Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0059
(377 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0769 + 31616644-31616875,31616980-31617203,31617308-316174... 63 6e-11
11_01_0229 - 1771701-1774164,1774694-1774847,1774980-1775055,177... 57 5e-09
12_01_0227 - 1718726-1721183,1721804-1721957,1722090-1722165,172... 55 2e-08
12_01_0228 - 1726856-1727049,1727280-1727355,1727454-1727585,172... 50 5e-07
11_01_0231 - 1791754-1791947,1792178-1792253,1792352-1792483,179... 50 8e-07
01_01_0965 - 7589659-7589785,7590188-7590317,7590339-7590438,759... 38 0.002
11_01_0309 + 2312786-2313211,2313311-2313527,2313613-2313731,231... 38 0.003
04_04_0207 + 23602065-23604315,23604611-23605116 29 1.6
09_02_0258 - 6380702-6380758,6380767-6380794,6381352-6381467,638... 28 2.1
05_07_0027 + 27140626-27141457,27143101-27143901,27144838-271448... 27 6.5
05_07_0026 - 27136386-27137264 27 6.5
04_04_0440 - 25219961-25221529 27 6.5
10_02_0098 + 5286827-5287019,5287380-5287476,5287872-5287992,528... 26 8.6
06_01_0062 - 529833-530917,531392-531434 26 8.6
01_05_0560 - 23288078-23288370,23288448-23288733 26 8.6
01_01_0991 + 7851791-7851919,7852770-7852904,7853064-7853153,785... 26 8.6
>02_05_0769 +
31616644-31616875,31616980-31617203,31617308-31617426,
31617528-31617684,31617928-31618029,31618111-31618230,
31618761-31618855,31619900-31619984,31620090-31620180,
31620534-31620618,31620702-31620806,31621019-31621894,
31622016-31622124,31622266-31622414,31622518-31622737
Length = 922
Score = 63.3 bits (147), Expect = 6e-11
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = +2
Query: 74 KMPAKYKIVMIRHGESEWNQKNLFCGWFDADLSDKGRQEAVAAGKALKAEGYQFDIAHTS 253
K ++ +++IRHGES WN+KNLF G D L+ KG EA+ AGK + D+ +TS
Sbjct: 75 KKSSESALILIRHGESLWNEKNLFTGCVDVPLTPKGVDEAIEAGKRIC--NIPVDVIYTS 132
Query: 254 VLKRAQITLNSILKEIGQPDIPV 322
L RAQ+T + + + +P+
Sbjct: 133 SLIRAQMTAMLAMMQHRRKKVPI 155
>11_01_0229 -
1771701-1774164,1774694-1774847,1774980-1775055,
1775439-1775477,1778516-1778674,1778741-1778851,
1779014-1779064,1779173-1779256
Length = 1045
Score = 56.8 bits (131), Expect = 5e-09
Identities = 34/94 (36%), Positives = 51/94 (54%)
Frame = +2
Query: 92 KIVMIRHGESEWNQKNLFCGWFDADLSDKGRQEAVAAGKALKAEGYQFDIAHTSVLKRAQ 271
++V++RHGE+ WN + G D +L++ G+Q+AV + L E I ++S LKRA
Sbjct: 10 ELVVVRHGETSWNASRIVQGQMDPELNEIGKQQAVVVARRLAREARPAAI-YSSDLKRAA 68
Query: 272 ITLNSILKEIGQPDIPVEKTWRLNERHYGGLTGL 373
T I K ++ + T L ERH G L GL
Sbjct: 69 ETAEIIAKACDVSNLML--TEALRERHMGYLQGL 100
>12_01_0227 -
1718726-1721183,1721804-1721957,1722090-1722165,
1722327-1722485,1722552-1722662,1722791-1722841,
1722948-1723192,1723745-1725278
Length = 1595
Score = 54.8 bits (126), Expect = 2e-08
Identities = 32/94 (34%), Positives = 52/94 (55%)
Frame = +2
Query: 92 KIVMIRHGESEWNQKNLFCGWFDADLSDKGRQEAVAAGKALKAEGYQFDIAHTSVLKRAQ 271
++V++RHGE+ WN + G D +L++ G+Q+AV + L + I ++S LKRA
Sbjct: 575 ELVVVRHGETSWNSSRIVQGQMDPELNEIGKQQAVVVARRLARKARPAAI-YSSDLKRAA 633
Query: 272 ITLNSILKEIGQPDIPVEKTWRLNERHYGGLTGL 373
T+ I K ++ + + L ERH G L GL
Sbjct: 634 ETVKIIAKVCDVSNLVLIEA--LRERHMGYLQGL 665
>12_01_0228 -
1726856-1727049,1727280-1727355,1727454-1727585,
1727665-1727775,1727892-1727942,1728114-1728275,
1729558-1729584
Length = 250
Score = 50.4 bits (115), Expect = 5e-07
Identities = 31/94 (32%), Positives = 49/94 (52%)
Frame = +2
Query: 92 KIVMIRHGESEWNQKNLFCGWFDADLSDKGRQEAVAAGKALKAEGYQFDIAHTSVLKRAQ 271
++V++RHGE+ N + G D +L++ GRQ+AV + L E + ++S LKRA
Sbjct: 45 EVVVVRHGETSANALCIIQGQMDIELNEAGRQQAVMVARRLAKEAKPVAV-YSSDLKRAA 103
Query: 272 ITLNSILKEIGQPDIPVEKTWRLNERHYGGLTGL 373
T +I ++ + L ERH G L GL
Sbjct: 104 ETAQTIATACNVSNLVLSPA--LRERHMGDLHGL 135
>11_01_0231 -
1791754-1791947,1792178-1792253,1792352-1792483,
1792563-1792673,1792790-1792840,1793012-1793122
Length = 224
Score = 49.6 bits (113), Expect = 8e-07
Identities = 31/94 (32%), Positives = 49/94 (52%)
Frame = +2
Query: 92 KIVMIRHGESEWNQKNLFCGWFDADLSDKGRQEAVAAGKALKAEGYQFDIAHTSVLKRAQ 271
++V++RHGE+ N + G D +L++ GRQ+AV + L E + ++S LKRA
Sbjct: 19 EVVVVRHGETSANALCIIQGQTDIELNEAGRQQAVMVARRLAKEAKPVAV-YSSDLKRAA 77
Query: 272 ITLNSILKEIGQPDIPVEKTWRLNERHYGGLTGL 373
T +I ++ + L ERH G L GL
Sbjct: 78 ETAQTIATACNVSNLVLSPA--LRERHMGDLHGL 109
>01_01_0965 -
7589659-7589785,7590188-7590317,7590339-7590438,
7590524-7590643,7590910-7591145,7591585-7591714
Length = 280
Score = 38.3 bits (85), Expect = 0.002
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Frame = +2
Query: 65 LSNKM-PAKYKIVMIRHGESEWNQKNLFCGWFDAD-LSDKGRQEAVAAGKALKAEGYQFD 238
L+N+M KI ++RHG S WN ++ G + L++ G ++A AL +FD
Sbjct: 94 LTNEMLTLSKKITLVRHGLSTWNAESRVQGSSNLSVLTETGAKQAEKCRDAL--ANMKFD 151
Query: 239 IAHTSVLKRAQITLNSILKEIGQPDIPVEKTWRLNERHYGGLTGL 373
+ +S + RA+ T I K +P I ++ L E H L G+
Sbjct: 152 VCFSSPISRAKSTAEIIWKGKEEPLIFLDS---LKEAHLFFLEGM 193
>11_01_0309 +
2312786-2313211,2313311-2313527,2313613-2313731,
2313921-2314019,2314498-2314551,2314635-2314733,
2314838-2314945,2315418-2315694,2316051-2316160,
2316425-2316493,2316608-2316714,2316754-2316792,
2317126-2317171,2317593-2317619
Length = 598
Score = 37.5 bits (83), Expect = 0.003
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 92 KIVMIRHGESEWNQKNLFCGWFDAD-LSDKGRQEAVAAGKALKAEGYQFDIAHTSVLKRA 268
++V++RHG+S WN + G D L+ KG +A + L ++ FD TS L R+
Sbjct: 55 RVVLVRHGQSTWNAEGRIQGSSDISVLTPKGESQAETSRLMLLSD--SFDACFTSPLARS 112
Query: 269 QITLNSILKEIGQPDIP 319
+ T I + IP
Sbjct: 113 RRTAEIIWADRDDDLIP 129
>04_04_0207 + 23602065-23604315,23604611-23605116
Length = 918
Score = 28.7 bits (61), Expect = 1.6
Identities = 15/69 (21%), Positives = 28/69 (40%)
Frame = +2
Query: 119 SEWNQKNLFCGWFDADLSDKGRQEAVAAGKALKAEGYQFDIAHTSVLKRAQITLNSILKE 298
S W++ +C W + G VA G +L+ G DIA + + + S+
Sbjct: 59 STWSRSTPYCNWSHVTCTAGGGGGGVAVGLSLQGLGLSGDIAAEPLCRVPGLAALSLASN 118
Query: 299 IGQPDIPVE 325
+P++
Sbjct: 119 TFNQTVPLQ 127
>09_02_0258 -
6380702-6380758,6380767-6380794,6381352-6381467,
6382318-6382435,6382542-6382721,6383214-6383313,
6384315-6384618
Length = 300
Score = 28.3 bits (60), Expect = 2.1
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +2
Query: 80 PAKYKIVMIRHGESEWNQKNLFCGWFDADLSDKGRQEAVAAGKALKAEGYQFDIAHTSVL 259
P + +++++RHGES + D LS GR A++ L+ G+ ++ S
Sbjct: 80 PPRRRLILLRHGESAAGGR--LTRDHDRPLSKAGRAAAISVSNKLQQMGWIPELVLCSDA 137
Query: 260 KRAQITL 280
R + TL
Sbjct: 138 TRTKETL 144
>05_07_0027 +
27140626-27141457,27143101-27143901,27144838-27144873,
27145133-27145420,27145836-27146289,27146520-27146964
Length = 951
Score = 26.6 bits (56), Expect = 6.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 314 IPVEKTWRLNERHYGGL 364
+PV K W +NE++YG L
Sbjct: 204 VPVLKDWLMNEKYYGKL 220
>05_07_0026 - 27136386-27137264
Length = 292
Score = 26.6 bits (56), Expect = 6.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 314 IPVEKTWRLNERHYGGL 364
+PV K W +NE++YG L
Sbjct: 211 VPVLKDWLMNEKYYGKL 227
>04_04_0440 - 25219961-25221529
Length = 522
Score = 26.6 bits (56), Expect = 6.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 265 CPDYTELYLKGDRSARYTC*ENLEIER 345
CP ++ LK R Y C ENL++ R
Sbjct: 418 CPSLVKVKLKRCRGVSYECIENLKVVR 444
>10_02_0098 +
5286827-5287019,5287380-5287476,5287872-5287992,
5288458-5288511,5288868-5288918,5289004-5289099,
5289709-5289807,5289989-5290111,5290666-5290809,
5290902-5290973,5291053-5291128,5291208-5291350,
5291453-5291561,5291629-5291816,5292045-5292134,
5292256-5292438,5293187-5293360,5293466-5293537
Length = 694
Score = 26.2 bits (55), Expect = 8.6
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +2
Query: 191 AVAAGKALKAEGYQFDIAHTSVLKRAQITLNSILKEIGQPDIPV 322
A+ A + +EG +F +AH V +++K Q D+P+
Sbjct: 574 AIDAAQTALSEGKRFCVAHVDVGLDTSAIREAVIKVKDQKDLPI 617
>06_01_0062 - 529833-530917,531392-531434
Length = 375
Score = 26.2 bits (55), Expect = 8.6
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 80 PAKYKIVMIRHGESEWN 130
P +IV++RHGESE N
Sbjct: 87 PRPRRIVLVRHGESEGN 103
>01_05_0560 - 23288078-23288370,23288448-23288733
Length = 192
Score = 26.2 bits (55), Expect = 8.6
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +1
Query: 238 HCSHVCSKTC-PDYTELYLKGDRS 306
+CS+ C KTC PD LY S
Sbjct: 50 YCSYACDKTCQPDKPTLYSSSSSS 73
>01_01_0991 +
7851791-7851919,7852770-7852904,7853064-7853153,
7853750-7853785,7854256-7854417
Length = 183
Score = 26.2 bits (55), Expect = 8.6
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = +2
Query: 95 IVMIRHGESEWNQKNLFCGWFDADLSDKGRQEAVAAGKALKAEGYQFDIAHTSVLKRAQ 271
I I H + Q+ ++ D +++ ++AV A L EG+ F +A +++ Q
Sbjct: 41 IAQINHRVTTRIQRRIYGHATDVEITPLNEEKAVQAATDLIGEGFIFSVAVAALIFEVQ 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,422,046
Number of Sequences: 37544
Number of extensions: 160369
Number of successful extensions: 421
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 612769692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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