Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0040
(714 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943... 66 2e-11
07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177... 63 2e-10
02_02_0078 + 6587491-6588021,6588160-6589151,6592430-6592607,659... 54 9e-08
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 54 1e-07
04_03_0582 + 17528335-17529790,17529913-17531651,17531814-175320... 49 4e-06
02_01_0473 - 3403547-3404241,3404455-3404983,3405299-3405477,340... 39 0.003
02_02_0604 - 12064451-12065683,12065729-12065827,12065858-120659... 33 0.17
08_01_0654 - 5639419-5641449 33 0.30
05_04_0392 - 20889699-20891726 32 0.52
02_05_0426 - 28881671-28881753,28882130-28882621,28882802-288828... 31 0.91
04_03_0093 - 11085882-11087339 30 1.6
02_03_0097 + 15166077-15166349,15166623-15166694,15166715-151671... 29 2.8
05_04_0052 - 17515344-17517353 29 3.7
03_02_0445 - 8551912-8552047,8552729-8552896,8553785-8554068,855... 29 3.7
09_05_0004 + 20021394-20023430 29 4.8
05_03_0062 - 7917596-7918129,7918279-7918447,7919007-7919182,791... 29 4.8
03_01_0460 - 3537608-3538228,3538457-3538669,3539938-3540051 29 4.8
07_03_0763 - 21331534-21331779,21331871-21332021,21332093-213323... 28 6.4
02_04_0350 + 22234632-22235145,22235277-22236209,22237253-222373... 28 6.4
06_02_0111 - 11958372-11958713,11959367-11959633,11959729-119601... 28 8.5
04_04_0466 + 25433678-25434007,25434118-25434176,25434345-254344... 28 8.5
>06_02_0297 -
13891954-13892556,13893019-13893855,13894179-13894394,
13895455-13895874,13896198-13896506
Length = 794
Score = 66.5 bits (155), Expect = 2e-11
Identities = 42/162 (25%), Positives = 80/162 (49%), Gaps = 2/162 (1%)
Frame = -1
Query: 624 EWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMRDE--SEVSQNQFGFM 451
E SS + + K ++ +++R I LM S+K K++A R++ VS N +GF+
Sbjct: 366 EILNSSFITLVPKKTSLETVNDFRPISLMGISLKIVTKLLAGRLQGVILKLVSDNHYGFI 425
Query: 450 PGRSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVPREVLWWSMKVKGVPGKYQR 271
G++ D + + +++ + + ++ +D EKA+D + + M+ G P K+
Sbjct: 426 KGKTIQDCPAWPFEYIHQCQQSKREIVLLKLDFEKAFDTIEHSAILSVMQHMGFPLKWIE 485
Query: 270 LVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFIL 145
V+ ++ AS+ V + F G+ QG LS LF+L
Sbjct: 486 WVQMVFSTASSAVLLNGVPGNSFKCRRGVRQGVPLSLLLFVL 527
>07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,
1778770-1778900,1779530-1779788,1779823-1780098,
1780100-1781352
Length = 1344
Score = 62.9 bits (146), Expect = 2e-10
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Frame = -1
Query: 603 VPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMRDE--SEVSQNQFGFMPGRSTTD 430
+ + + G D YR I L + S+K KV+A R++ + +Q GF+ GR ++
Sbjct: 973 IVLIQKPGKENTVDGYRPISLQNCSVKILSKVLATRLQRVFLRMIHLDQTGFLKGRCISE 1032
Query: 429 AIFSLRQLCEK-YRRASKNVHMVFVDLEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMY 253
+ +L + YRR + + +V +D KA+D V L+ + V+G P + ++ +
Sbjct: 1033 NLIYATELIQACYRRKCQTI-IVKLDFTKAFDSVIWSSLFKILAVRGFPENWISWIKGLL 1091
Query: 252 GRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFILIMDAL 130
+ + V GL QG LS YLFIL+ D L
Sbjct: 1092 SSSKSAVLLNGVPGRWICCKKGLLQGDPLSSYLFILVADVL 1132
>02_02_0078 +
6587491-6588021,6588160-6589151,6592430-6592607,
6592635-6592794,6592992-6593158,6593246-6593869
Length = 883
Score = 54.4 bits (125), Expect = 9e-08
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 4/179 (2%)
Frame = -1
Query: 558 YRGIKLMSHSMKAWEKVIARRMRD--ESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRA 385
+R I L + K KV+A R++ VS+ Q F+PGR TD+ + ++
Sbjct: 187 FRPISLCNVLYKIASKVLANRLKLFLPDIVSEFQSAFVPGRLITDSSLVAYECLNTIKKQ 246
Query: 384 S--KNVHMVFVDLEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDS 211
S K + +D+ KAYDR+ L + G + V +R +
Sbjct: 247 SNKKPFFALKIDMMKAYDRIEWSYLHGCLMRLGFEQDWINTVMRCVTSTRYAIRINGELT 306
Query: 210 DEFSVTVGLHQGSALSPYLFILIMDALTSDIQEEAPWCMLFADDIVLVGEEGPEIQRRL 34
D + G+ QG +SPYLF+L + L+ +Q++ L + G +GP I L
Sbjct: 307 DTVVPSRGIRQGDPISPYLFLLCTEGLSCMLQKKEQQGFLHG---IRNGRQGPPISHLL 362
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 54.0 bits (124), Expect = 1e-07
Identities = 31/116 (26%), Positives = 54/116 (46%)
Frame = -1
Query: 477 VSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVPREVLWWSMKV 298
+ +Q GF+ GR ++ + +L + ++ +D KA+D V + L+ + V
Sbjct: 2 IHMDQTGFLKGRCISENLIYATELIQACHARKCQTLIIKLDFAKAFDSVNWQSLFQILSV 61
Query: 297 KGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFILIMDAL 130
KG P + ++ + + + V + GL QG LSPYLFIL+ D L
Sbjct: 62 KGFPDNWISWIKNLLQTSKSAVLLHGIPGKWITCKKGLRQGDPLSPYLFILVADVL 117
>04_03_0582 + 17528335-17529790,17529913-17531651,17531814-17532035,
17532062-17533525
Length = 1626
Score = 48.8 bits (111), Expect = 4e-06
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
Frame = -1
Query: 705 WKFLKADGCTWLTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSM 526
W LK+D + L FQ MP+ +++V + K I + D YR I L +
Sbjct: 923 WGTLKSD----IILAVRNFFQSGLMPEGVNDTAIVLIPKKDQPIDLKD-YRPISLCNVVY 977
Query: 525 KAWEKVIARRMRD--ESEVSQNQFGFMPGRSTTD---AIFSLRQLCEKYRRASKNVHMVF 361
K K + R+R + VS+ Q F+ GR TD F +K ++A+
Sbjct: 978 KVVSKCLVNRLRPILDDLVSKEQSAFIQGRMITDNALLAFECFHSIQKNKKANSAACAYK 1037
Query: 360 VDLEKAYDRVPREVLWWSMKVKGVPGKYQRLVR 262
+DL KAYDRV L ++ G +++++ +
Sbjct: 1038 LDLSKAYDRVDWRFLELALNKLGFAHRWEKVAQ 1070
>02_01_0473 -
3403547-3404241,3404455-3404983,3405299-3405477,
3405868-3405952,3406136-3406482,3407061-3407159,
3408135-3408636
Length = 811
Score = 39.1 bits (87), Expect = 0.003
Identities = 31/99 (31%), Positives = 50/99 (50%)
Frame = -1
Query: 402 EKYRRASKNVHMVFVDLEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSA 223
+K +R ++N + +DL KAYDRV W+ + G QR+ G T+ +
Sbjct: 224 QKCKRENQNFCALKLDLSKAYDRVD-----WAF----LDGVLQRM-----GFGDTWRKWT 269
Query: 222 AGDSDEFSVTVGLHQGSALSPYLFILIMDALTSDIQEEA 106
D + GL QG LSPYLF+ I D L+ +++++
Sbjct: 270 MSCVDICPIR-GLRQGDPLSPYLFLFIADGLSHILEKKS 307
>02_02_0604 -
12064451-12065683,12065729-12065827,12065858-12065955,
12066782-12066924,12067233-12067729
Length = 689
Score = 33.5 bits (73), Expect = 0.17
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = -1
Query: 213 SDEFSVTVGLHQGSALSPYLFIL-IMDA-LTSDIQE--EAPWCMLFADDIVLVGEEG 55
SD F GL QG LSP LF+L M A L + + AP L+ADD V+ + G
Sbjct: 224 SDPFKPMRGLRQGDPLSPLLFVLKAMSAGLLDKVNQWSRAPNNSLYADDAVIFFKPG 280
>08_01_0654 - 5639419-5641449
Length = 676
Score = 32.7 bits (71), Expect = 0.30
Identities = 28/98 (28%), Positives = 43/98 (43%)
Frame = -1
Query: 429 AIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYG 250
A+ LR+ CE+ +RA N H V V++E +D V + + + +
Sbjct: 300 ALGKLRRECERAKRALSNQHQVRVEVESLFDGVDLSEPLSRARFEELNSDLFKKTMVPVR 359
Query: 249 RASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFILIMD 136
+A R + GD DE V VG GS P + L+ D
Sbjct: 360 KAMADARLSKGDIDEI-VLVG---GSTRIPKVQQLLKD 393
>05_04_0392 - 20889699-20891726
Length = 675
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -1
Query: 429 AIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRV 331
A+ LR+ CE+ +RA N H V V++E +D V
Sbjct: 300 ALGKLRRECERAKRALSNQHQVRVEIESLFDGV 332
>02_05_0426 -
28881671-28881753,28882130-28882621,28882802-28882864,
28883251-28883440,28883534-28883642,28883952-28884363,
28884967-28885196,28885294-28885403
Length = 562
Score = 31.1 bits (67), Expect = 0.91
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 280 FPWHSFHFHAPPQN 321
FPWH HF PPQN
Sbjct: 298 FPWHLLHFFIPPQN 311
>04_03_0093 - 11085882-11087339
Length = 485
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = -1
Query: 603 VPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMRDESEVSQNQFGFMPGRSTTDAI 424
VP+ + +I+ R IKL ++ K E+++A+ + ++ + F +P ++T D
Sbjct: 403 VPLSLWESNIECLHKLRKIKLHNYKGKPNERLLAKYLLSKATSLEQFFVTLPAKTTADRQ 462
Query: 423 FSLRQLCEKYRRASK 379
L KY RA+K
Sbjct: 463 LKLTNEL-KYWRANK 476
>02_03_0097 +
15166077-15166349,15166623-15166694,15166715-15167161,
15167579-15167794,15167873-15168213,15168329-15168947
Length = 655
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -1
Query: 624 EWCKSSLVPVFKSKGDIQVCDNYRGI 547
EW SS+VPV K G ++VC ++R +
Sbjct: 594 EWV-SSIVPVIKKNGKVRVCIDFRDL 618
>05_04_0052 - 17515344-17517353
Length = 669
Score = 29.1 bits (62), Expect = 3.7
Identities = 28/98 (28%), Positives = 42/98 (42%)
Frame = -1
Query: 429 AIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYG 250
A+ LR+ CE+ +RA H V V++E +D V + + + R A
Sbjct: 296 ALGKLRRECERAKRALSIQHQVRVEVESLFDGVDLSEPLSRARFEELNNDLFRKTMAPVR 355
Query: 249 RASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFILIMD 136
+A R + D DE V VG GS P + L+ D
Sbjct: 356 KAMADARLSNADIDEI-VLVG---GSTRIPKVRQLLRD 389
>03_02_0445 -
8551912-8552047,8552729-8552896,8553785-8554068,
8554143-8555386,8556901-8556967,8557059-8557150,
8557269-8557480,8558541-8558623,8559092-8559122,
8559770-8559951,8560557-8560616,8561092-8561289,
8561485-8561539,8562740-8562855,8563012-8563176,
8563310-8563483,8564134-8564333,8564778-8564882,
8565063-8565126,8566452-8566718
Length = 1300
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 573 QVCDNYRGIKLMSHSMKAWEKVIARRMRDESEVSQNQFGFMPGRSTTD 430
QVC N + +K ++ +K W++ R R++ + N G M GRS D
Sbjct: 382 QVCGNSKHVKFLNEWLKGWDE---RGHRNKQNIVTN--GSMNGRSCQD 424
>09_05_0004 + 20021394-20023430
Length = 678
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 635 PCLTSGAKVHSCLYLRAKVTYRY 567
PCL SG VHSC + +Y Y
Sbjct: 403 PCLASGRMVHSCAFQGGFASYLY 425
>05_03_0062 -
7917596-7918129,7918279-7918447,7919007-7919182,
7919235-7919360,7920196-7920342
Length = 383
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 189 GLHQGSALSPYLFILIMDALTS 124
GL QG +SPYLF+L + +S
Sbjct: 55 GLRQGDPISPYLFLLCAEVFSS 76
>03_01_0460 - 3537608-3538228,3538457-3538669,3539938-3540051
Length = 315
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = -1
Query: 432 DAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMY 253
DAI SLR LC K ++ ++ + +DL KA R E+ K++ + L A +
Sbjct: 83 DAIKSLRHLCPK--QSQDSLDNILLDLYKASGRTKEEIELLKQKLRKI-----YLGEAFH 135
Query: 252 GRASTYVRS 226
G+ + RS
Sbjct: 136 GKTTKRARS 144
>07_03_0763 -
21331534-21331779,21331871-21332021,21332093-21332330,
21332449-21332659,21332744-21332871,21333569-21333706,
21333825-21334644
Length = 643
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +2
Query: 284 PGTPFTFMLHHKTSRGTLSYAFSKSTNTMCTFLLARRYFSHNWRREKMASVVLRP 448
P P T ++ + A S T + +A + S +WRR ++A LRP
Sbjct: 265 PAPPVTAAGERSKNKRSAILAISMPTIALVLATIAAWFCSTSWRRRRLARKTLRP 319
>02_04_0350 +
22234632-22235145,22235277-22236209,22237253-22237340,
22237859-22237865
Length = 513
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = -1
Query: 66 GEEGPEIQRRLAKWKDL 16
GE+G E++RR A+WK+L
Sbjct: 441 GEKGKEMRRRAAEWKEL 457
>06_02_0111 -
11958372-11958713,11959367-11959633,11959729-11960124,
11961246-11961320
Length = 359
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 5 VAGTRSFHFANLLCISGPSSPTRTMSSANSIHQGASSC 118
V+ +S A+L C SGP++ T S+ ++IH+ C
Sbjct: 46 VSVPKSMAIADLGCSSGPNALTLISSTVDAIHRYCMEC 83
>04_04_0466 +
25433678-25434007,25434118-25434176,25434345-25434426,
25435024-25435122,25435750-25435831,25436759-25436823,
25437241-25438308,25438369-25438446,25438550-25438596,
25438734-25438779,25438871-25438950,25439050-25439166,
25439842-25439923,25440156-25440281,25440415-25440489,
25440743-25440868,25441542-25441646
Length = 888
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
Frame = -1
Query: 348 KAYDRVPREVLWWSMK------VKGVPGKYQRLVRAMYG-RASTYVRSAAGDSDEFSVT 193
K+YD + RE WW + VK G R V AS +V+SA G F+ T
Sbjct: 243 KSYDDIEREKQWWRIPFVSDFLVKSSLGSALRTVLGSESINASQFVQSAFGQLSSFTYT 301
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,222,753
Number of Sequences: 37544
Number of extensions: 459103
Number of successful extensions: 1336
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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