Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0059
         (377 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC26F1.06 |gpm1||monomeric 2,3-bisphosphoglycerate |Schizosacc...   113   9e-27
SPAC1687.21 ||SPAC222.01|phosphoglycerate mutase family |Schizos...    51   7e-08
SPCC1620.13 |||phosphoglycerate mutase family|Schizosaccharomyce...    34   0.009
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ...    31   0.045
SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces p...    26   2.3  
SPAC31G5.12c |maf1|n150|repressor of RNA polymerase III Maf1 |Sc...    25   3.0  
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac...    25   3.0  
SPAC1002.19 |urg1||GTP cyclohydrolase II |Schizosaccharomyces po...    25   5.2  
SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protei...    24   9.1  
SPAC31G5.11 |pac2||cAMP-independent regulatory protein Pac2 |Sch...    24   9.1  
SPBC14C8.08c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual       24   9.1  

>SPAC26F1.06 |gpm1||monomeric 2,3-bisphosphoglycerate
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 211

 Score =  113 bits (272), Expect = 9e-27
 Identities = 52/94 (55%), Positives = 69/94 (73%)
 Frame = +2

Query: 95  IVMIRHGESEWNQKNLFCGWFDADLSDKGRQEAVAAGKALKAEGYQFDIAHTSVLKRAQI 274
           +V+ RHGESEWN+ NLF GW D  LS+ G +EA   G+ LK+ GY+FDIA TS L+RAQ 
Sbjct: 10  LVLTRHGESEWNKLNLFTGWKDPALSETGIKEAKLGGERLKSRGYKFDIAFTSALQRAQK 69

Query: 275 TLNSILKEIGQPDIPVEKTWRLNERHYGGLTGLN 376
           T   IL+E+G+P++   K+ +LNER+YG L GLN
Sbjct: 70  TCQIILEEVGEPNLETIKSEKLNERYYGDLQGLN 103


>SPAC1687.21 ||SPAC222.01|phosphoglycerate mutase family
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 209

 Score = 50.8 bits (116), Expect = 7e-08
 Identities = 29/95 (30%), Positives = 52/95 (54%)
 Frame = +2

Query: 92  KIVMIRHGESEWNQKNLFCGWFDADLSDKGRQEAVAAGKALKAEGYQFDIAHTSVLKRAQ 271
           K+ +IRHG+++ N++ +  G  D +L++ GR +A    + L       D    S +KR +
Sbjct: 2   KVFLIRHGQTDQNKRGILQGSVDTNLNETGRLQAKLLAQRLLP--LDIDQIFCSSMKRCR 59

Query: 272 ITLNSILKEIGQPDIPVEKTWRLNERHYGGLTGLN 376
            T+   L+   +P++P+  T  + ER YG L G+N
Sbjct: 60  ETIAPYLEL--KPEVPIVYTDLIRERVYGDLEGMN 92


>SPCC1620.13 |||phosphoglycerate mutase family|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 282

 Score = 33.9 bits (74), Expect = 0.009
 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
 Frame = +2

Query: 68  SNKMPAKYKIVMIRHGESEWNQKNLFCG-WFDADLSDKGRQEAVAAGKALKAEGYQFDIA 244
           S++  +K+  +++RH ESE N + +  G   D++L+  G  +A    K+++         
Sbjct: 47  SSQNDSKFTCLLVRHAESEHNVRGIRAGARIDSELTVHGYNQAKKLAKSIR--NLDIVCV 104

Query: 245 HTSVLKRAQITLNSILKEIGQP 310
           ++S  KRA+ T   I K    P
Sbjct: 105 YSSPQKRAKRTAEEITKVANCP 126


>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 408

 Score = 31.5 bits (68), Expect = 0.045
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = +2

Query: 47  SRYEIYLSNKMPAKYKIVMIRHGESEWNQKNLFCGWFDADLSDKGRQEA 193
           SR   YLSN    +  I + RHGES++N +    G  D+ LS +G + A
Sbjct: 193 SRIVYYLSNLRTRRRSIWLSRHGESQFNVEGKIGG--DSSLSPQGLKYA 239


>SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 669

 Score = 25.8 bits (54), Expect = 2.3
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 50  RYEIYLSNKMPAKYKIVMIRHGESEWNQKNLFCG 151
           R+  Y +N + AKY  ++      E NQKN+  G
Sbjct: 40  RFLNYDNNALEAKYNEIITEEVSQEPNQKNVIVG 73


>SPAC31G5.12c |maf1|n150|repressor of RNA polymerase III Maf1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 215

 Score = 25.4 bits (53), Expect = 3.0
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 257 LKRAQITLNSILKEIGQPDIPVEKTWRLNERH 352
           L R   ++NS L  IG+  + V   W + +RH
Sbjct: 95  LSRVVDSVNSTLNNIGRGRLSVNGIWEIIDRH 126


>SPCC736.14 |dis1||microtubule-associated protein Dis1
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 882

 Score = 25.4 bits (53), Expect = 3.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 100 YDSSWRIRMEPEESLL 147
           +D SW++R E  ESLL
Sbjct: 15  FDKSWKVRFEAYESLL 30


>SPAC1002.19 |urg1||GTP cyclohydrolase II |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 439

 Score = 24.6 bits (51), Expect = 5.2
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +2

Query: 221 EGYQFDIAHTSVLKRAQITLNSILKEIGQPDIPVEKTWRLNER 349
           EGY  D+  T  + RA + +  I + +    +P++    LNE+
Sbjct: 146 EGY--DVRPTIAITRAHLQVTEIQRSVENGSLPIDGKIVLNEK 186


>SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat
           protein|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 945

 Score = 23.8 bits (49), Expect = 9.1
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 242 AHTSVLKRAQITLNSILKEIGQPDIPVEKT 331
           AH +   ++ +  N  +++I   DIP+ KT
Sbjct: 399 AHAADATKSSVAHNEKVEDISDSDIPIMKT 428


>SPAC31G5.11 |pac2||cAMP-independent regulatory protein Pac2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 235

 Score = 23.8 bits (49), Expect = 9.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -2

Query: 349 PLVQSPSFLNRYIWLTDLL*DRVQCN 272
           PLVQ+P FL  Y    D+L ++V C+
Sbjct: 199 PLVQAPKFLAPY----DILVEKVACS 220


>SPBC14C8.08c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 182

 Score = 23.8 bits (49), Expect = 9.1
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
 Frame = -1

Query: 377 CSVQ*GHHNASRSISKF--------SQQVYLADRSPLR*SSV*SGHVLEQTCEQ--CQTD 228
           CS+   HH A +SI K+         +Q+   +   LR SS  S  +L+Q   Q   +  
Sbjct: 10  CSLSAYHHTAKQSIDKYKSVLEEERKKQLLRTETGLLRQSSSRSSSLLDQRIRQITAKDK 69

Query: 227 SLQLLKPYRQQQLLDDL 177
           ++ LL+    + LL ++
Sbjct: 70  TVNLLRKTLNRPLLHEV 86


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,451,509
Number of Sequences: 5004
Number of extensions: 25157
Number of successful extensions: 53
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 122233080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)