Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0054
(431 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.23
SPAC1039.02 |||phosphoprotein phosphatase |Schizosaccharomyces p... 28 0.70
SPAC19G12.15c |tpp1||trehalose-6-phosphate phosphatase Tpp1|Schi... 26 2.8
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 25 5.0
SPBC1289.06c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 5.0
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 25 6.6
SPCC18B5.11c |cds1||replication checkpoint kinase Cds1|Schizosac... 25 6.6
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 25 6.6
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 24 8.7
SPAC5H10.12c |||acetylglucosaminyltransferase|Schizosaccharomyce... 24 8.7
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 24 8.7
SPAC3A11.07 |||NADH dehydrogenase|Schizosaccharomyces pombe|chr ... 24 8.7
SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|ch... 24 8.7
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 24 8.7
SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 24 8.7
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 29.5 bits (63), Expect = 0.23
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = -2
Query: 382 TYTLFAILSSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEA 236
TY+ I SS+ L+ S L++++S +ASSS PI SSS VS A
Sbjct: 665 TYSSSVIPSSSTLVSSSSSLIVSSS-PVASSSSSPIP-SSSSLVSTYSA 711
>SPAC1039.02 |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 27.9 bits (59), Expect = 0.70
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 312 FASKSRDLRSIKGVELKMANKVYVHDGGKLDE 407
FA + ++L KGV+L M + +HDG L +
Sbjct: 79 FALRMKELADFKGVDLLMVDTGDLHDGNGLSD 110
>SPAC19G12.15c |tpp1||trehalose-6-phosphate phosphatase
Tpp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 25.8 bits (54), Expect = 2.8
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 26 DAGHKHEDNHLFVYYRHRGNGSRHKSL*CAQKW 124
D K E +F YY R GS + CA W
Sbjct: 653 DMSWKKEVRRIFQYYTDRTQGSSIEEKRCAMTW 685
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 25.0 bits (52), Expect = 5.0
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = -3
Query: 417 LQNSRLVFHHHERILYSPF*AQRL*LI 337
L+ +++ H ++++SPF +QR+ L+
Sbjct: 901 LEKQWTLYYSHSKLMFSPFSSQRIILL 927
>SPBC1289.06c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 481
Score = 25.0 bits (52), Expect = 5.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 99 NLSNVLKNGNDNFTARMFTEVV 164
N N+LK ND AR +TE V
Sbjct: 56 NSQNLLKQLNDEMKARKYTETV 77
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 24.6 bits (51), Expect = 6.6
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = -1
Query: 398 FSTIMNVYFIRHFKLNAFN*SKITAFTREFCSYSIVVREAD 276
F ++N YF+ + NA ++ T ++C ++ R+A+
Sbjct: 1072 FLEVLNSYFMSNTDSNAKRLQQLRRMTMDYCKRMLLDRKAN 1112
>SPCC18B5.11c |cds1||replication checkpoint kinase
Cds1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 24.6 bits (51), Expect = 6.6
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -1
Query: 167 FHYFGKHSGCEVIVS---IFEHIREICDGCHCRDGDSKQTNDCLH 42
F FG+H CEV+++ + EI G H D D + LH
Sbjct: 59 FWRFGRHKSCEVVLNGPRVSNFHFEIYQG-HRNDSDESENVVFLH 102
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 24.6 bits (51), Expect = 6.6
Identities = 19/82 (23%), Positives = 40/82 (48%)
Frame = -2
Query: 358 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLF 179
SS P + + + + + SV +S G+P + SSS S + ++ + N E++
Sbjct: 95 SSNPRMPKSAHPISSRSVSASSHFGRPASAVSSSLNSSDDVRSMSDESMESYNDEKSVNA 154
Query: 178 PGLFFTTSVNILAVKLSFPFLS 113
L TT + ++++++ LS
Sbjct: 155 SAL-RTTEDRLRSMEMAYAQLS 175
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 24.2 bits (50), Expect = 8.7
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 48 TIICLFTIAIAAMAAVTNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSA 200
T +C F + IA N S +LKN + + ++KN G ++ A
Sbjct: 351 TSVCWFLLDIAFYGVNLNQSVILKNIGFSTGTNEYRTLMKNAIGNLIIAVA 401
>SPAC5H10.12c |||acetylglucosaminyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 24.2 bits (50), Expect = 8.7
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +3
Query: 51 IICLFTIAIAAMAAVTNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSV 209
II + T+ L++ L + +NF V+K PGK +S F++
Sbjct: 25 IIVMTTLVFNGHDYKQTLNDRLTSLKNNFVEENDNAVLKEEPGKYTYMSLFTM 77
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 24.2 bits (50), Expect = 8.7
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 361 LSSTPLIDRRSRLLLANSVRIA-SSSGKPIAFKSSSWVSPSEA 236
LSS+ +I S +L++S A SSS SSS+ SP+ +
Sbjct: 35 LSSSSVIPSSSSSMLSSSSATAISSSSSSSPLSSSSFTSPASS 77
>SPAC3A11.07 |||NADH dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 551
Score = 24.2 bits (50), Expect = 8.7
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 361 LSSTPLIDRRSR-LLLANSVRIASSSGKPIAFKSSSW 254
+ +PL SR L LANSVR AS + +S W
Sbjct: 16 IPKSPLALSASRNLRLANSVRFASDAASSPKSTTSKW 52
>SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 24.2 bits (50), Expect = 8.7
Identities = 17/75 (22%), Positives = 28/75 (37%)
Frame = +3
Query: 144 RMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASK 323
R+F + N+ + AFS P L + + D E + F D D + K
Sbjct: 31 RLFVGNLGNDVNDESLYQAFSEYPSLVKTKVVRDREGKTRGFGFVSFKDSDQFLKAWREK 90
Query: 324 SRDLRSIKGVELKMA 368
+ + V+L A
Sbjct: 91 NGKYIGSRPVKLSRA 105
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 24.2 bits (50), Expect = 8.7
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 48 TIICLFTIAIAAMAAVTNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSA 200
T +C F + IA N S +LKN + + ++KN G ++ A
Sbjct: 352 TSVCWFLLDIAFYGVNLNQSVILKNIGFSSGTNEYRTLMKNAIGNLIIAVA 402
>SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1096
Score = 24.2 bits (50), Expect = 8.7
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 60 LFTIAIAAMAAVTNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVL 212
L + +A + VT+ ++NG D FT +V +N S S ++L
Sbjct: 145 LMPLETSAYSLVTSTPAYIQNGLDTFTIAKLRQVYGSNSLVSTKKSIVTIL 195
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,687,899
Number of Sequences: 5004
Number of extensions: 31944
Number of successful extensions: 110
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 154067960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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