Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0063
(551 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48384| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_19841| Best HMM Match : Myb_DNA-binding (HMM E-Value=1.1) 29 1.9
SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_58699| Best HMM Match : UCR_14kD (HMM E-Value=3.6e-37) 29 3.3
SB_53071| Best HMM Match : TSP_1 (HMM E-Value=4.3e-05) 29 3.3
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_47033| Best HMM Match : WAP (HMM E-Value=1.8e-38) 28 4.4
SB_52148| Best HMM Match : EGF (HMM E-Value=0) 28 5.8
SB_4999| Best HMM Match : EGF_CA (HMM E-Value=0) 28 5.8
SB_19034| Best HMM Match : Metallothio (HMM E-Value=9) 27 7.7
SB_17493| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_9658| Best HMM Match : Exo_endo_phos (HMM E-Value=1.1) 27 7.7
SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_22331| Best HMM Match : fn3 (HMM E-Value=7.1e-14) 27 7.7
SB_51898| Best HMM Match : No HMM Matches (HMM E-Value=.) 23 7.8
>SB_48384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1678
Score = 32.7 bits (71), Expect = 0.21
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 353 SPRCICKDNYFRNDSGICVCAQECRD 276
S +C CK Y NDS +CV EC +
Sbjct: 808 SYKCSCKRGYAHNDSNVCVDVNECTE 833
>SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4924
Score = 32.7 bits (71), Expect = 0.21
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = -1
Query: 449 NEVWCPSPPPCLQETCDDVDLPPVPCNEFIKSSPRCICKDNYFRNDSGIC--VCAQECRD 276
NE+ C S P TC+ D P +E+ RCICKD Y N + V A +C+D
Sbjct: 184 NEIGCCSNPCVGNATCESGDGP----DEY-----RCICKDGYMGNGTTCIAEVFATDCQD 234
Query: 275 IN 270
++
Sbjct: 235 LH 236
>SB_19841| Best HMM Match : Myb_DNA-binding (HMM E-Value=1.1)
Length = 753
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 280 RHS*AQTQIPLSFLK*LSLQMHLGLL--FINSLQGTGGRSTSSQVSCKQGGGD 432
+H+ TQI L + +LQ + +IN LQG R+TS+ + GGGD
Sbjct: 424 QHTQLLTQIYLMSREDPTLQQEASVCKQYINELQGFSDRATSAHLIMALGGGD 476
>SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Frame = -1
Query: 410 ETCDDVDLPPVPCNEFIKSSP---RCICKDNYFRNDSGICVCAQECRDINAP 264
E D P PCN F SP +C+ + ND CVC C + P
Sbjct: 923 EAMDVTASPSAPCNGFSCDSPPYSKCVVQ-----NDKPTCVCQLNCPNTGQP 969
>SB_58699| Best HMM Match : UCR_14kD (HMM E-Value=3.6e-37)
Length = 116
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +2
Query: 374 KVPEEGRHHRRFLVNRAVVTGTRLRWV 454
++PEE R+ R F + RA+ T +++W+
Sbjct: 55 RIPEEERNLRNFRIVRAIDTTMKMKWL 81
>SB_53071| Best HMM Match : TSP_1 (HMM E-Value=4.3e-05)
Length = 755
Score = 28.7 bits (61), Expect = 3.3
Identities = 26/85 (30%), Positives = 31/85 (36%), Gaps = 4/85 (4%)
Frame = -1
Query: 512 SETDRRCILSTDCPPVNCTRPNEVWCPSPPPCLQETCDDVDLPPV--PCNEFIKSSPRCI 339
SE C + C R SPP L E CD PP PCN +P
Sbjct: 294 SECSTTCSTGVTTRQLECRRLEASGVMSPP-ILPENCDHAIKPPTSEPCNSDNPCTPNEE 352
Query: 338 CKDNYFRNDSGICVCAQ--ECRDIN 270
+ F +S I V A E D+N
Sbjct: 353 IEIACFVTNSDIAVLADLTENLDLN 377
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 28.7 bits (61), Expect = 3.3
Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 16/104 (15%)
Frame = -1
Query: 542 CICKLNYKRRSETDRRCILSTDCPP-----VNCTRP---NEVWCPSPPPCLQETCDDVD- 390
C+CK+ + +E C+ + C P C P C +TC DVD
Sbjct: 361 CVCKMGFSSATEDGLSCVAESACVPACGDNAVCAGPIDDKRCECKDGFQGDGQTCTDVDE 420
Query: 389 ----LPPVPCNEFIKSSPR---CICKDNYFRNDSGICVCAQECR 279
L N F ++P C C Y + D C EC+
Sbjct: 421 CTDGLHDCNVNAFCTNTPGTFVCRCIRGY-QGDGRTCADVDECK 463
>SB_47033| Best HMM Match : WAP (HMM E-Value=1.8e-38)
Length = 667
Score = 28.3 bits (60), Expect = 4.4
Identities = 27/95 (28%), Positives = 36/95 (37%), Gaps = 1/95 (1%)
Frame = -1
Query: 515 RSETDRRCILSTDCPPVNCTRPNEVWCPSPPPCLQETCDDVDLPPVPCNEFIKSSPRCIC 336
+ +TDR C C C R N + P P P TC + P CN ++ C
Sbjct: 495 KCQTDRDCQDQFKCCFDGC-RYNCI-LPKPDPAEHSTCPVMSRIPYMCN---PTTHACDT 549
Query: 335 KDNYFRNDSGICVCAQEC-RDINAPDYNRKKRDSK 234
D+ G C+ C R APD R + K
Sbjct: 550 DDDCI---GGAKCCSDSCSRRCTAPDQTRTEPQVK 581
>SB_52148| Best HMM Match : EGF (HMM E-Value=0)
Length = 1055
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 6/72 (8%)
Frame = -1
Query: 521 KRRSETDRRCILSTDC----PPVNCTRPNEV--WCPSPPPCLQETCDDVDLPPVPCNEFI 360
K + + +RRC S + P + C N W P C TC C E
Sbjct: 230 KGKCQINRRCYKSNETSSFSPCLQCNPDNSRHNWT-HVPNCHTGTCQSNPCGRGLCKELT 288
Query: 359 KSSPRCICKDNY 324
+++ CICK+ +
Sbjct: 289 RTTYMCICKEGF 300
>SB_4999| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1054
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 338 CKDNYFRNDSGICVCAQECRD 276
CK Y NDS +CV EC +
Sbjct: 34 CKRGYAYNDSNVCVDVNECTE 54
>SB_19034| Best HMM Match : Metallothio (HMM E-Value=9)
Length = 228
Score = 27.5 bits (58), Expect = 7.7
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 14/93 (15%)
Frame = -1
Query: 500 RRCILSTDCPPVNCTRPNEVW-CPSPPPCLQETCDDVDLPPVPCNEFIKSSPR-CICKDN 327
R CI +T C V V+ C S C+ T + P+ N ++ S R CIC
Sbjct: 2 RMCICATQCECVFVPLNANVYLCHSMRMCICATQCECVFVPLNANVYLCHSMRMCICATQ 61
Query: 326 ------------YFRNDSGICVCAQECRDINAP 264
Y + +C+CA +C + P
Sbjct: 62 CECVFVPLNANVYLCHSMRMCICATQCECVFVP 94
Score = 27.5 bits (58), Expect = 7.7
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 14/93 (15%)
Frame = -1
Query: 500 RRCILSTDCPPVNCTRPNEVW-CPSPPPCLQETCDDVDLPPVPCNEFIKSSPR-CICKDN 327
R CI +T C V V+ C S C+ T + P+ N ++ S R CIC
Sbjct: 28 RMCICATQCECVFVPLNANVYLCHSMRMCICATQCECVFVPLNANVYLCHSMRMCICATQ 87
Query: 326 ------------YFRNDSGICVCAQECRDINAP 264
Y + +C+CA +C + P
Sbjct: 88 CECVFVPLNANVYLCHSMRMCICATQCECVFVP 120
Score = 27.5 bits (58), Expect = 7.7
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 14/93 (15%)
Frame = -1
Query: 500 RRCILSTDCPPVNCTRPNEVW-CPSPPPCLQETCDDVDLPPVPCNEFIKSSPR-CICKDN 327
R CI +T C V V+ C S C+ T + P+ N ++ S R CIC
Sbjct: 54 RMCICATQCECVFVPLNANVYLCHSMRMCICATQCECVFVPLNANVYLCHSMRMCICATQ 113
Query: 326 ------------YFRNDSGICVCAQECRDINAP 264
Y + +C+CA +C + P
Sbjct: 114 CECVFVPLNANVYLCHSMRMCICATQCECVFVP 146
Score = 27.5 bits (58), Expect = 7.7
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 14/93 (15%)
Frame = -1
Query: 500 RRCILSTDCPPVNCTRPNEVW-CPSPPPCLQETCDDVDLPPVPCNEFIKSSPR-CICKDN 327
R CI +T C V V+ C S C+ T + P+ N ++ S R CIC
Sbjct: 80 RMCICATQCECVFVPLNANVYLCHSMRMCICATQCECVFVPLNANVYLCHSMRMCICATQ 139
Query: 326 ------------YFRNDSGICVCAQECRDINAP 264
Y + +C+CA +C + P
Sbjct: 140 CECVFVPLNANVYLCHSMRMCICATQCECVFVP 172
Score = 27.5 bits (58), Expect = 7.7
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 14/93 (15%)
Frame = -1
Query: 500 RRCILSTDCPPVNCTRPNEVW-CPSPPPCLQETCDDVDLPPVPCNEFIKSSPR-CICKDN 327
R CI +T C V V+ C S C+ T + P+ N ++ S R CIC
Sbjct: 106 RMCICATQCECVFVPLNANVYLCHSMRMCICATQCECVFVPLNANVYLCHSMRMCICATQ 165
Query: 326 ------------YFRNDSGICVCAQECRDINAP 264
Y + +C+CA +C + P
Sbjct: 166 CECVFVPLNANVYLCHSMRMCICATQCECVFVP 198
Score = 27.5 bits (58), Expect = 7.7
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 14/93 (15%)
Frame = -1
Query: 500 RRCILSTDCPPVNCTRPNEVW-CPSPPPCLQETCDDVDLPPVPCNEFIKSSPR-CICKDN 327
R CI +T C V V+ C S C+ T + P+ N ++ S R CIC
Sbjct: 132 RMCICATQCECVFVPLNANVYLCHSMRMCICATQCECVFVPLNANVYLCHSMRMCICATQ 191
Query: 326 ------------YFRNDSGICVCAQECRDINAP 264
Y + +C+CA +C + P
Sbjct: 192 CECVFVPLNAYVYLCHSMRMCICATQCECVFVP 224
>SB_17493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 718
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 193 KIPTYVIRFDVSNTKLNSVISYYFSELD*VQFCFFFN 83
K+P+YV +SN L SV S +F E + F+N
Sbjct: 116 KLPSYVQSLILSNNGLTSVPSQFFQEQGIINLQSFWN 152
>SB_9658| Best HMM Match : Exo_endo_phos (HMM E-Value=1.1)
Length = 277
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 323 SNYLCRCI*DCFL*IRYKVPEEGRHHRRF 409
+NYLC+ I D +L P G+ H RF
Sbjct: 233 TNYLCKIIKDNYLWQLIDFPTRGKEHSRF 261
>SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3160
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = -1
Query: 509 ETDRRCILSTDCPPVNCTRPNEVWCPSPPPCLQETCDDV 393
E + + LS CP CT N C+ + C DV
Sbjct: 2307 EIENKLSLSEPCPGNTCTDSNVKTADPKDSCVADACSDV 2345
>SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4475
Score = 27.5 bits (58), Expect = 7.7
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -1
Query: 383 PVPCNEFIKSSPRCICKDNYFRNDSGICVCAQEC 282
P PC++ + + P +CK +++ +C C C
Sbjct: 4211 PDPCDDHVCTKPYSVCK---VKDEKPVCECPSRC 4241
>SB_22331| Best HMM Match : fn3 (HMM E-Value=7.1e-14)
Length = 908
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 493 AFCLQIALL*IALDPTKSGARHHRPV-YKKPAMMSTFLRYLVTNL 362
A+ L+ L +A D +SG RH R + Y P + S F ++++L
Sbjct: 488 AYFLESEALHVAADACRSGGRHVRTLGYVAPLLTSLFAMLVMSDL 532
>SB_51898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1712
Score = 23.4 bits (48), Expect(2) = 7.8
Identities = 8/24 (33%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = -1
Query: 338 CKDNYFRNDSGICVCAQ-ECRDIN 270
C+ N+FR ++G C+ A+ +C ++
Sbjct: 1383 CEPNFFRCNTGKCISARWQCDQLD 1406
Score = 22.2 bits (45), Expect(2) = 7.8
Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 7/67 (10%)
Frame = -1
Query: 509 ETDRRCILSTDCPP--VNCTRPNEVWCPSPPPC-----LQETCDDVDLPPVPCNEFIKSS 351
+ ++ C + C P ++C + P C + D+ D PP N+F +
Sbjct: 1296 DDEKNCGEPSTCKPNYISCASMKAICIPKMWRCDGMLDCTDKSDEEDCPPCKENQFRCDN 1355
Query: 350 PRCICKD 330
+CI D
Sbjct: 1356 GQCIDGD 1362
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,147,683
Number of Sequences: 59808
Number of extensions: 328435
Number of successful extensions: 856
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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