Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0045
         (494 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0585 - 4774877-4775008,4775150-4775308,4776030-4776131,477...    29   2.1  
12_01_0803 + 7371349-7372146,7372301-7372675                           29   2.7  
03_06_0737 + 35879723-35879990,35880105-35880201,35880464-358805...    28   3.6  
02_03_0199 + 16263549-16263644,16264941-16265899,16267140-162677...    28   3.6  
09_06_0123 - 20997498-20997512,20998015-20998100,20999066-209991...    28   4.7  
08_02_1247 + 25578291-25578305,25579084-25579197,25579497-255796...    28   4.7  
08_01_0191 + 1590948-1591607,1591694-1592176,1592449-1592451,159...    27   8.3  

>12_01_0585 -
           4774877-4775008,4775150-4775308,4776030-4776131,
           4776480-4776485,4776655-4777008
          Length = 250

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = +3

Query: 183 ILQWISYILPLTKSTESLRSMLQRGWTINVPTVYSGFISTGIWIAIYLTTSIL 341
           +LQ +SY+ P   STE  +       T +  TV   F+ TG+W+A+ + T  L
Sbjct: 102 VLQELSYLEPQPDSTEEKKCA-----TFDKHTVTMLFMITGLWLALVVYTDDL 149


>12_01_0803 + 7371349-7372146,7372301-7372675
          Length = 390

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 150 GIIWPVEGMHLILQWISYIL 209
           G+IW   G HL+ QW+S  L
Sbjct: 369 GVIWKTMGWHLLQQWMSLAL 388


>03_06_0737 +
           35879723-35879990,35880105-35880201,35880464-35880591,
           35880686-35880767,35880855-35880918,35880930-35881022,
           35881120-35881178,35881391-35881826,35882050-35882120,
           35882201-35882351
          Length = 482

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = -2

Query: 178 CIPSTGHMMPQSNTIGRNEPRAR*VAVLSVSQTQDTTKPKVIPHNPVISVRNV 20
           C+ S+GH    +N +   EP A    VLS +Q+   + P V+P   VI++ ++
Sbjct: 370 CMGSSGHGSTSANAV---EPHA---IVLSSTQSMPPSTPFVLPDTKVIAIAHL 416


>02_03_0199 +
           16263549-16263644,16264941-16265899,16267140-16267791,
           16267895-16267981,16268253-16268381,16269990-16270036,
           16271337-16271438,16272720-16272843,16272981-16273028,
           16273934-16274026,16274325-16274408,16274536-16274619,
           16274751-16274819,16275531-16275590,16275946-16276017,
           16276957-16277064,16278162-16278238,16278391-16278474,
           16278617-16278728,16278778-16278810,16278811-16278900,
           16279012-16279077,16279163-16279258,16279446-16279497,
           16279723-16279775,16279998-16280018
          Length = 1165

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 137 HRQERAKSQVSSCSVGVTNTGHDETKSHS 51
           HR E+ KS + SCS+ +T+     T +HS
Sbjct: 141 HRSEKKKSTLPSCSI-ITDEASTSTSNHS 168


>09_06_0123 -
           20997498-20997512,20998015-20998100,20999066-20999198,
           20999264-20999341,21000130-21000216,21001164-21001254,
           21001338-21001488,21001567-21002296,21002404-21002820
          Length = 595

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
 Frame = -2

Query: 88  SQTQDTTKPKVIPH---NPVISVRNVTSCPPP 2
           S ++D   P V PH   NP+    N TS PPP
Sbjct: 137 SASEDLIVPSVQPHPVANPISGGSNPTSSPPP 168


>08_02_1247 +
           25578291-25578305,25579084-25579197,25579497-25579628,
           25579726-25579854,25580024-25580421,25580503-25580602,
           25580734-25580793,25580881-25580967,25581058-25581186,
           25581260-25581559
          Length = 487

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +1

Query: 184 FYSGSATFFRLRNLQSLSDRCYREVGLSMYPLSTLDSYQPEFG*LFI*PQVF 339
           F S S+TF     + S S RC+  V  S     +L+    ++  + I P+++
Sbjct: 195 FSSSSSTFSLKHRVDSWSPRCHYNVNTSSDKYDSLNEKSEQYNGMIICPRIY 246


>08_01_0191 +
           1590948-1591607,1591694-1592176,1592449-1592451,
           1592555-1592992
          Length = 527

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 236 ERLCRFRKRKNVADPL*NQVHTFNG 162
           E +C  + R+NVADP+   ++T NG
Sbjct: 329 EAVCLMKLRENVADPMKADLYTPNG 353


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,622,850
Number of Sequences: 37544
Number of extensions: 277047
Number of successful extensions: 655
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1035514020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)