Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0040
(714 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 80 3e-15
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 76 6e-14
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 68 1e-11
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 68 1e-11
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 66 4e-11
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 66 4e-11
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 65 8e-11
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 64 1e-10
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 63 3e-10
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 63 4e-10
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 62 7e-10
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 61 1e-09
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 61 1e-09
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 61 1e-09
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 61 1e-09
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 61 1e-09
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 61 1e-09
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 58 2e-08
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 57 2e-08
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 56 5e-08
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 56 6e-08
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 52 1e-06
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 52 1e-06
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 52 1e-06
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 52 1e-06
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 80.2 bits (189), Expect = 3e-15
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 5/208 (2%)
Frame = -1
Query: 678 TWLTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIAR 499
T L FN++ P W + ++P+ K ++YR I L+S K EK+IA+
Sbjct: 473 TKLLDIFNQILTTGKYPHTWRSAIIIPISKPNKPPSDINSYRPISLLSCLGKTLEKIIAQ 532
Query: 498 RM----RDESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRV 331
R+ + + +S NQ F ST DA+ ++ +V ++ D E+A+DRV
Sbjct: 533 RLTWFIKRHNLISHNQVAFKSNHSTMDALLRIQHFASNALSTKNHVSILATDFERAFDRV 592
Query: 330 PREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLF 151
+ ++ G+ + L++A S VR S+ + G+ QGS LS LF
Sbjct: 593 GIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQGSPLSVVLF 652
Query: 150 ILIMDALTSDI-QEEAPWCMLFADDIVL 70
++ ++ + + + + + L+ADD ++
Sbjct: 653 MIAIEDINDIVTRHKDIYISLYADDAII 680
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 75.8 bits (178), Expect = 6e-14
Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 4/188 (2%)
Frame = -1
Query: 702 KFLKADGCTWLTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMK 523
K L +L L +N + + + P +W ++++ + K + ++YR I L+S K
Sbjct: 466 KALPVRAILYLALIYNAILRVQFFPKQWKMAAILMIHKPGKPEESPESYRPISLLSSLSK 525
Query: 522 AWEKVIARRMRD---ESEV-SQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVD 355
WE++IA R+ D E + +QFGF G ST + + L + + + + VF+D
Sbjct: 526 LWERLIANRLNDIMTERRILPDHQFGFRQGHSTVEQVHRLTKHILQAFDDKEYCNAVFID 585
Query: 354 LEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQG 175
+++A+DRV + L +K K P Y ++++ VR S + G+ QG
Sbjct: 586 MQQAFDRVWHDGLISKVK-KLFPAPYYGVLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQG 644
Query: 174 SALSPYLF 151
S L P L+
Sbjct: 645 SVLGPLLY 652
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 68.1 bits (159), Expect = 1e-11
Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 13/219 (5%)
Frame = -1
Query: 660 FNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMRDES 481
F + + P W K LV + K KG V +YR + L+ K +E+++ R+ +
Sbjct: 445 FQQCLLDGVFPKRWKKMKLVLLLKGKGPANVPRSYRPLCLLDIVGKLFERILYARIELIT 504
Query: 480 E----VSQNQFGFMPGRSTTDAIFSLRQLCEK-------YRRASKNVHMVFVDLEKAYDR 334
E + Q+GF G+ST DA+ S+ K + K ++ +D++ A++
Sbjct: 505 ESPTGLQGQQYGFRKGKSTLDALKSVTDAARKALDGNRWLGGSKKYCAIITLDVKNAFNT 564
Query: 333 VPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYL 154
++ +M+ GVP Y R V Y R V+ G+ QGS L P L
Sbjct: 565 ARWPIILGAMRNLGVP-DYIRGVIGNYFRDRVLWYVTEDGPRSHQVSAGVPQGSVLGPIL 623
Query: 153 FILIMDALTSDIQEEAPWCMLFADDIVL--VGEEGPEIQ 43
+ ++ D + S + FADD+ + V + PE+Q
Sbjct: 624 WNIMYDGILSISKPRGVELHCFADDVAITAVAKTIPELQ 662
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 67.7 bits (158), Expect = 1e-11
Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 6/208 (2%)
Frame = -1
Query: 672 LTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRM 493
+T FN++F +P + S ++P+ K D +YR I L K +K+IA+R+
Sbjct: 471 ITKLFNEIFNSH-IPQAYKTSLIIPILKPNTDKTKTSSYRPISLNCCIAKILDKIIAKRL 529
Query: 492 ----RDESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVPR 325
+ ++ QFGF G+ST+D + + L K + + +V +D +A+DRV
Sbjct: 530 WWLVTYNNLINDKQFGFKKGKSTSDCLLYVDYLITK---SKMHTSLVTLDFSRAFDRVGV 586
Query: 324 EVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFIL 145
+ ++ K + ++ VR S + G+ QGS +S LF++
Sbjct: 587 HSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSPLPLFNGIPQGSPISVILFLI 646
Query: 144 IMDALTS--DIQEEAPWCMLFADDIVLV 67
+ L++ + +E + +ADD L+
Sbjct: 647 AFNKLSNIISLHKEIKF-NAYADDFFLI 673
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 66.1 bits (154), Expect = 4e-11
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 6/199 (3%)
Frame = -1
Query: 657 NKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMRDESE 478
N Q P +W + +VP+ K ++YR I L+S K EK+I R+ +
Sbjct: 505 NHCLQAGYFPRDWKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLD 564
Query: 477 VSQN----QFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVPREVLWW 310
+ Q+GF G +T LR ++ ++ ++V +V +D+E A+D V + L
Sbjct: 565 IHNTLPTVQYGFRNGLNTILPTLKLRNYIKESIQSKQSVGLVTLDIEAAFDTVWHDGLLH 624
Query: 309 SMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFILIMDAL 130
+K+ G P ++V+ V + S + G+ QGS L P LF +
Sbjct: 625 KLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLF----NIF 680
Query: 129 TSDIQEEAPWCM--LFADD 79
T DI +A C+ LFADD
Sbjct: 681 THDI-PQATNCVLSLFADD 698
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 66.1 bits (154), Expect = 4e-11
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 6/199 (3%)
Frame = -1
Query: 657 NKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMRDESE 478
N Q P +W + +VP+ K ++YR I L+S K EK+I R+ +
Sbjct: 453 NHCLQAGYFPRDWKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLD 512
Query: 477 VSQN----QFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVPREVLWW 310
+ Q+GF G +T LR ++ ++ ++V +V +D+E A+D V + L
Sbjct: 513 IHNTLPTVQYGFRNGLNTILPTLKLRNYIKESIQSKQSVGLVTLDIEAAFDTVWHDGLLH 572
Query: 309 SMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFILIMDAL 130
+K+ G P ++V+ V + S + G+ QGS L P LF +
Sbjct: 573 KLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLF----NIF 628
Query: 129 TSDIQEEAPWCM--LFADD 79
T DI +A C+ LFADD
Sbjct: 629 THDI-PQATNCVLSLFADD 646
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 65.3 bits (152), Expect = 8e-11
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 5/209 (2%)
Frame = -1
Query: 672 LTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCD--NYRGIKLMSHSMKAWEKVIAR 499
L F++ + P EW +V + K D C+ +YRGI L+ K E ++
Sbjct: 473 LASLFSRCIRLGYFPAEWKCPRVVSLLKGP-DKDKCEPSSYRGICLLPVFGKVLEAIMVN 531
Query: 498 RMRDE-SEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVPRE 322
R+R+ E + QFGF GR DA ++ A++ V FVD + A+D V
Sbjct: 532 RVREVLPEGCRWQFGFRQGRCVEDAWRHVKSSVGA--SAAQYVLGTFVDFKGAFDNVEWS 589
Query: 321 VLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFILI 142
+ G + L ++ + +RS++G + E VT G QGS P+++ ++
Sbjct: 590 AALSRLADLGC--REMGLWQSFFSGRRAVIRSSSG-TVEVPVTRGCPQGSISGPFIWDIL 646
Query: 141 MDALTSDIQEEAPWCML--FADDIVLVGE 61
MD L +Q P+C L +ADD++L+ E
Sbjct: 647 MDVLLQRLQ---PYCQLSAYADDLLLLVE 672
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 64.5 bits (150), Expect = 1e-10
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 5/216 (2%)
Frame = -1
Query: 675 WLTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARR 496
++T FN + + P W ++ + K + V +YR I L+S K +EK + R
Sbjct: 472 YITKLFNAITKLGYFPQRWKMMKIIMIPKPGKNHTVASSYRPISLLSCISKLFEKCLLIR 531
Query: 495 MRDESE----VSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVP 328
+ + +QFGF T + + + + VF+D+ +A+D+V
Sbjct: 532 LNQHQTYHNIIPAHQFGFRESHGTIEQVNRITTEIRTAFEYREYCTAVFLDVSQAFDKVW 591
Query: 327 REVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFI 148
+ L + +K+ +P +L+++ VR S ++ G+ QGS L P L++
Sbjct: 592 LDGLMFKIKI-SLPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYL 650
Query: 147 LIMDALTSDIQEEAPWCM-LFADDIVLVGEEGPEIQ 43
+ T+DI + + FADD ++ IQ
Sbjct: 651 I----YTADIPTNSRLTVSTFADDTAILSRSRSPIQ 682
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 63.3 bits (147), Expect = 3e-10
Identities = 46/181 (25%), Positives = 88/181 (48%), Gaps = 5/181 (2%)
Frame = -1
Query: 672 LTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARR- 496
+ L FN + + P +W KS++V + K D +YR I L++ K +EK++ R
Sbjct: 471 ICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRI 530
Query: 495 ---MRDESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVPR 325
+R + + +QFGF T + + + + +F+D+ +A+DRV
Sbjct: 531 SPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRVWL 590
Query: 324 EVLWWSMKVKGVPGKYQRLVRA-MYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFI 148
+ L + + +K +P +L+++ +Y R +R S + ++ G+ QGS L P L+
Sbjct: 591 DGLLFKI-IKLLPQNTHKLLKSYLYNRVFA-IRCDTSTSRDCAIEAGVPQGSVLGPILYT 648
Query: 147 L 145
L
Sbjct: 649 L 649
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 62.9 bits (146), Expect = 4e-10
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 4/180 (2%)
Frame = -1
Query: 672 LTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARR- 496
+ L FN + + P +W KS++V + K D +YR I L++ K +EK++ R
Sbjct: 471 ICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRI 530
Query: 495 ---MRDESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVPR 325
+R + + +QFGF T + + + + +F+D+ +A+DRV
Sbjct: 531 SPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRVWL 590
Query: 324 EVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLFIL 145
+ L + + +K +P +L+++ +R S + ++ G+ QGS L P L+ L
Sbjct: 591 DGLLFKI-IKLLPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTL 649
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 62.1 bits (144), Expect = 7e-10
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 8/191 (4%)
Frame = -1
Query: 561 NYRGIKLMSHSMKAWEKVIARRMRDESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRAS 382
++R I + S ++ ++A R+ Q GF+P D + + +
Sbjct: 414 DFRPISVPSVLVRQLNAILATRLNSSINWDPRQRGFLPTDGCADNATIVDLVLRHSHKHF 473
Query: 381 KNVHMVFVDLEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEF 202
++ ++ +D+ KA+D + ++ +++ G P + V+ Y T + S+EF
Sbjct: 474 RSCYIANLDVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEF 533
Query: 201 SVTVGLHQGSALSPYLFILIMDALTSDIQEE--------APWCMLFADDIVLVGEEGPEI 46
G+ QG LSP LF L+MD L + E FADD+VL E +
Sbjct: 534 VPARGVKQGDPLSPILFNLVMDRLLRTLPSEIGAKVGNAITNAAAFADDLVLFAETRMGL 593
Query: 45 QRRLAKWKDLV 13
Q L K D +
Sbjct: 594 QVLLDKTLDFL 604
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 61.3 bits (142), Expect = 1e-09
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 10/225 (4%)
Frame = -1
Query: 702 KFLKADGCTWLTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMK 523
K L +L L +N + + PD W + + + K + +YR I L+S K
Sbjct: 394 KTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSK 453
Query: 522 AWEKVIARRM----RDESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVD 355
+E+++ +R+ + + +QFGF T I + Q + + VF+D
Sbjct: 454 MFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLD 513
Query: 354 LEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEF-SVTVGLHQ 178
+ +A+DRV E L + K +P ++ + + V+ AG++ + G+ Q
Sbjct: 514 ISEAFDRVWHEGLLLKL-AKILPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQ 572
Query: 177 GSALSPYLF-ILIMDALTSDIQEEAPW--CML--FADDIVLVGEE 58
GS L P L+ I D I +P ML +ADD +++ +
Sbjct: 573 GSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSD 617
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 61.3 bits (142), Expect = 1e-09
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 10/225 (4%)
Frame = -1
Query: 702 KFLKADGCTWLTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMK 523
K L +L L +N + + PD W + + + K + +YR I L+S K
Sbjct: 510 KTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSK 569
Query: 522 AWEKVIARRM----RDESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVD 355
+E+++ +R+ + + +QFGF T I + Q + + VF+D
Sbjct: 570 MFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLD 629
Query: 354 LEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEF-SVTVGLHQ 178
+ +A+DRV E L + K +P ++ + + V+ AG++ + G+ Q
Sbjct: 630 ISEAFDRVWHEGLLLKL-AKILPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQ 688
Query: 177 GSALSPYLF-ILIMDALTSDIQEEAPW--CML--FADDIVLVGEE 58
GS L P L+ I D I +P ML +ADD +++ +
Sbjct: 689 GSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSD 733
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 61.3 bits (142), Expect = 1e-09
Identities = 51/209 (24%), Positives = 104/209 (49%), Gaps = 7/209 (3%)
Frame = -1
Query: 672 LTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARR- 496
+ L FN + + P +W KS ++ + K + D + +YR I L++ K +EK + R
Sbjct: 13 ICLLFNAITKIGYFPQKWKKSIIIMIPKPEKD-KTQPSYRPISLLTCLSKLFEKGLLLRI 71
Query: 495 ---MRDESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKN---VHMVFVDLEKAYDR 334
++ + + QF F P + AI + ++ + R A ++ +F+D+ +A+DR
Sbjct: 72 SPHLKTHNTLPSYQFDF-PAKH--GAIEQVNRITTEIRTAFEHREYCTALFLDVAQAFDR 128
Query: 333 VPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYL 154
V + L + + ++ +P +L+++ + VR ++ S +F++ G+ QGS L P L
Sbjct: 129 VWLDGLMFKI-IQLLPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGPIL 187
Query: 153 FILIMDALTSDIQEEAPWCMLFADDIVLV 67
+ L + ++ Q FADD ++
Sbjct: 188 YTLYTADIPTNYQLT---IFTFADDTAII 213
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 61.3 bits (142), Expect = 1e-09
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 10/225 (4%)
Frame = -1
Query: 702 KFLKADGCTWLTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMK 523
K L +L L +N + + PD W + + + K + +YR I L+S K
Sbjct: 510 KALPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSK 569
Query: 522 AWEKVIARRM----RDESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVD 355
+E+++ +R+ + + +QFGF T I + Q + + VF+D
Sbjct: 570 MFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLD 629
Query: 354 LEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEF-SVTVGLHQ 178
+ +A+DRV E L + K +P ++ + + V+ AG++ + G+ Q
Sbjct: 630 ISEAFDRVWHEGLLLKL-AKILPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQ 688
Query: 177 GSALSPYLF-ILIMDALTSDIQEEAPW--CML--FADDIVLVGEE 58
GS L P L+ I D I +P ML +ADD +++ +
Sbjct: 689 GSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSD 733
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 61.3 bits (142), Expect = 1e-09
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 10/225 (4%)
Frame = -1
Query: 702 KFLKADGCTWLTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMK 523
K L +L L +N + + PD W + + + K + +YR I L+S K
Sbjct: 472 KTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSK 531
Query: 522 AWEKVIARRM----RDESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVD 355
+E+++ +R+ + + +QFGF T I + Q + + VF+D
Sbjct: 532 MFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLD 591
Query: 354 LEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEF-SVTVGLHQ 178
+ +A+DRV E L + K +P ++ + + V+ AG++ + G+ Q
Sbjct: 592 ISEAFDRVWHEGLLLKL-AKILPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQ 650
Query: 177 GSALSPYLF-ILIMDALTSDIQEEAPW--CML--FADDIVLVGEE 58
GS L P L+ I D I +P ML +ADD +++ +
Sbjct: 651 GSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSD 695
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 61.3 bits (142), Expect = 1e-09
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 10/225 (4%)
Frame = -1
Query: 702 KFLKADGCTWLTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMK 523
K L +L L +N + + PD W + + + K + +YR I L+S K
Sbjct: 510 KTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSK 569
Query: 522 AWEKVIARRM----RDESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVD 355
+E+++ +R+ + + +QFGF T I + Q + + VF+D
Sbjct: 570 MFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLD 629
Query: 354 LEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEF-SVTVGLHQ 178
+ +A+DRV E L + K +P ++ + + V+ AG++ + G+ Q
Sbjct: 630 ISEAFDRVWHEGLLLKL-AKILPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQ 688
Query: 177 GSALSPYLF-ILIMDALTSDIQEEAPW--CML--FADDIVLVGEE 58
GS L P L+ I D I +P ML +ADD +++ +
Sbjct: 689 GSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSD 733
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 57.6 bits (133), Expect = 2e-08
Identities = 50/221 (22%), Positives = 96/221 (43%), Gaps = 9/221 (4%)
Frame = -1
Query: 702 KFLKADGCTWLTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMK 523
+ L +L L FN + P W +S++ + K+ D+YR I L+ K
Sbjct: 269 RLLPDQALQFLVLIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPISLLPSLGK 328
Query: 522 AWEKVIARRM---RDESE-VSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVD 355
E++I R+ +D ++ + + QFGF T + + + + + F+D
Sbjct: 329 IMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGAFLD 388
Query: 354 LEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQG 175
+++A+DRV L + K + P + +V++ + +V S + G+ QG
Sbjct: 389 IQQAFDRVWHPGLLYKAK-RLFPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQG 447
Query: 174 SALSPYLF-ILIMDALT----SDIQEEAPWCMLFADDIVLV 67
S L P L+ + D T +++ EE +ADD ++
Sbjct: 448 SVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVL 488
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 57.2 bits (132), Expect = 2e-08
Identities = 53/225 (23%), Positives = 97/225 (43%), Gaps = 10/225 (4%)
Frame = -1
Query: 702 KFLKADGCTWLTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMK 523
K L +L L +N + + P+ W + + + K +YR I L+S K
Sbjct: 522 KTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKMILKPGKSSNEPKSYRPISLLSGLSK 581
Query: 522 AWEKVIARRM----RDESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVD 355
+E+++ +R+ + + +QFGF T I + Q + + VF+D
Sbjct: 582 MFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLD 641
Query: 354 LEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEF-SVTVGLHQ 178
+ +A+DRV E L + K +P ++ + + V+ AG++ + G+ Q
Sbjct: 642 ISEAFDRVWHEGLLLKL-AKILPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQ 700
Query: 177 GSALSPYLF-ILIMDALTSDIQEEAPW--CML--FADDIVLVGEE 58
GS L P L+ I D I +P ML +ADD +++ +
Sbjct: 701 GSNLGPLLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSD 745
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 56.0 bits (129), Expect = 5e-08
Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 10/225 (4%)
Frame = -1
Query: 702 KFLKADGCTWLTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMK 523
K L +L L +N + + P+ W + + + K +YR I L+S K
Sbjct: 510 KTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKMILKPGKSANEPRSYRPISLLSGLSK 569
Query: 522 AWEKVIARRMRD----ESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVD 355
+E+++ +R+ + + +QFGF + I + Q + + VF+D
Sbjct: 570 IFERLLLKRLFKVDLFKKAIPLHQFGFRKEHGSEQQIARVTQFILEAFERKEYCSAVFLD 629
Query: 354 LEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEF-SVTVGLHQ 178
+ +A+DRV E L + K +P ++ + + V+ AG++ + G+ Q
Sbjct: 630 ISEAFDRVWHEGLLLKL-AKILPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQ 688
Query: 177 GSALSPYLF-ILIMDALTSDIQEEAPW--CML--FADDIVLVGEE 58
GS L P L+ I D I +P ML +ADD +++ +
Sbjct: 689 GSNLGPLLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSD 733
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 55.6 bits (128), Expect = 6e-08
Identities = 49/221 (22%), Positives = 95/221 (42%), Gaps = 9/221 (4%)
Frame = -1
Query: 702 KFLKADGCTWLTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMK 523
+ L +L L FN + P W +S++ + K+ D+YR L+ K
Sbjct: 467 RLLPDQALQFLALIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPTSLLPSLGK 526
Query: 522 AWEKVIARRM---RDESE-VSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVD 355
E++I R+ +D ++ + + QFGF T + + + + + F+D
Sbjct: 527 IMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGAFLD 586
Query: 354 LEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQG 175
+++A+DRV L + K + P + +V++ + +V S + G+ QG
Sbjct: 587 IQQAFDRVWHPGLLYKAK-RLFPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQG 645
Query: 174 SALSPYLF-ILIMDALT----SDIQEEAPWCMLFADDIVLV 67
S L P L+ + D T +++ EE +ADD ++
Sbjct: 646 SVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVL 686
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 51.6 bits (118), Expect = 1e-06
Identities = 40/180 (22%), Positives = 77/180 (42%), Gaps = 5/180 (2%)
Frame = -1
Query: 675 WLTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARR 496
+L L +N + + P++W +S+ + K ++YR I L+S K E+++ +R
Sbjct: 75 YLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKR 134
Query: 495 MRD----ESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVP 328
+ D + +QFGF + + Q K F+D+ +A+DRV
Sbjct: 135 LYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVW 194
Query: 327 REVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEF-SVTVGLHQGSALSPYLF 151
+ L + + + +P L+ + VR + ++ G+ QGS L P L+
Sbjct: 195 HDGLLYKLS-RLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLY 253
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 51.6 bits (118), Expect = 1e-06
Identities = 40/180 (22%), Positives = 77/180 (42%), Gaps = 5/180 (2%)
Frame = -1
Query: 675 WLTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARR 496
+L L +N + + P++W +S+ + K ++YR I L+S K E+++ +R
Sbjct: 522 YLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILPKR 581
Query: 495 MRD----ESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVP 328
+ D + +QFGF + + Q K F+D+ +A+DRV
Sbjct: 582 LYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVW 641
Query: 327 REVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEF-SVTVGLHQGSALSPYLF 151
+ L + + + +P L+ + VR + ++ G+ QGS L P L+
Sbjct: 642 HDGLLYKLS-RLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLY 700
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 51.6 bits (118), Expect = 1e-06
Identities = 40/180 (22%), Positives = 77/180 (42%), Gaps = 5/180 (2%)
Frame = -1
Query: 675 WLTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARR 496
+L L +N + + P++W +S+ + K ++YR I L+S K E+++ +R
Sbjct: 522 YLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKR 581
Query: 495 MRD----ESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVP 328
+ D + +QFGF + + Q K F+D+ +A+DRV
Sbjct: 582 LYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVW 641
Query: 327 REVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEF-SVTVGLHQGSALSPYLF 151
+ L + + + +P L+ + VR + ++ G+ QGS L P L+
Sbjct: 642 HDGLLYKLS-RLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLY 700
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 51.6 bits (118), Expect = 1e-06
Identities = 40/180 (22%), Positives = 77/180 (42%), Gaps = 5/180 (2%)
Frame = -1
Query: 675 WLTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARR 496
+L L +N + + P++W +S+ + K ++YR I L+S K E+++ +R
Sbjct: 522 YLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKR 581
Query: 495 MRD----ESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVP 328
+ D + +QFGF + + Q K F+D+ +A+DRV
Sbjct: 582 LYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVW 641
Query: 327 REVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEF-SVTVGLHQGSALSPYLF 151
+ L + + + +P L+ + VR + ++ G+ QGS L P L+
Sbjct: 642 HDGLLYKLS-RLIPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLY 700
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,966,084
Number of Sequences: 53049
Number of extensions: 765829
Number of successful extensions: 2158
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2141
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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