Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0042
         (642 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81101-7|CAB03200.1|  613|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z70752-6|CAA94759.1|  613|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AF016687-1|AAC48094.2|  315|Caenorhabditis elegans Dumpy : short...    29   2.8  
Z68159-6|CAA92287.5|  485|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z70208-4|CAC42306.1|  879|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AF200707-1|AAF15884.1|  879|Caenorhabditis elegans UNC-84B protein.    28   6.5  
AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein.    28   6.5  
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z81101-7|CAB03200.1|  613|Caenorhabditis elegans Hypothetical
           protein F25B3.6 protein.
          Length = 613

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +2

Query: 368 TSLYSLHDFEINIDLDLPAAKSVSSQPKQVTTKVKETGPKRSLNLEEYKKR 520
           T + SLHDF+  +D+DL   K  S+ P+    K       + ++L +Y+ R
Sbjct: 547 TDISSLHDFD--LDIDLGKLKDFST-PESSGNKRPSISSSKGVSLSDYRMR 594


>Z70752-6|CAA94759.1|  613|Caenorhabditis elegans Hypothetical
           protein F25B3.6 protein.
          Length = 613

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +2

Query: 368 TSLYSLHDFEINIDLDLPAAKSVSSQPKQVTTKVKETGPKRSLNLEEYKKR 520
           T + SLHDF+  +D+DL   K  S+ P+    K       + ++L +Y+ R
Sbjct: 547 TDISSLHDFD--LDIDLGKLKDFST-PESSGNKRPSISSSKGVSLSDYRMR 594


>AF016687-1|AAC48094.2|  315|Caenorhabditis elegans Dumpy : shorter
           than wild-typeprotein 9 protein.
          Length = 315

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -1

Query: 87  SASGSCC*CTRCSVWTSLQPGD 22
           S SGSCC CT+ S     QPGD
Sbjct: 83  SGSGSCCACTQGSPGPRGQPGD 104


>Z68159-6|CAA92287.5|  485|Caenorhabditis elegans Hypothetical
           protein C33D9.6 protein.
          Length = 485

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +2

Query: 386 HDFEINIDLD-LPAAKSVSSQPKQVTTKVKETGPKRSL--NLEEYKKRHGLI 532
           H++E   D   L  AK + +  K VTT +   GP   +  N  E KK HG +
Sbjct: 374 HNYEDLDDAKFLELAKIIETTKKDVTTLINTEGPSEDVSGNFMEAKKIHGAL 425


>Z70208-4|CAC42306.1|  879|Caenorhabditis elegans Hypothetical
           protein F54B11.3b protein.
          Length = 879

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = -3

Query: 211 PAAL*FKVHDGLGVSPRERVVCFLSLFALT 122
           PA     VHD +GVS R R+  FLS F  T
Sbjct: 441 PAPSSSDVHDAVGVSWRIRIADFLSSFVAT 470


>Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical
           protein F54B11.3a protein.
          Length = 1111

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = -3

Query: 211 PAAL*FKVHDGLGVSPRERVVCFLSLFALT 122
           PA     VHD +GVS R R+  FLS F  T
Sbjct: 441 PAPSSSDVHDAVGVSWRIRIADFLSSFVAT 470


>AF200707-1|AAF15884.1|  879|Caenorhabditis elegans UNC-84B protein.
          Length = 879

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = -3

Query: 211 PAAL*FKVHDGLGVSPRERVVCFLSLFALT 122
           PA     VHD +GVS R R+  FLS F  T
Sbjct: 441 PAPSSSDVHDAVGVSWRIRIADFLSSFVAT 470


>AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein.
          Length = 1111

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = -3

Query: 211 PAAL*FKVHDGLGVSPRERVVCFLSLFALT 122
           PA     VHD +GVS R R+  FLS F  T
Sbjct: 441 PAPSSSDVHDAVGVSWRIRIADFLSSFVAT 470


>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
            F45E4.4 protein.
          Length = 2361

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 401  NIDLDLPAAKSVSSQPKQVTTKVKETGPKRS 493
            N + D+  AK+ +SQ    +TK   T PKRS
Sbjct: 1973 NDEFDVQWAKTTTSQTPSTSTKPTVTAPKRS 2003


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,598,469
Number of Sequences: 27780
Number of extensions: 197759
Number of successful extensions: 771
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)