Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0052
         (615 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical p...    29   3.5  
AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical ...    29   3.5  

>Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical
            protein M01G12.12 protein.
          Length = 1579

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 19/61 (31%), Positives = 32/61 (52%)
 Frame = -3

Query: 361  EMSAKDRHS*INLSIRKKKRESKQHINRYIKLAMH*IENPPSLKKVKCVTSIIL*LNYW* 182
            +++ K + S +NL  + K +++     RYI  A    E+   L+K+  VTS I   N+W 
Sbjct: 1501 KLTEKSKVSQLNLRRQDKNKKTSNSTVRYIVSASGTFESTQQLRKLVTVTSPI--KNHWE 1558

Query: 181  G 179
            G
Sbjct: 1559 G 1559


>AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical
            protein M01G12.12 protein.
          Length = 1579

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 19/61 (31%), Positives = 32/61 (52%)
 Frame = -3

Query: 361  EMSAKDRHS*INLSIRKKKRESKQHINRYIKLAMH*IENPPSLKKVKCVTSIIL*LNYW* 182
            +++ K + S +NL  + K +++     RYI  A    E+   L+K+  VTS I   N+W 
Sbjct: 1501 KLTEKSKVSQLNLRRQDKNKKTSNSTVRYIVSASGTFESTQQLRKLVTVTSPI--KNHWE 1558

Query: 181  G 179
            G
Sbjct: 1559 G 1559


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,434,965
Number of Sequences: 27780
Number of extensions: 236308
Number of successful extensions: 444
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)