Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0043
         (699 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              23   2.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   4.9  
M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee homeobox-...    22   6.4  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   6.4  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   6.4  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   8.5  

>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 183 GCAMVDSCSNILTGDQ 230
           G  M+DSCSN+ + D+
Sbjct: 106 GVEMIDSCSNVDSSDK 121


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 85  FPWHRWGILKY 53
           F +H+WGIL Y
Sbjct: 507 FSFHQWGILVY 517


>M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H40. ).
          Length = 74

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 396 VTMTQVIQWVQNPRTVTEAKN 458
           +T TQV  W QN RT  + +N
Sbjct: 47  LTETQVKIWFQNRRTKWKKQN 67


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 384 RCGFEGSRLSNTRKLPKIQGCFSTKLHGNKVLK 286
           R GFE  R   +  L  ++ CF   L G++  K
Sbjct: 169 RTGFEHKRQPTSIDLNAVRLCFQVFLEGSQKRK 201


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 384 RCGFEGSRLSNTRKLPKIQGCFSTKLHGNKVLK 286
           R GFE  R   +  L  ++ CF   L G++  K
Sbjct: 169 RTGFEHKRQPTSIDLNAVRLCFQVFLEGSQKRK 201


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 15/52 (28%), Positives = 20/52 (38%)
 Frame = +2

Query: 356 DRRDPSKPQRRLLRYHDTSDPMGTKPTYRD*SQELRAVERKVLRRRKPCMLG 511
           D R   K +  LLR  D+ D   +  TY        A    V  +   C+LG
Sbjct: 63  DGRVGGKRRNILLRRTDSMDSQNSASTYNSFLSSDSASSGNVYCKCDDCLLG 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,169
Number of Sequences: 438
Number of extensions: 5017
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)