Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0040
(714 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 88 5e-18
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 88 5e-18
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 88 5e-18
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 75 7e-14
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 44 1e-04
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 40 0.002
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 29 2.5
Z92847-6|CAB07423.1| 1076|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z73911-9|CAA98143.1| 1076|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z99281-48|CAE18025.2| 661|Caenorhabditis elegans Hypothetical p... 28 7.6
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 28 7.6
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 88.2 bits (209), Expect = 5e-18
Identities = 57/172 (33%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
Frame = -1
Query: 660 FNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMRDES 481
FN+ +P W S +FK KGD + +NYR I L+ K + K + RMR
Sbjct: 419 FNRYLHSRNVPKPWKTSKTTLIFK-KGDRENLENYRPICLLPVLYKVFTKCLLNRMRRSL 477
Query: 480 EVSQ--NQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVPREVLWWS 307
+ +Q Q GF ST D I SL++L E R + +VF+D +KA+D V + +W S
Sbjct: 478 DEAQPVEQAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTLVFIDFKKAFDTVEHQAIWKS 537
Query: 306 MKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLF 151
+ +G G Y L++ Y +T + VT G+ QG +SP LF
Sbjct: 538 LDEQGADGAYIDLLKECYKNCTTNF-TPFHRPVAVPVTKGVRQGDPISPNLF 588
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 88.2 bits (209), Expect = 5e-18
Identities = 57/172 (33%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
Frame = -1
Query: 660 FNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMRDES 481
FN+ +P W S +FK KGD + +NYR I L+ K + K + RMR
Sbjct: 590 FNRYLHSRNVPKPWKTSKTTLIFK-KGDRENLENYRPICLLPVLYKVFTKCLLNRMRRSL 648
Query: 480 EVSQ--NQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVPREVLWWS 307
+ +Q Q GF ST D I SL++L E R + +VF+D +KA+D V + +W S
Sbjct: 649 DEAQPVEQAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTLVFIDFKKAFDSVEHQAIWKS 708
Query: 306 MKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLF 151
+ +G G Y L++ Y +T + VT G+ QG +SP LF
Sbjct: 709 LDEQGADGAYIDLLKECYKNCTTNF-TPFHRPVAVPVTKGVRQGDPISPNLF 759
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 88.2 bits (209), Expect = 5e-18
Identities = 57/172 (33%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
Frame = -1
Query: 660 FNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMRDES 481
FN+ +P W S +FK KGD + +NYR I L+ K + K + RMR
Sbjct: 329 FNRYLHSRNVPKPWKTSKTTLIFK-KGDRENLENYRPICLLPVLYKVFTKCLLNRMRRSL 387
Query: 480 EVSQ--NQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVPREVLWWS 307
+ +Q Q GF ST D I SL++L E R + +VF+D +KA+D V + +W S
Sbjct: 388 DEAQPVEQAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTLVFIDFKKAFDSVEHQAIWKS 447
Query: 306 MKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPYLF 151
+ +G G Y L++ Y +T + VT G+ QG +SP LF
Sbjct: 448 LDEQGADGAYIDLLKECYKNCTTNF-TPFHRPVAVPVTKGVRQGDPISPNLF 498
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 74.5 bits (175), Expect = 7e-14
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 4/213 (1%)
Frame = -1
Query: 684 GCTWLTLFFNKLFQEEAMPDEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVI 505
G ++L +N +PD+W K++++ + K K D + +YR I L+S K EK I
Sbjct: 363 GYSFLAYLYNVSLSTNIIPDKWKKANVIMIPKPKKDPAIASSYRPISLLSPIAKLLEKAI 422
Query: 504 ARRMRDESEVSQNQFGFMPGRSTTDAIFSLRQLC---EKYRRASKNVHMVFVDLEKAYDR 334
+R+++ E +Q GF P STT A+ + + + M +DL A+D+
Sbjct: 423 LKRIKNSIESPAHQHGFKPEHSTTTAVIQVTNDIIGGLNMKNPPERAIMACLDLRAAFDK 482
Query: 333 VPREVLWWS-MKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEFSVTVGLHQGSALSPY 157
VP + L M+ +G+ K + + + S ++ G+ QGS +SP
Sbjct: 483 VPTKKLCNDLMEAQGIEPKIKLWLGNYLHKRLIRTSHDNHWSKWHTLLGGVPQGSVISPN 542
Query: 156 LFILIMDALTSDIQEEAPWCMLFADDIVLVGEE 58
LF + + + ++ + +ADD+ ++ +
Sbjct: 543 LFTFYLKDMPT---QQDTMLISYADDMSIIARD 572
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/104 (27%), Positives = 49/104 (47%)
Frame = -1
Query: 381 KNVHMVFVDLEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDEF 202
+ + ++++D KA+DR+P ++L + V S VR S
Sbjct: 12 EQIDIIYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRK 71
Query: 201 SVTVGLHQGSALSPYLFILIMDALTSDIQEEAPWCMLFADDIVL 70
T G+ QG+ LSP LF + ++ ++S + E+ C FADD L
Sbjct: 72 FATCGVPQGAVLSPLLFGIYVNDISSILPEKVA-CKQFADDTKL 114
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/78 (29%), Positives = 40/78 (51%)
Frame = -1
Query: 384 SKNVHMVFVDLEKAYDRVPREVLWWSMKVKGVPGKYQRLVRAMYGRASTYVRSAAGDSDE 205
++++ +VF+D +KA+D V + +W S+ +G Y L++ Y +T
Sbjct: 34 TRSLTLVFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYKNCTTNFTPFLRPI-T 92
Query: 204 FSVTVGLHQGSALSPYLF 151
VT G+ QG +SP LF
Sbjct: 93 VPVTKGVRQGDPISPNLF 110
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 39.5 bits (88), Expect = 0.002
Identities = 48/221 (21%), Positives = 92/221 (41%), Gaps = 3/221 (1%)
Frame = -1
Query: 672 LTLFFNKLFQEEAMPDEWCKSSLVP-VFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARR 496
L+ +F+ E P+ W ++P K + I+ NY + EKVI
Sbjct: 797 LSRILRNIFETEDYPESWNHCIVIPDPPKIRELIRDPKNYALNYYFDPFLGVMEKVICDF 856
Query: 495 MRDESEVSQNQFGFMPGRSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRVPREVL 316
++ E N+ F P T D E+Y A K V ++ L A+D+VP E L
Sbjct: 857 LQKE-----NEHKFSP--RTKDPTHCKY---EEYVEAHKRVDLIHFKLSTAFDKVPHEFL 906
Query: 315 WWSMKVKGVPGKYQRLVRAMYGRASTYVR-SAAGDSDEFSVTVGLHQGSALSPYLFILIM 139
+ V + R + + V+ + +S++ + +G +GS ++F++ +
Sbjct: 907 ISKLNDFNVHPTLRNWFRKLMSPKTFSVQVNDHLESEKHNCQIGAPRGSESRQFMFLVFI 966
Query: 138 DALTSDIQEEAPW-CMLFADDIVLVGEEGPEIQRRLAKWKD 19
++L +I ++D+ + E I++ L K +D
Sbjct: 967 NSLLCEIPINISCSACAISEDLEIYSHEPIMIEKSLRKIED 1007
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 30.7 bits (66), Expect = 1.1
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Frame = -1
Query: 606 LVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMRDESEVSQNQF---GFMPG--- 445
L+PVF + Q D GI + + + K ++ RDE +S QF G PG
Sbjct: 903 LLPVFYDLRNDQNPDVRNGILIHLYD---FVKFLSPEKRDEMILSLPQFFPIGAQPGNQA 959
Query: 444 -----RSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRV 331
RS + I L +LC Y N HM + L A DRV
Sbjct: 960 QNGDWRSRFELISQLSKLCSLYSIQDVNFHMSGIALTLADDRV 1002
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 30.7 bits (66), Expect = 1.1
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Frame = -1
Query: 606 LVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMRDESEVSQNQF---GFMPG--- 445
L+PVF + Q D GI + + + K ++ RDE +S QF G PG
Sbjct: 1029 LLPVFYDLRNDQNPDVRNGILIHLYD---FVKFLSPEKRDEMILSLPQFFPIGAQPGNQA 1085
Query: 444 -----RSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRV 331
RS + I L +LC Y N HM + L A DRV
Sbjct: 1086 QNGDWRSRFELISQLSKLCSLYSIQDVNFHMSGIALTLADDRV 1128
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
F16A11.3b protein.
Length = 1364
Score = 30.7 bits (66), Expect = 1.1
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Frame = -1
Query: 606 LVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMRDESEVSQNQF---GFMPG--- 445
L+PVF + Q D GI + + + K ++ RDE +S QF G PG
Sbjct: 903 LLPVFYDLRNDQNPDVRNGILIHLYD---FVKFLSPEKRDEMILSLPQFFPIGAQPGNQA 959
Query: 444 -----RSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRV 331
RS + I L +LC Y N HM + L A DRV
Sbjct: 960 QNGDWRSRFELISQLSKLCSLYSIQDVNFHMSGIALTLADDRV 1002
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
F16A11.3a protein.
Length = 1490
Score = 30.7 bits (66), Expect = 1.1
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Frame = -1
Query: 606 LVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMRDESEVSQNQF---GFMPG--- 445
L+PVF + Q D GI + + + K ++ RDE +S QF G PG
Sbjct: 1029 LLPVFYDLRNDQNPDVRNGILIHLYD---FVKFLSPEKRDEMILSLPQFFPIGAQPGNQA 1085
Query: 444 -----RSTTDAIFSLRQLCEKYRRASKNVHMVFVDLEKAYDRV 331
RS + I L +LC Y N HM + L A DRV
Sbjct: 1086 QNGDWRSRFELISQLSKLCSLYSIQDVNFHMSGIALTLADDRV 1128
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = -1
Query: 210 DEFSVTVGLHQGSALSPYLFILIMDALTSDIQEEAPWCMLFADDIVLVGEEGPEIQRRL 34
+ + ++ G+ QGS P LFIL ++ L D+ FADD+ + + IQ +
Sbjct: 873 NSYPISSGVPQGSVSGPLLFILFINNLLIDLAPTIN-ISCFADDVKIFHTDPTIIQNSI 930
>Z92847-6|CAB07423.1| 1076|Caenorhabditis elegans Hypothetical
protein T12A7.5 protein.
Length = 1076
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Frame = +2
Query: 278 YFPGTPFTF-MLHHKTSRGTLSYAFSKSTNTMC-----TFLLARRYFSHN 409
Y F F +L+ R L + F +S+N C TF++ R+FSHN
Sbjct: 494 YKSSIKFKFQILYLDNQRAVLYWCFRRSSNGTCIQHDVTFMIRSRHFSHN 543
>Z73911-9|CAA98143.1| 1076|Caenorhabditis elegans Hypothetical
protein T12A7.5 protein.
Length = 1076
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Frame = +2
Query: 278 YFPGTPFTF-MLHHKTSRGTLSYAFSKSTNTMC-----TFLLARRYFSHN 409
Y F F +L+ R L + F +S+N C TF++ R+FSHN
Sbjct: 494 YKSSIKFKFQILYLDNQRAVLYWCFRRSSNGTCIQHDVTFMIRSRHFSHN 543
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 473 HRTNSGSCRDAVQRTPFFPCANCAKNIAVQV 381
H TN G C+ A + ++PC+ ++ AV +
Sbjct: 3364 HTTNEGLCQAATKLQMYYPCSPFVQDFAVNL 3394
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 473 HRTNSGSCRDAVQRTPFFPCANCAKNIAVQV 381
H TN G C+ A + ++PC+ ++ AV +
Sbjct: 3364 HTTNEGLCQAATKLQMYYPCSPFVQDFAVNL 3394
>Z99281-48|CAE18025.2| 661|Caenorhabditis elegans Hypothetical
protein Y57G11C.42 protein.
Length = 661
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 238 RTSSTVHSSNKPLVFPWHSFHFHAPPQN 321
RT+ +NK V P+ HF APP+N
Sbjct: 491 RTTVAPGVTNKVSVIPFRPLHFTAPPRN 518
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 27.9 bits (59), Expect = 7.6
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = -1
Query: 573 QVCDNYRGIKLMSHSMKAWEKVIARRMRDESEVSQNQF-GFMPGRSTTDAIFSLRQLCEK 397
Q D +K + +MK K + + S S NQ G S ++FSL L
Sbjct: 547 QFSDALPTVKSIPDAMKKGVKNVTLELNQMSLESLNQSDGIGHSASALRSVFSLLDLESS 606
Query: 396 YRRASKNVHMVFVDLEKAYDRVPREVLW 313
+ +V V+++KA D+ + LW
Sbjct: 607 INKLKGVDGIVRVEIDKAADKSELQSLW 634
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,762,233
Number of Sequences: 27780
Number of extensions: 388602
Number of successful extensions: 1049
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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