Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0052
         (615 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0412 + 25023758-25023826,25023927-25023991,25024082-250241...    28   6.8  

>04_04_0412 +
           25023758-25023826,25023927-25023991,25024082-25024145,
           25024806-25024940,25025029-25025160,25025470-25025553,
           25025638-25025736,25025992-25026083,25026280-25026352,
           25026476-25026628,25026721-25026840,25026926-25026979,
           25027188-25027271,25027431-25027505,25027585-25027728,
           25028016-25028123,25028340-25028459,25028909-25029102,
           25029193-25029319
          Length = 663

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 456 KTKVLCIQNLKFINILLHY 512
           ++ +LC   LKF+N LLHY
Sbjct: 495 RSSILCRSMLKFVNSLLHY 513


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,111,639
Number of Sequences: 37544
Number of extensions: 221403
Number of successful extensions: 294
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 294
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)