Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0040
         (714 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    25   0.94 
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.2  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               22   5.0  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   6.6  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   6.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.8  

>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = -1

Query: 627 DEWCKSSLVPVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMRDE 484
           D W  S  V VF S  +  V +NY G  + + +MK +     R   DE
Sbjct: 277 DVWMSSCSVFVFLSLMEFAVVNNYMG-PVATKAMKGYSDEDLREAIDE 323


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 278 TNGLFELCTVELVRTYAP 225
           TN +FEL TVE + T  P
Sbjct: 265 TNNIFELVTVEPILTERP 282


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 446 DAVQRTPFFPCANCAKNIAVQVKMCTWCL 360
           D +Q       AN  KNI++ VKM + C+
Sbjct: 92  DEIQLDKLVEMAN-RKNISIDVKMLSECI 119


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -1

Query: 600 PVFKSKGDIQVCDNYRGIKLMSHSMKAWEKVIARRMRDESEVSQ 469
           P   SK  +  C    G+KL+S  +   EKV    +    E+++
Sbjct: 51  PRINSKSPLLSCACPDGLKLLSDGLMCVEKVSTTIVPTTQEINK 94


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 650 NLLKNKVSHVHPSAF 694
           NL +NKV HV   AF
Sbjct: 508 NLARNKVQHVERYAF 522


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 478 GITEPIRVHAGTQYNGRHF 422
           G+T+  R+  GT  NG+ F
Sbjct: 231 GMTDNSRLEPGTNKNGKFF 249


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,029
Number of Sequences: 438
Number of extensions: 5268
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)