Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0059
         (377 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61953-3|AAC48071.3|  491|Caenorhabditis elegans Hypothetical pr...    29   0.83 
U23452-1|AAK31545.2|  284|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z81054-11|CAB02888.1|  430|Caenorhabditis elegans Hypothetical p...    28   2.5  
Z70683-7|CAA94593.1|  430|Caenorhabditis elegans Hypothetical pr...    28   2.5  
U41558-2|AAK39245.2|  457|Caenorhabditis elegans Hypothetical pr...    27   3.4  
AC006708-18|AAF60424.2|  450|Caenorhabditis elegans Hypothetical...    27   4.5  
AC006708-17|AAK68884.2|  435|Caenorhabditis elegans Hypothetical...    27   4.5  

>U61953-3|AAC48071.3|  491|Caenorhabditis elegans Hypothetical
           protein R08C7.5 protein.
          Length = 491

 Score = 29.5 bits (63), Expect = 0.83
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 230 QFDIAHTSVLKRAQITLNSILKEIGQPDIPVEKTWRLNERHY 355
           QF+ A   V       LN + K++   D P E+  +L +R+Y
Sbjct: 42  QFEKASNKVFAELFAKLNDVAKKVATEDFPAEQLQKLIDRNY 83


>U23452-1|AAK31545.2|  284|Caenorhabditis elegans Hypothetical
           protein R07G3.5 protein.
          Length = 284

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 23/76 (30%), Positives = 33/76 (43%)
 Frame = +2

Query: 74  KMPAKYKIVMIRHGESEWNQKNLFCGWFDADLSDKGRQEAVAAGKALKAEGYQFDIAHTS 253
           K  A   I +IRHG+   + +          L+  GR++A   GK L     +F     S
Sbjct: 90  KATATRNIFLIRHGQYHLDHEVKM-------LTPLGREQAELLGKRLANSDIKFTNMTMS 142

Query: 254 VLKRAQITLNSILKEI 301
            + RA  T N ILK +
Sbjct: 143 TMVRATETANIILKHL 158


>Z81054-11|CAB02888.1|  430|Caenorhabditis elegans Hypothetical
           protein F01D4.8 protein.
          Length = 430

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
 Frame = +2

Query: 188 EAVAAGKALKAEGYQFDIAHTSVLKRAQITLNSILKEIGQPDIPVEKTWR-LNERHY--G 358
           E V     +   GY +DI      +   +T N I + +  PDI      R LNE  Y  G
Sbjct: 281 EKVWRAPGIAGTGYGYDIVPIQYGETTSLTKNVINEAMKMPDIATVAAMRILNEMGYNAG 340

Query: 359 GLTGLN 376
             T LN
Sbjct: 341 ASTSLN 346


>Z70683-7|CAA94593.1|  430|Caenorhabditis elegans Hypothetical
           protein F01D4.8 protein.
          Length = 430

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
 Frame = +2

Query: 188 EAVAAGKALKAEGYQFDIAHTSVLKRAQITLNSILKEIGQPDIPVEKTWR-LNERHY--G 358
           E V     +   GY +DI      +   +T N I + +  PDI      R LNE  Y  G
Sbjct: 281 EKVWRAPGIAGTGYGYDIVPIQYGETTSLTKNVINEAMKMPDIATVAAMRILNEMGYNAG 340

Query: 359 GLTGLN 376
             T LN
Sbjct: 341 ASTSLN 346


>U41558-2|AAK39245.2|  457|Caenorhabditis elegans Hypothetical
           protein K02B2.1 protein.
          Length = 457

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = +2

Query: 47  SRYEIYLSNKMPAKYKIVMIRHGESEWNQKNLFCGWFDADLSDKGRQEAVAAGKALKAE 223
           SR   +L N       I + RHG+SE+N      G  D+ L++ G++ A A     + E
Sbjct: 232 SRVVYFLMNIHLLPRSIYLTRHGQSEYNAMGRLGG--DSPLTEDGQKYASALADFFEEE 288


>AC006708-18|AAF60424.2|  450|Caenorhabditis elegans Hypothetical
           protein Y110A7A.6a protein.
          Length = 450

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +2

Query: 47  SRYEIYLSNKMPAKYKIVMIRHGESEWNQKNLFCGWFDADLSDKG 181
           SR   +L N       I + RHGESE+N+     G  D+ LS+ G
Sbjct: 233 SRVVYFLMNIHLLPRSIYLSRHGESEYNRIGRLGG--DSPLSENG 275


>AC006708-17|AAK68884.2|  435|Caenorhabditis elegans Hypothetical
           protein Y110A7A.6b protein.
          Length = 435

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +2

Query: 47  SRYEIYLSNKMPAKYKIVMIRHGESEWNQKNLFCGWFDADLSDKG 181
           SR   +L N       I + RHGESE+N+     G  D+ LS+ G
Sbjct: 239 SRVVYFLMNIHLLPRSIYLSRHGESEYNRIGRLGG--DSPLSENG 281


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,063,654
Number of Sequences: 27780
Number of extensions: 140831
Number of successful extensions: 436
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)