Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0040
(714 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 89 2e-19
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 77 6e-16
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 76 1e-15
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 67 6e-13
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 65 2e-12
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 65 2e-12
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 62 1e-11
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 62 2e-11
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 62 2e-11
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 58 2e-10
AJ970247-1|CAI96719.1| 132|Anopheles gambiae putative reverse t... 57 5e-10
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 57 6e-10
AJ970248-1|CAI96720.1| 132|Anopheles gambiae putative reverse t... 56 1e-09
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 54 4e-09
AJ970246-1|CAI96718.1| 132|Anopheles gambiae putative reverse t... 53 8e-09
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 52 2e-08
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 51 3e-08
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 51 4e-08
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 49 1e-07
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 49 1e-07
AJ970251-1|CAI96723.1| 131|Anopheles gambiae putative reverse t... 49 2e-07
AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse t... 48 4e-07
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 46 1e-06
AJ970250-1|CAI96722.1| 132|Anopheles gambiae putative reverse t... 41 3e-05
AY750997-1|AAV31069.1| 153|Anopheles gambiae peritrophin-1 prot... 28 0.33
AY344828-1|AAR02439.1| 153|Anopheles gambiae peritrophin A prot... 28 0.33
AY344827-1|AAR02438.1| 153|Anopheles gambiae peritrophin A prot... 28 0.33
AY344826-1|AAR02437.1| 153|Anopheles gambiae peritrophin A prot... 28 0.33
AY344825-1|AAR02436.1| 153|Anopheles gambiae peritrophin A prot... 28 0.33
AY344824-1|AAR02435.1| 153|Anopheles gambiae peritrophin A prot... 28 0.33
AY344823-1|AAR02434.1| 153|Anopheles gambiae peritrophin A prot... 28 0.33
AF030431-1|AAC39127.1| 153|Anopheles gambiae peritrophin 1 prot... 28 0.33
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 26 1.4
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 26 1.4
AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform ... 25 3.1
AY545988-1|AAS99341.1| 423|Anopheles gambiae carboxypeptidase B... 24 5.4
AJ627286-1|CAF28572.1| 423|Anopheles gambiae carboxypeptidase B... 24 5.4
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 88.6 bits (210), Expect = 2e-19
Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 2/200 (1%)
Frame = -1
Query: 672 LTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRM 493
L FN P W KS +VP++K KGD NYRGI + K +E VI + +
Sbjct: 580 LAKLFNASLANGYFPKAWRKSWMVPIYK-KGDRTDAINYRGITSLCAIAKVFELVIYKNL 638
Query: 492 RD--ESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVPREV 319
S +S Q GF+P +STT + C A V ++ DL+ A+D +P +
Sbjct: 639 LHACRSYLSPYQHGFVPKKSTTTNLVEFVTYCTSQIDAGAQVDAIYTDLKAAFDSLPHAI 698
Query: 318 LWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFILIM 139
L + G+P + +++ + V+ S E + G+ QGS + P LFIL +
Sbjct: 699 LLAKLDKLGIPSPLVQWLKSYLIHRTYIVKIDKHMSKEIVSSSGVPQGSNIGPLLFILFI 758
Query: 138 DALTSDIQEEAPWCMLFADD 79
+ +T + ++ LFADD
Sbjct: 759 NDVTLALPPDS--ISLFADD 776
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 77.0 bits (181), Expect = 6e-16
Identities = 58/201 (28%), Positives = 88/201 (43%), Gaps = 2/201 (0%)
Frame = -1
Query: 672 LTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRM 493
L FN P W L PV K KG + NYRGI + K +E I +
Sbjct: 509 LAKIFNLSLSLGVFPALWKSCWLFPVHK-KGCRSIVSNYRGITQTCATAKTFELCIFPTI 567
Query: 492 RDE--SEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVPREV 319
S +S Q GFMPGRST+ + S + A + ++ D A+D +P +
Sbjct: 568 LHSCSSAISPKQHGFMPGRSTSTNLMSFVTNIFRSFEAGTQLDAIYTDFHAAFDSLPHSL 627
Query: 318 LWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFILIM 139
L + G + + S V++ + S+EF T G+ QG LSP LF L +
Sbjct: 628 LLAKLSKLGFGDGIISWLSSYLSNRSCRVKTGSYLSEEFFCTSGVPQGCVLSPLLFSLFI 687
Query: 138 DALTSDIQEEAPWCMLFADDI 76
+ + + + + +L+ADDI
Sbjct: 688 NDVCNVLPPDGH--LLYADDI 706
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 75.8 bits (178), Expect = 1e-15
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 17/218 (7%)
Frame = -1
Query: 669 TLFFNKLFQE----EAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIA 502
T F KLFQE E PDEW K L + K + ++R I L+++ K +E+++
Sbjct: 455 TDIFKKLFQECLDNERFPDEWKKQKLALIPKPGKPPGLASSFRPILLLNNPGKVYERLLL 514
Query: 501 RRMRDESE------VSQNQFGFMPGRSTTDAI-------FSLRQLCEKYRRASKNVHMVF 361
R+ D E +++NQ+GF GRST AI R + + +V
Sbjct: 515 SRINDVIEDPESPRLAENQYGFRRGRSTVQAIQLVVDAGSHAMSFGRTNNRDKRCLLVVA 574
Query: 360 VDLEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLH 181
+D+ A++ + + +++ KGVP + + ++R + +A G VT G+
Sbjct: 575 LDVRNAFNTASWQCIATALEDKGVPRQLRNILRDYFANRELVYDTADGPVTR-RVTAGVP 633
Query: 180 QGSALSPYLFILIMDALTSDIQEEAPWCMLFADDIVLV 67
QGS L P L+ ++ D + E + +ADDIV++
Sbjct: 634 QGSILGPTLWNIMYDGVLRVELPEGASVIGYADDIVVM 671
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 66.9 bits (156), Expect = 6e-13
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 9/207 (4%)
Frame = -1
Query: 660 FNKLFQEEAMPDEWCKSSLVPVFKSKGDIQ-VCDNYRGIKLMSHSMKAWEKVIARRMRDE 484
+ + PD W K LV G + R I L+ K E+VI R+ +
Sbjct: 444 YQRCLDTGVFPDNWKKQRLVLSIPKPGKRPGESGSSRPICLIDGVAKGLERVILHRLNNH 503
Query: 483 SE----VSQNQFGFMPGRSTTDAIFSLRQLCE----KYRRASKNVHMVFVDLEKAYDRVP 328
E +S+NQ+GF GR+TTDAI + + + R A++ +V +D++ A++
Sbjct: 504 IERVQGLSENQYGFRKGRATTDAIEKVLSIASASRARNRGANRFCAVVTLDVKNAFNSAS 563
Query: 327 REVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFI 148
+ S++ +P KY + Y R + + E VT G+ QGS L P L+
Sbjct: 564 WTAIARSLQRINIP-KYLYDIIGNYFRNRVLLYETNEGNRERVVTAGVPQGSVLGPTLWN 622
Query: 147 LIMDALTSDIQEEAPWCMLFADDIVLV 67
L+ + + + + FADDIVLV
Sbjct: 623 LMYNEVLGLTLYDGASLIGFADDIVLV 649
Score = 23.4 bits (48), Expect = 7.2
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = +2
Query: 398 FSHNWRREKMASVVLRPGMNP 460
F NW+++++ + +PG P
Sbjct: 453 FPDNWKKQRLVLSIPKPGKRP 473
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 65.3 bits (152), Expect = 2e-12
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 13/211 (6%)
Frame = -1
Query: 660 FNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMRDES 481
+ + P W + LV + K +YR + ++ K EK+I R+ +
Sbjct: 523 YQSCLETATFPAPWKRQRLVLLPKPGKPPGSNGSYRPLCMLDALGKVLEKLILNRLHNHL 582
Query: 480 E------VSQNQFGFMPGRSTTDAIFSL---RQLCEKYRRAS----KNVHMVFVDLEKAY 340
E +S Q GF GRST AI ++ Q ++RR + + + +V +D++ A+
Sbjct: 583 EDPAAVRLSDRQHGFRRGRSTIGAIRTVIEAGQSAMRFRRTNGRDNRFLLVVSMDVKNAF 642
Query: 339 DRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSP 160
+ + + ++++KGVP QR+VR+ + ++ G S+T G+ QGS L P
Sbjct: 643 NTASWQAIATALQMKGVPAGLQRIVRSYFENRELVFETSDGPVTR-SITAGVPQGSILGP 701
Query: 159 YLFILIMDALTSDIQEEAPWCMLFADDIVLV 67
L+ + D + + + +ADD+VL+
Sbjct: 702 TLWNTMYDGVLDVALPQDCEMVAYADDLVLL 732
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 65.3 bits (152), Expect = 2e-12
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Frame = -1
Query: 660 FNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMRDES 481
+ +L + PD W + LV + KS +YR I L+S K E++I RR+
Sbjct: 456 YKQLLEAGTFPDAWKRQQLVLLTKSGKPPGEPSSYRPICLLSVLGKILERLIQRRLTTHL 515
Query: 480 E----VSQNQFGFMPGRSTTDAIFSL----RQLCEKYRRASKNVHMVFVDLEKAYDRVPR 325
E +S Q+GF GRST DAI + + +K R+ + +V VD+ A +
Sbjct: 516 ESTGGLSDPQYGFRKGRSTVDAITRVMNNGKVALDKKRKGDRLCAVVTVDVRNALNSANW 575
Query: 324 EVLWWSMKVKGVPGKYQRLVRAMY-GRASTYVRSAAGDSDE----FSVTVGLHQGSALSP 160
+ +++ + P +Q L+R + GR Y D+DE +V+ G+ QGS L P
Sbjct: 576 TAIGQALQRENTPPYFQALLRNYFVGRTLHY------DTDEKVVSRTVSAGVPQGSVLGP 629
Query: 159 YLF-ILIMDALTSDIQEEAPWCMLFADDI 76
L+ ++ D L ++ + FADD+
Sbjct: 630 TLWNVMYDDLLRLPLEGLRADIIGFADDV 658
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 62.5 bits (145), Expect = 1e-11
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 8/198 (4%)
Frame = -1
Query: 630 PDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMRDESE----VSQNQ 463
PDEW + LV + K + R I L+ + K E++I +R+ E +S +Q
Sbjct: 450 PDEWKRQRLVLIPKPNKPPGEPGSVRPICLLDGAGKGLERIIVQRLNAHIEEVNGLSDDQ 509
Query: 462 FGFMPGRSTTDAIFSLRQLCE----KYRRASKNVHMVFVDLEKAYDRVPREVLWWSMKVK 295
FGF RST DAI + + + R + + +V +D+ A++ + +++
Sbjct: 510 FGFRSRRSTVDAIQRVVDIVSVARSRNRYSGRYCAVVTLDVTNAFNSASWLAIANALQRI 569
Query: 294 GVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFILIMDALTSDIQ 115
P KY + Y R + E +VT G+ QGS L P L+ L+ D +
Sbjct: 570 NTP-KYLYDIIGDYFRNRVLMYDTTDGPAEIAVTSGVPQGSVLGPTLWNLMYDGVLRVAM 628
Query: 114 EEAPWCMLFADDIVLVGE 61
E + +ADDIVL+ E
Sbjct: 629 VEGARIIGYADDIVLLVE 646
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 62.1 bits (144), Expect = 2e-11
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 17/215 (7%)
Frame = -1
Query: 660 FNKLFQE----EAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRM 493
F ++FQE P W K LV + K ++R I L+ ++ KA E+++ R+
Sbjct: 461 FRRVFQECLDMSCFPQPWKKQRLVLLPKPGKSPGEPSSFRPICLLDNTGKALERLLLNRL 520
Query: 492 RD-----ES-EVSQNQFGFMPGRSTTDAIFSL-------RQLCEKYRRASKNVHMVFVDL 352
+ ES ++S+ QFGF GRST AI + L R + + +V +D+
Sbjct: 521 NEYIEDPESPQLSEQQFGFRRGRSTLQAIQQVVDAGRRALSLGRTNNRDRRCLMVVALDV 580
Query: 351 EKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGS 172
A++ + + +++ KGVP + R+++ + +A G V+ G+ QGS
Sbjct: 581 RNAFNTASWQSIAEALQAKGVPVQLCRILQDYFADRELEYDTADGPVTR-RVSAGVTQGS 639
Query: 171 ALSPYLFILIMDALTSDIQEEAPWCMLFADDIVLV 67
L P L+ ++ D + + E + FADD+ ++
Sbjct: 640 ILGPTLWNIMYDGVLAVELPEGASIVGFADDLAIL 674
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 62.1 bits (144), Expect = 2e-11
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 10/216 (4%)
Frame = -1
Query: 660 FNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRM---- 493
F F P W + LV + K R + L+ + K E +I R+
Sbjct: 436 FQNCFDTGFFPIPWKRQKLVLLPKPGKPPDDASALRPLALIDNFAKILEILILNRLVVYT 495
Query: 492 RDESEVSQNQFGFMPGRSTTDAIFSL----RQLCEKYRRASKNVHMVFVDLEKAYDRVPR 325
E +S QFGF GRST +AI ++ R K R ++ +V +D++ A++
Sbjct: 496 EGEHGLSDRQFGFRKGRSTGEAIAAVLKKRRSALLKKRTGNRYCAIVTIDVKNAFNSANW 555
Query: 324 EVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFIL 145
E + ++ +P RL+R+ Y ++ A + S+T G+ QGS L P L+ +
Sbjct: 556 EAIHAALSKMMIPPYLCRLLRS-YLDHRVFLYDTALGIKKMSLTAGVPQGSILGPTLWNV 614
Query: 144 IMDALTSDIQEEAPWCMLFADDIVL--VGEEGPEIQ 43
+ + + + P + FADDI L +GE EI+
Sbjct: 615 MYNGVLTLGLPPGPEVIGFADDIALTVLGESIEEIE 650
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 58.4 bits (135), Expect = 2e-10
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Frame = -1
Query: 636 AMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMRDESE------V 475
+ P +W + LV + K +YR + ++ K E++I R+ + E +
Sbjct: 524 SFPAQWKRQRLVLLPKQGKPPGESSSYRPLCMLDALGKVLERLILNRLNEHLEEPSSPRL 583
Query: 474 SQNQFGFMPGRSTTDAI---FSLRQLCEKYRRA----SKNVHMVFVDLEKAYDRVPREVL 316
S QFGF GRST AI + +RR ++ + +V +D++ A++ + +
Sbjct: 584 SDRQFGFRRGRSTVSAIQRVVEAGRTAMSFRRTNGRDNRFLLVVALDVKNAFNTANWQSI 643
Query: 315 WWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFILIMD 136
++ KGVP QR++R+ + Y ++ G VT G+ QGS L P L+ ++ D
Sbjct: 644 ASRLQAKGVPVGLQRMLRSYFEDRVLYFDTSEGPVVR-HVTAGVPQGSILGPTLWNIMYD 702
Query: 135 ALTSDIQEEAPWCMLFADDIVLV 67
+ + +ADD+ L+
Sbjct: 703 GVLDVPLPPDVEVIGYADDLALL 725
>AJ970247-1|CAI96719.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 57.2 bits (132), Expect = 5e-10
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 3/133 (2%)
Frame = -1
Query: 561 NYRGIKLMSHSMKAWEKVIARRMRDESE--VSQNQFGFMPGRSTTDAIFSLRQLCEKYRR 388
NYRGI ++ K E ++ + + +S NQ GF+P RSTT + C K
Sbjct: 1 NYRGITPLAAIAKVLELLVYEPLLASARNYISPNQHGFVPNRSTTTNLMQFVSSCHKSID 60
Query: 387 ASKNVHMVFVDLEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTY-VRSAAGDS 211
A V +++ DL+ A+DR+ +L + G+P +R+ Y TY VR S
Sbjct: 61 ARLQVDVIYTDLKAAFDRISHVILLAKLDRLGLPDPLVAWLRS-YLMGRTYSVRMGPHLS 119
Query: 210 DEFSVTVGLHQGS 172
+ G+ QGS
Sbjct: 120 RSLRASSGVPQGS 132
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 56.8 bits (131), Expect = 6e-10
Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 11/199 (5%)
Frame = -1
Query: 630 PDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMR---DESEVSQNQF 460
P +W + LV + K +YR + ++ K E++I R D ++S Q+
Sbjct: 488 PQQWKRQRLVLLPKPGKAPGESSSYRPLCMLDALGKVLERLILNRHLEDPDSPQLSDAQY 547
Query: 459 GFMPGRSTTDAIFSL-------RQLCEKYRRASKNVHMVFVDLEKAYDRVPREVLWWSMK 301
GF GRST AI SL R + R + + +V +D+ A++ + + +++
Sbjct: 548 GFRRGRSTISAIQSLVDAGKASRSFGQTNNRDKRCLMVVALDVRNAFNTASWQSIANALR 607
Query: 300 VKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFILIMD-ALTS 124
KGVP R++++ + ++ G V+ G+ QGS L P L+ ++ D L
Sbjct: 608 EKGVPSGLLRILQSYFTDRELIFNTSEGPVVR-CVSAGVPQGSILGPTLWNVMYDGVLRI 666
Query: 123 DIQEEAPWCMLFADDIVLV 67
+ +EA + +ADD+V++
Sbjct: 667 PLPDEAK-VIGYADDLVVL 684
>AJ970248-1|CAI96720.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 56.0 bits (129), Expect = 1e-09
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 3/133 (2%)
Frame = -1
Query: 561 NYRGIKLMSHSMKAWEKVIARRMRDESE--VSQNQFGFMPGRSTTDAIFSLRQLCEKYRR 388
NYRGI + K E ++ + + +S NQ GF+P RSTT + C K
Sbjct: 1 NYRGITSLGAIAKVLELLVYEPLLASARNYISPNQHGFVPNRSTTTNLMQFVSSCHKSID 60
Query: 387 ASKNVHMVFVDLEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTY-VRSAAGDS 211
A V +++ DL+ A+DR+ +L + G+P +R+ Y TY VR S
Sbjct: 61 ARLQVDVIYTDLKAAFDRISHVILLAKLDRLGLPDPLVAWLRS-YLMGRTYSVRMGPHLS 119
Query: 210 DEFSVTVGLHQGS 172
+ G+ QGS
Sbjct: 120 RFLRASSGVPQGS 132
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 54.0 bits (124), Expect = 4e-09
Identities = 47/201 (23%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Frame = -1
Query: 630 PDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMR------DESEVSQ 469
P EW + LV + K+ +YR + ++ K E++I R+ D +S
Sbjct: 480 PSEWKRQRLVLLSKTGKPPGESSSYRPLSMLDALGKVLEQLILNRLNKHLEDPDSPRLSD 539
Query: 468 NQFGFMPGRSTTDAI---FSLRQLCEKYRRAS----KNVHMVFVDLEKAYDRVPREVLWW 310
Q+GF GRST AI + + +RR + + + +V +D+ A++ + +
Sbjct: 540 AQYGFRRGRSTFSAIQRVVDAGRRAKSFRRTNHRDKRCLMVVALDICNAFNTASWQSIAD 599
Query: 309 SMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFILIMDAL 130
+++ KGVP ++ + + ++AG E ++ G+ Q S L P L+ ++ D +
Sbjct: 600 ALRNKGVPSALLNIIGSYFEERKLIYNTSAGPV-ERHISAGVPQESILGPTLWNVMYDGV 658
Query: 129 TSDIQEEAPWCMLFADDIVLV 67
+ +ADD+VL+
Sbjct: 659 LGVELPPGAELIGYADDLVLL 679
>AJ970246-1|CAI96718.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 53.2 bits (122), Expect = 8e-09
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Frame = -1
Query: 561 NYRGIKLMSHSMKAWEKVIARRMRDESE--VSQNQFGFMPGRSTTDAIFSLRQLCEKYRR 388
NYRGI ++ K E ++ + + +S NQ GF+P RSTT + C K
Sbjct: 1 NYRGITPLAAIAKVLELLVYEPLLASARNYISPNQHGFVPNRSTTTNLMQFVSSCHKSID 60
Query: 387 ASKNVHMVFVDLEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTY 235
A V +++ DL+ A+DR+ +L + G+P +R+ Y TY
Sbjct: 61 ARLQVDVIYTDLKAAFDRISHVILLAKLDRLGLPDPLVAWLRS-YLMGRTY 110
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 52.0 bits (119), Expect = 2e-08
Identities = 48/214 (22%), Positives = 91/214 (42%), Gaps = 13/214 (6%)
Frame = -1
Query: 669 TLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMR 490
T + P W + LV + K V +YR + ++ K E++I R+
Sbjct: 453 TALYQDCLVNGTFPAAWKRQRLVLIPKPGKPSGVSCSYRPLCMLDALGKVLERLILNRLH 512
Query: 489 DESE------VSQNQFGFMPGRSTTDAIFSLRQLCEKY-------RRASKNVHMVFVDLE 349
+ E +S Q+GF G ST I + + ++ RR + + + +D+
Sbjct: 513 EFLEDPESPRLSDRQYGFRRGCSTIGLIQRVVEAGQRAMSFGRANRRDKRFLLVAALDVR 572
Query: 348 KAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSA 169
A++ + + +++ K VP QR++ + + ++ G SVT G+ QGS
Sbjct: 573 NAFNTASWQAIATALRTKRVPAGLQRIIHSYFQDRELVYETSEGPVVR-SVTAGVPQGSI 631
Query: 168 LSPYLFILIMDALTSDIQEEAPWCMLFADDIVLV 67
L P L+ + D + + +ADD+VL+
Sbjct: 632 LGPTLWNTMYDGVLDIALPPDAEILGYADDLVLL 665
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 51.2 bits (117), Expect = 3e-08
Identities = 46/207 (22%), Positives = 93/207 (44%), Gaps = 13/207 (6%)
Frame = -1
Query: 648 FQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMRD------ 487
F P W LV + K ++R + +++ K E++I R+ +
Sbjct: 480 FDRGEFPAHWKIQRLVLLQKPGKPPGESSSFRPLGMLNGLGKVLERLILNRLNEFLENGE 539
Query: 486 ESEVSQNQFGFMPGRSTTDAIFSLRQL---CEKYRRAS----KNVHMVFVDLEKAYDRVP 328
S +S NQ+GF G+ST I + Q + + R + + + +V +D+ A++
Sbjct: 540 TSHLSPNQYGFRRGKSTVQGILRVVQAGRTAKSFNRTNGRDMRCLMVVSLDVRNAFNTAS 599
Query: 327 REVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFI 148
+ + +++ K VP Q+L++ + G +++ G+ QGS L P L+
Sbjct: 600 WKSIAMALRSKEVPASLQKLLQHWMTDRQLVFDTDDGPVTR-NLSTGVPQGSILGPTLWN 658
Query: 147 LIMDALTSDIQEEAPWCMLFADDIVLV 67
++ D++ E + FADD++L+
Sbjct: 659 VMYDSVLDVQLPEGAEIIAFADDLLLL 685
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 50.8 bits (116), Expect = 4e-08
Identities = 46/201 (22%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Frame = -1
Query: 630 PDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRM------RDESEVSQ 469
P +W + LV + K +YR + ++ K E++I R+ +D ++S
Sbjct: 541 PPQWKRQRLVLLPKPGKPPGESSSYRPLCMLDALGKVLERLILNRLNRHIEQQDSPQLSD 600
Query: 468 NQFGFMPGRSTTDAI---FSLRQLCEKYRRAS----KNVHMVFVDLEKAYDRVPREVLWW 310
Q+GF GRST AI + +RR + + + +V +D+ A++ + +
Sbjct: 601 AQYGFRRGRSTISAIQRVVDAGTAAKLFRRTNTRDKRCLMVVALDIRNAFNTANWQAIAD 660
Query: 309 SMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFILIMDAL 130
+++ K VP +++ A + ++ G E ++ G+ QGS L P L+ ++ D +
Sbjct: 661 ALQSKNVPSYLMKIIGAYFEGRKLLFDTSEGPV-ERHISAGVPQGSILGPTLWNMMYDGV 719
Query: 129 TSDIQEEAPWCMLFADDIVLV 67
+ +ADD+VL+
Sbjct: 720 FGVGLPLGAEIIGYADDLVLL 740
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 49.2 bits (112), Expect = 1e-07
Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 9/159 (5%)
Frame = -1
Query: 558 YRGIKLMSHSMKAWEKVIARRMRDESEVSQNQFGFMPGRSTT-----DAIFSLRQLCEKY 394
YR + +S+ K VI ++++D + + GR D + + +
Sbjct: 534 YRPLTCLSNLNKVLSSVITQKVKDHCDTNNVMTEEQTGRRKNTQGCKDQVIIDAVIVGQA 593
Query: 393 RRASKNVHMVFVDLEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGD 214
+ +N+ M ++D +KAYD VP L +++ V G +L++ G ST + G
Sbjct: 594 AKKQRNLDMAYIDYKKAYDSVPHSYLLKVLQLYKVDGNVIKLMQHAMGMWSTSLHVTDGK 653
Query: 213 ----SDEFSVTVGLHQGSALSPYLFILIMDALTSDIQEE 109
S ++ G+ QG S F L M+ L+ + ++
Sbjct: 654 VVLRSRSLNIRRGIFQGDTFSTLWFCLAMNPLSRTLNQQ 692
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 49.2 bits (112), Expect = 1e-07
Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 21/219 (9%)
Frame = -1
Query: 660 FNKLFQE----EAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRM 493
F +++QE P++W K LV + K ++R I L++++ K +E+++ R+
Sbjct: 456 FRQVYQECLDRSCFPEQWKKQRLVLLPKPGKPPGDPSSFRPICLLNNAGKTFERLLLDRL 515
Query: 492 RDESEVSQN------QFGFMPGRSTTDAIFSLRQLCEKYRRA----------SKNVHMVF 361
+ E S N Q+GF GRST + +++Q+ RRA + + +V
Sbjct: 516 NEHLEDSDNPQLSEYQYGFRLGRST---LLAIQQVVNAARRAMSFGRTNNRDRRCLMVVA 572
Query: 360 VDLEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMY-GRASTYVRSAAGDSDEFSVTVGL 184
+D+ A++ + + +++ KGVP + +++ + R TY V+ G
Sbjct: 573 LDVRNAFNTASWQCIAEALRDKGVPLQLCNILQDYFTDRELTY--DTTDGPVTRRVSAGC 630
Query: 183 HQGSALSPYLFILIMDALTSDIQEEAPWCMLFADDIVLV 67
QGS L P L+ + D + E + F DD+ +V
Sbjct: 631 PQGSMLGPRLWNVGYDGVLRLELPEGAQAVGFVDDLAIV 669
>AJ970251-1|CAI96723.1| 131|Anopheles gambiae putative reverse
transcriptase protein.
Length = 131
Score = 48.8 bits (111), Expect = 2e-07
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 2/130 (1%)
Frame = -1
Query: 561 NYRGIKLMSHSMKAWEKVIARRMRD--ESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRR 388
NYRGI +S K +E V+ + + S +S Q GF P RS T + C
Sbjct: 1 NYRGITTLSAGAKVFEVVVQNSLLNCCRSLISTRQHGFFPRRSVTTNLVEFVSHCHAAFA 60
Query: 387 ASKNVHMVFVDLEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSD 208
+ + +++ DL+ A+DRV +L + G + + V+ S
Sbjct: 61 SGAQMDVIYTDLKAAFDRVNHRLLLAKLARLGFSASLVEWLESYLTNRRYRVKVDCMTSR 120
Query: 207 EFSVTVGLHQ 178
EF G+H+
Sbjct: 121 EFVSCSGVHK 130
>AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse
transcriptase protein.
Length = 134
Score = 47.6 bits (108), Expect = 4e-07
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 4/134 (2%)
Frame = -1
Query: 561 NYRGIKLMSHSMKAWEKVIARRMR----DESEVSQNQFGFMPGRSTTDAIFSLRQLCEKY 394
+YR I L+S K +EK++ RM + + + ++QFGF P STT + +
Sbjct: 1 SYRPISLLSCLGKIFEKLLESRMALHTFNNNIIPKSQFGFRPSLSTTHQLHRVTNNIVHN 60
Query: 393 RRASKNVHMVFVDLEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGD 214
R K+ + +D EKA+D + + L + P +V + V
Sbjct: 61 RCNRKSTGLALLDTEKAFDSIWHQGLLSKLIKLNFPSYLINIVNSFISNRQNKVHILNST 120
Query: 213 SDEFSVTVGLHQGS 172
S ++ G+ QGS
Sbjct: 121 SSTYTPKAGVPQGS 134
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 46.0 bits (104), Expect = 1e-06
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 9/172 (5%)
Frame = -1
Query: 558 YRGIKLMSHSMKAWEKVIARRMRDESE----VSQNQFGFMPGRSTTDAIFSLRQ----LC 403
+R + L+ + K E VI R+ +E +S QFGF RST DAI ++ +
Sbjct: 531 FRPLGLVDNLAKVQEMVILDRLTKYTEGPHGLSDRQFGFRKKRSTVDAILAVLEKGIAAF 590
Query: 402 EKYRRASKNVHMVFVDLEKAYDRVPREVLWWSMKVKGVPGKYQRLVR-AMYGRASTYVRS 226
++ R ++ ++ +D++ A++ E + +++ +P RL R + GR Y +
Sbjct: 591 QRKRCGARYCALITIDVKNAFNSASWEEIAAAVERMKIPPHLCRLSRNYLDGRVLQY-DT 649
Query: 225 AAGDSDEFSVTVGLHQGSALSPYLFILIMDALTSDIQEEAPWCMLFADDIVL 70
A G ++ G+ QGS L L+ +I D + + FADDI +
Sbjct: 650 AEGVKTN-AIPAGVPQGSVLGLTLWNVIYDGVLTLALPHGVEITGFADDIAI 700
>AJ970250-1|CAI96722.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 41.1 bits (92), Expect = 3e-05
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = -1
Query: 561 NYRGIKLMSHSMKAWEKVIARRM--RDESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRR 388
NYRGI K +E VI + S +S Q GF+P +STT +
Sbjct: 1 NYRGITSSCAIAKVFELVIYNNLLYACRSYLSPYQHGFVPKKSTTTNLVEFVTYYTSQID 60
Query: 387 ASKNVHMVFVDLEKAYDRVPREVL 316
A V ++ DL+ A+D +P +L
Sbjct: 61 AGAQVDAIYTDLKSAFDSLPHAIL 84
>AY750997-1|AAV31069.1| 153|Anopheles gambiae peritrophin-1
protein.
Length = 153
Score = 27.9 bits (59), Expect = 0.33
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Frame = +3
Query: 321 PHGEPYHTLFLNQQTPCAHFYL---HG-DIFRTIGAGKKWRPL--YC 443
P +P H +++ +T C +Y+ +G ++ +T +G W P+ YC
Sbjct: 97 PEYDPDHMVYIPHETDCGKYYICDPYGVELEQTCPSGLHWNPVVNYC 143
>AY344828-1|AAR02439.1| 153|Anopheles gambiae peritrophin A
protein.
Length = 153
Score = 27.9 bits (59), Expect = 0.33
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Frame = +3
Query: 321 PHGEPYHTLFLNQQTPCAHFYL---HG-DIFRTIGAGKKWRPL--YC 443
P +P H +++ +T C +Y+ +G ++ +T +G W P+ YC
Sbjct: 97 PEYDPDHMVYIPHETDCGKYYICDPYGVELEQTCPSGLHWNPVVNYC 143
>AY344827-1|AAR02438.1| 153|Anopheles gambiae peritrophin A
protein.
Length = 153
Score = 27.9 bits (59), Expect = 0.33
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Frame = +3
Query: 321 PHGEPYHTLFLNQQTPCAHFYL---HG-DIFRTIGAGKKWRPL--YC 443
P +P H +++ +T C +Y+ +G ++ +T +G W P+ YC
Sbjct: 97 PEYDPDHMVYIPHETDCGKYYICDPYGVELEQTCPSGLHWNPVVNYC 143
>AY344826-1|AAR02437.1| 153|Anopheles gambiae peritrophin A
protein.
Length = 153
Score = 27.9 bits (59), Expect = 0.33
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Frame = +3
Query: 321 PHGEPYHTLFLNQQTPCAHFYL---HG-DIFRTIGAGKKWRPL--YC 443
P +P H +++ +T C +Y+ +G ++ +T +G W P+ YC
Sbjct: 97 PEYDPDHMVYIPHETDCGKYYICDPYGVELEQTCPSGLHWNPVVNYC 143
>AY344825-1|AAR02436.1| 153|Anopheles gambiae peritrophin A
protein.
Length = 153
Score = 27.9 bits (59), Expect = 0.33
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Frame = +3
Query: 321 PHGEPYHTLFLNQQTPCAHFYL---HG-DIFRTIGAGKKWRPL--YC 443
P +P H +++ +T C +Y+ +G ++ +T +G W P+ YC
Sbjct: 97 PEYDPDHMVYIPHETDCGKYYICDPYGVELEQTCPSGLHWNPVVNYC 143
>AY344824-1|AAR02435.1| 153|Anopheles gambiae peritrophin A
protein.
Length = 153
Score = 27.9 bits (59), Expect = 0.33
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Frame = +3
Query: 321 PHGEPYHTLFLNQQTPCAHFYL---HG-DIFRTIGAGKKWRPL--YC 443
P +P H +++ +T C +Y+ +G ++ +T +G W P+ YC
Sbjct: 97 PEYDPDHMVYIPHETDCGKYYICDPYGVELEQTCPSGLHWNPVVNYC 143
>AY344823-1|AAR02434.1| 153|Anopheles gambiae peritrophin A
protein.
Length = 153
Score = 27.9 bits (59), Expect = 0.33
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Frame = +3
Query: 321 PHGEPYHTLFLNQQTPCAHFYL---HG-DIFRTIGAGKKWRPL--YC 443
P +P H +++ +T C +Y+ +G ++ +T +G W P+ YC
Sbjct: 97 PEYDPDHMVYIPHETDCGKYYICDPYGVELEQTCPSGLHWNPVVNYC 143
>AF030431-1|AAC39127.1| 153|Anopheles gambiae peritrophin 1
protein.
Length = 153
Score = 27.9 bits (59), Expect = 0.33
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Frame = +3
Query: 321 PHGEPYHTLFLNQQTPCAHFYL---HG-DIFRTIGAGKKWRPL--YC 443
P +P H +++ +T C +Y+ +G ++ +T +G W P+ YC
Sbjct: 97 PEYDPDHMVYIPHETDCGKYYICDPYGVELEQTCPSGLHWNPVVNYC 143
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 25.8 bits (54), Expect = 1.4
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 241 TSSTVHSSNKPLVFPWHSFHFHAPPQNL 324
T+ S K + WH FH H P ++L
Sbjct: 525 TAWRCRSCGKEVTNRWHHFHSHTPQRSL 552
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 25.8 bits (54), Expect = 1.4
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 241 TSSTVHSSNKPLVFPWHSFHFHAPPQNL 324
T+ S K + WH FH H P ++L
Sbjct: 501 TAWRCRSCGKEVTNRWHHFHSHTPQRSL 528
>AY943929-1|AAX49502.1| 755|Anopheles gambiae laccase-2 isoform B
protein.
Length = 755
Score = 24.6 bits (51), Expect = 3.1
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +3
Query: 357 QQTPCAH-FYLHGDIFRTIGAGK 422
QQ +H F+LHG F IG G+
Sbjct: 631 QQENLSHPFHLHGHAFHVIGMGR 653
>AY545988-1|AAS99341.1| 423|Anopheles gambiae carboxypeptidase B
precursor protein.
Length = 423
Score = 23.8 bits (49), Expect = 5.4
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 229 AYVRTSSTVHSSNKPLVFPWHSFHFHAPPQN 321
A +R VH+ + +++PW HAP ++
Sbjct: 299 AAIRMYLAVHTYGEMILWPWGYDFLHAPNED 329
>AJ627286-1|CAF28572.1| 423|Anopheles gambiae carboxypeptidase B
protein.
Length = 423
Score = 23.8 bits (49), Expect = 5.4
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 229 AYVRTSSTVHSSNKPLVFPWHSFHFHAPPQN 321
A +R VH+ + +++PW HAP ++
Sbjct: 299 AAIRMYLAVHTYGEMILWPWGYDFLHAPNED 329
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 809,375
Number of Sequences: 2352
Number of extensions: 16976
Number of successful extensions: 140
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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