -3

Query: 425 PEIQSICSLW-DRACPRCTKPLGIPRVR 345
           P      S W DRACP C +P+G  R R
Sbjct: 70  PRAAPAASSWMDRACPSCNEPIGDIRCR 97


>10_08_0961 +
           21869612-21869773,21869869-21869956,21870047-21870277,
           21870371-21870538,21870808-21871001,21871151-21871234,
           21871315-21871434,21871621-21871714,21871813-21871973,
           21873237-21873313,21873738-21873932,21874487-21874559,
           21874635-21874721,21874906-21875043,21875181-21875383,
           21875469-21875631,21875861-21875992
          Length = 789

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 15/38 (39%), Positives = 16/38 (42%)
 Frame = -3

Query: 446 CTWLVCIPEIQSICSLWDRACPRCTKPLGIPRVRNPHI 333
           C  L C P IQ    +  R CP C  P G   VR   I
Sbjct: 752 CFHLFCSPCIQRNLEIRHRKCPGCGTPFGQSDVREVKI 789


>05_03_0066 + 7980038-7981468
          Length = 476

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = -2

Query: 195 QFSHSITVTLDFWNLALRSSDVLTRSMKEKQMKSWHTVT 79
           +F   + +TL  +  A ++  VL R +KEK+++S  TVT
Sbjct: 371 RFEGQLALTLLHYGNAGKAKKVLDRKLKEKKVESNSTVT 409


>10_01_0305 + 3366206-3366326,3366368-3366471,3367252-3367302
          Length = 91

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 362 GIPRVRNPHIDPI 324
           G PR+RNPH+ P+
Sbjct: 8   GTPRIRNPHVSPM 20


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,706,202
Number of Sequences: 37544
Number of extensions: 310202
Number of successful extensions: 898
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1154538620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)