Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0035
         (518 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071064-1|AAL48686.1|  220|Drosophila melanogaster RE14241p pro...    31   0.71 
AE014297-1726|AAF54971.1|  220|Drosophila melanogaster CG9588-PA...    31   0.71 
AE014296-2521|AAF49627.1|  342|Drosophila melanogaster CG7463-PA...    30   2.2  

>AY071064-1|AAL48686.1|  220|Drosophila melanogaster RE14241p
           protein.
          Length = 220

 Score = 31.5 bits (68), Expect = 0.71
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 18  VRRENADLTFELVPKPWAKPGLLGCQI 98
           V+R    L   LVPK W+  GLLGC I
Sbjct: 185 VKRGEQQLDLILVPKTWSGRGLLGCNI 211


>AE014297-1726|AAF54971.1|  220|Drosophila melanogaster CG9588-PA
           protein.
          Length = 220

 Score = 31.5 bits (68), Expect = 0.71
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 18  VRRENADLTFELVPKPWAKPGLLGCQI 98
           V+R    L   LVPK W+  GLLGC I
Sbjct: 185 VKRGEQQLDLILVPKTWSGRGLLGCNI 211


>AE014296-2521|AAF49627.1|  342|Drosophila melanogaster CG7463-PA
           protein.
          Length = 342

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 74  AWFTGMSDTNKEHFLIRHILKYFSLNFLYINV 169
           AW    S  N+  + +RH+  +FS  FL +NV
Sbjct: 22  AWLLSESGLNESSYKVRHLSMHFSRVFLSVNV 53


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,135,191
Number of Sequences: 53049
Number of extensions: 457636
Number of successful extensions: 740
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)