Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0034
(659 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 225 6e-58
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 222 7e-57
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 221 2e-56
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 219 6e-56
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 213 3e-54
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 205 8e-52
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 200 2e-50
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 195 9e-49
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 191 1e-47
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 187 2e-46
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 186 3e-46
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 183 4e-45
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 173 2e-42
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 173 3e-42
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 169 5e-41
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 164 2e-39
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 161 2e-38
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 154 2e-36
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 146 5e-34
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 145 1e-33
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 138 8e-32
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 138 1e-31
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 138 1e-31
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 136 6e-31
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 135 8e-31
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 134 2e-30
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 132 7e-30
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 130 3e-29
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 130 3e-29
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 120 4e-26
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 120 4e-26
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 118 9e-26
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 117 3e-25
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 112 8e-24
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 111 1e-23
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 111 1e-23
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 110 3e-23
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 109 6e-23
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 107 2e-22
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 106 5e-22
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 105 7e-22
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 105 9e-22
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 105 9e-22
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 102 7e-21
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 102 7e-21
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 102 9e-21
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 101 2e-20
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 101 2e-20
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 99 5e-20
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 100 6e-20
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 99 1e-19
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 98 2e-19
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 97 4e-19
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 96 8e-19
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 95 1e-18
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 95 1e-18
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 95 2e-18
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 95 2e-18
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 94 3e-18
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 93 5e-18
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 93 5e-18
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 93 5e-18
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 91 2e-17
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 91 3e-17
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 89 9e-17
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 89 9e-17
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 89 1e-16
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 89 1e-16
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 89 1e-16
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 87 3e-16
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 87 4e-16
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 87 4e-16
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 87 5e-16
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 85 1e-15
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 85 1e-15
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 85 2e-15
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 84 3e-15
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 83 4e-15
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 83 6e-15
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 83 6e-15
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 83 6e-15
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 82 1e-14
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 80 5e-14
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 79 7e-14
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 74 4e-12
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 74 4e-12
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 74 4e-12
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 73 8e-12
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 70 4e-11
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 69 1e-10
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 60 6e-08
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 59 8e-08
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 58 1e-07
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 58 1e-07
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 56 8e-07
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 56 1e-06
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 55 2e-06
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 53 5e-06
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 51 3e-05
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 50 5e-05
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 48 2e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 2e-04
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 46 8e-04
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 45 0.001
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 43 0.006
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 43 0.008
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 43 0.008
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 41 0.030
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 38 0.21
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 37 0.49
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.1
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 35 1.5
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 35 1.5
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 35 1.5
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 2.0
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 2.0
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 8.0
UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2; Crypto... 33 8.0
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 8.0
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 225 bits (551), Expect = 6e-58
Identities = 115/206 (55%), Positives = 135/206 (65%), Gaps = 1/206 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P + N+AH G SV + FSLHLAG+SS S Q PLFV AV
Sbjct: 129 YPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAV 188
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 391
+TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILIL
Sbjct: 189 LVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILIL 248
Query: 392 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 571
PGFGIISH+++ GKKE F FIV AHH+FTVG+D+DTRAYFTSA
Sbjct: 249 PGFGIISHVVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSA 308
Query: 572 TIIIAVPTGIKIFR*LATIHGTQINY 649
T+IIA+PTG+K+F LAT+HG I +
Sbjct: 309 TMIIAIPTGVKVFSWLATLHGGAIKW 334
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 222 bits (542), Expect = 7e-57
Identities = 112/206 (54%), Positives = 135/206 (65%), Gaps = 1/206 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P + N+AH G SV + FSLHLAG+SS + Q PLFV +V
Sbjct: 129 YPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSV 188
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 391
+TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILIL
Sbjct: 189 LVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILIL 248
Query: 392 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 571
PGFG+ISH+++ GKKE F FIV AHH+FTVG+D+DTRAYFTSA
Sbjct: 249 PGFGMISHVVTYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSA 308
Query: 572 TIIIAVPTGIKIFR*LATIHGTQINY 649
T+IIA+PTG+K+F LAT+HG I +
Sbjct: 309 TMIIAIPTGVKVFSWLATLHGGAIKW 334
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 221 bits (539), Expect = 2e-56
Identities = 112/207 (54%), Positives = 136/207 (65%), Gaps = 1/207 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P + N +H G SV + FSLHLAG+SS + Q PLFV +V
Sbjct: 129 YPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSV 188
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 391
ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILIL
Sbjct: 189 LITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILIL 248
Query: 392 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 571
PGFG+ISHI++ GKKE F FIV AHH+FTVG+D+DTRAYFTSA
Sbjct: 249 PGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSA 308
Query: 572 TIIIAVPTGIKIFR*LATIHGTQINYN 652
T+IIA+PTG+K+F LAT+HG+ + ++
Sbjct: 309 TMIIAIPTGVKVFSWLATLHGSNMKWS 335
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 219 bits (534), Expect = 6e-56
Identities = 114/207 (55%), Positives = 134/207 (64%), Gaps = 1/207 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P S + H G SV + FSLHLAG SS + D++ LF +V
Sbjct: 113 YPPLSLILGHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSV 172
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 391
ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYILIL
Sbjct: 173 FITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILIL 232
Query: 392 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 571
PGFGIISH+I E GKKETF FIV AHH+FT+G+D+DTRAYFTSA
Sbjct: 233 PGFGIISHMIFNESGKKETFGMLGMIYAMLTIGFLGFIVWAHHMFTIGMDVDTRAYFTSA 292
Query: 572 TIIIAVPTGIKIFR*LATIHGTQINYN 652
T+IIA+PTGIKIF +AT G ++ N
Sbjct: 293 TMIIAIPTGIKIFSWMATFSGVKLMNN 319
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 213 bits (520), Expect = 3e-54
Identities = 112/206 (54%), Positives = 133/206 (64%), Gaps = 1/206 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P S +H G +V + FSLHL+G+SS + +LPLFV +V
Sbjct: 132 YPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSV 191
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 391
+TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEVYILIL
Sbjct: 192 LVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILIL 251
Query: 392 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 571
PGFGIISHI+S G K F F+V AHH+FTVG+D+DTRAYFT+A
Sbjct: 252 PGFGIISHIVSTFSG-KPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAA 310
Query: 572 TIIIAVPTGIKIFR*LATIHGTQINY 649
T+IIAVPTGIKIF +AT+ G I Y
Sbjct: 311 TMIIAVPTGIKIFSWIATMWGGSIQY 336
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 205 bits (500), Expect = 8e-52
Identities = 106/201 (52%), Positives = 130/201 (64%), Gaps = 1/201 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P S +H G SV + FSLHL+GISS + +LPLFV A+
Sbjct: 129 YPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAI 188
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 391
+TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEVYILI+
Sbjct: 189 FVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILII 248
Query: 392 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 571
PGFG++SHI+S G K F F+V +HH++ VG+D+DTRAYFT+A
Sbjct: 249 PGFGMVSHIVSAFSG-KPVFGYLGMVYAMFSIGILGFLVWSHHMYAVGLDVDTRAYFTAA 307
Query: 572 TIIIAVPTGIKIFR*LATIHG 634
T+IIAVPTGIKIF LAT++G
Sbjct: 308 TMIIAVPTGIKIFSWLATLYG 328
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 200 bits (489), Expect = 2e-50
Identities = 106/199 (53%), Positives = 129/199 (64%), Gaps = 1/199 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P SS +H G +V + FSLH++G SS S ++PLFV ++
Sbjct: 137 YPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSI 196
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 391
+TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEVYILIL
Sbjct: 197 LVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILIL 256
Query: 392 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 571
PGFG+ISHI+S +K F FIV AHH++TVG+D+DTRAYFT+A
Sbjct: 257 PGFGMISHIVS-TFSRKPVFGYIGMVYAMVSIGVLGFIVWAHHMYTVGLDVDTRAYFTAA 315
Query: 572 TIIIAVPTGIKIFR*LATI 628
T+IIAVPTGIKIF +ATI
Sbjct: 316 TMIIAVPTGIKIFSWIATI 334
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 195 bits (475), Expect = 9e-49
Identities = 105/204 (51%), Positives = 124/204 (60%), Gaps = 1/204 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P SS AH G SV + FSLHL ISS S ++PLFV A+
Sbjct: 130 YPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAI 189
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 391
ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHPEVYILI+
Sbjct: 190 FITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILII 249
Query: 392 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 571
PGFGI+SHI+S KK F F+V +HH++ VG+D DTRAYFTSA
Sbjct: 250 PGFGIVSHIVS-TYSKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSA 308
Query: 572 TIIIAVPTGIKIFR*LATIHGTQI 643
T+IIA+PTGIKIF LATI+G I
Sbjct: 309 TMIIAIPTGIKIFSWLATIYGGSI 332
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 191 bits (466), Expect = 1e-47
Identities = 104/209 (49%), Positives = 126/209 (60%), Gaps = 1/209 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P S +H G SV + F LHL+GISS +L LF AV
Sbjct: 130 YPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAV 189
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 391
ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI+
Sbjct: 190 VITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILII 249
Query: 392 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 571
PGFGIIS IS K F F+V +HH++TVG+D+DTRAYFT+A
Sbjct: 250 PGFGIISTTIS-ANSNKSVFGYLGMVYAMCSIGILGFVVWSHHMYTVGLDVDTRAYFTAA 308
Query: 572 TIIIAVPTGIKIFR*LATIHGTQINYNPN 658
T+IIAVPTGIKIF LAT +G +++ P+
Sbjct: 309 TLIIAVPTGIKIFSWLATCYGGSLHFIPS 337
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 187 bits (455), Expect = 2e-46
Identities = 101/209 (48%), Positives = 123/209 (58%), Gaps = 2/209 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P SS +H G SV + FS HL GI S LPLFV +V
Sbjct: 133 YPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSV 192
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 391
+T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHPEVYILIL
Sbjct: 193 AVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILIL 252
Query: 392 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 571
PGFG++SHII+ KK F FIV AHH++T GID T+AYFT+A
Sbjct: 253 PGFGLVSHIIA-TFSKKRVFGHVPMIAAMLMIGLIGFIVWAHHMYTSGIDTSTKAYFTAA 311
Query: 572 TIIIAVPTGIKIFR*LATIHGTQI-NYNP 655
T++IA+PTGIK+F +AT+ G I Y P
Sbjct: 312 TMVIAIPTGIKVFNWIATMWGGSIWMYTP 340
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 186 bits (454), Expect = 3e-46
Identities = 101/209 (48%), Positives = 123/209 (58%), Gaps = 1/209 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P SS AH G SV + F+LHL ISS + +LPLFV ++
Sbjct: 130 YPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSI 189
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 391
ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYILI+
Sbjct: 190 FITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILII 249
Query: 392 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 571
PGFGIISH++S KK F F+V +HH++ VG+D DTRAYFTSA
Sbjct: 250 PGFGIISHVVS-TYSKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSA 308
Query: 572 TIIIAVPTGIKIFR*LATIHGTQINYNPN 658
T+IIA+PTGIKIF L N N N
Sbjct: 309 TMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 183 bits (445), Expect = 4e-45
Identities = 100/206 (48%), Positives = 123/206 (59%), Gaps = 1/206 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P S +H V + F LHL+GISS +L LF AV
Sbjct: 156 YPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAV 215
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 391
ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYILI+
Sbjct: 216 VITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILII 275
Query: 392 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 571
PGFGIIS +IS K F FIV +HH++TVG+D+DTRAYFT+A
Sbjct: 276 PGFGIISTVIS-ANSNKNVFGYLGMVYAMMSIGLLGFIVWSHHMYTVGLDVDTRAYFTAA 334
Query: 572 TIIIAVPTGIKIFR*LATIHGTQINY 649
T+IIA+PTG+KIF LAT +G +++
Sbjct: 335 TLIIAIPTGVKIFSWLATCYGGSLHF 360
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 173 bits (422), Expect = 2e-42
Identities = 90/186 (48%), Positives = 114/186 (61%)
Frame = +2
Query: 92 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 271
SLH+AG SS + ++PLFV +V +TAF A AIT+
Sbjct: 192 SLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFVWSVLVTAFLLLLALPVLAAAITM 251
Query: 272 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 451
LLTDRN T+F+D AGGGDP LYQHLF FFGHPEVYI+ILPGFGIIS I+S +K F
Sbjct: 252 LLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIMILPGFGIISQIVS-TFSRKPVF 310
Query: 452 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIH 631
F+V AHH+FT G+ ++ + YFT+AT++IAVPTGIKIF +ATI
Sbjct: 311 GYLGMAYAMVAIGVVGFVVWAHHMFTTGMSVNVKMYFTAATMVIAVPTGIKIFSWIATIW 370
Query: 632 GTQINY 649
G I++
Sbjct: 371 GGSISF 376
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 173 bits (421), Expect = 3e-42
Identities = 91/206 (44%), Positives = 123/206 (59%), Gaps = 1/206 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P +S +H G S+ + F+LHL+G+SS + +LPLFV +V
Sbjct: 147 YPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSV 206
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 391
ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+
Sbjct: 207 LITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIV 266
Query: 392 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 571
P FG++S I+ Q KK F F V +HH+FTVG+D D+RAYF+ A
Sbjct: 267 PVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFTVGLDADSRAYFSGA 325
Query: 572 TIIIAVPTGIKIFR*LATIHGTQINY 649
++IIA+PTG KIF LATI+G + +
Sbjct: 326 SLIIAIPTGSKIFSWLATIYGGTLRW 351
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 169 bits (411), Expect = 5e-41
Identities = 89/206 (43%), Positives = 122/206 (59%), Gaps = 1/206 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P S+ R+V F++H++G SS + ++PLF +V
Sbjct: 235 YPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGMTLHKVPLFAWSV 294
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 391
+TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFGHPEVYI+IL
Sbjct: 295 FVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIVIL 354
Query: 392 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 571
P FG+ISHI++ KK F F+V AHH++TVG+ + +AYF A
Sbjct: 355 PAFGVISHIVA-TFSKKPIFGYLPMVYALVAIGGLGFVVWAHHMYTVGMTLTQQAYFMVA 413
Query: 572 TIIIAVPTGIKIFR*LATIHGTQINY 649
T++IAVPTGIKIF +AT+ I++
Sbjct: 414 TMVIAVPTGIKIFSWIATMWMGSISF 439
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 164 bits (398), Expect = 2e-39
Identities = 84/186 (45%), Positives = 108/186 (58%), Gaps = 1/186 (0%)
Frame = +2
Query: 80 ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*AVGITAFXXXXXXXXXA 256
+ FSLH+AG+SS F L P+ + + T+ A
Sbjct: 147 LAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTSILLVTSVPVLA 206
Query: 257 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 436
+T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+ +
Sbjct: 207 AGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSSA 266
Query: 437 KKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR* 616
K F F+V HH+F G+DIDTRAYFT+AT++IAVPTG+K+F
Sbjct: 267 KLHVFGKIGMSWASMGIAWMGFLVWGHHMFVAGLDIDTRAYFTAATLMIAVPTGVKVFNW 326
Query: 617 LATIHG 634
LATI G
Sbjct: 327 LATIFG 332
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 161 bits (390), Expect = 2e-38
Identities = 73/121 (60%), Positives = 91/121 (75%)
Frame = +2
Query: 287 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXX 466
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ GK+E F
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPFGYLGM 250
Query: 467 XXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 646
F+V AHH+FTVG+D+DTRAYFT+AT+IIAVPTGIK+F +AT+ G+ +
Sbjct: 251 VYAMIAIGVLGFLVWAHHMFTVGMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQ 310
Query: 647 Y 649
+
Sbjct: 311 W 311
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 154 bits (374), Expect = 2e-36
Identities = 91/208 (43%), Positives = 105/208 (50%), Gaps = 1/208 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P + N+AH G SV + FSLHLAGISS S Q PLFV +V
Sbjct: 130 YPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSV 189
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 391
ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILIL
Sbjct: 190 LITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILIL 249
Query: 392 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 571
PGFG+ISH+++ GKKE F FIV A
Sbjct: 250 PGFGMISHVVTYYAGKKEPFGYMGMVWAMLSIGFLGFIVWAXXXXXXXXXXXXXXXXXXX 309
Query: 572 TIIIAVPTGIKIFR*LATIHGTQINYNP 655
LAT+HG I ++P
Sbjct: 310 XXXXXXXXXXXXXXWLATLHGGTIKWDP 337
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 146 bits (353), Expect = 5e-34
Identities = 76/119 (63%), Positives = 81/119 (68%), Gaps = 1/119 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P SSNIAH G SV + FSLHLAGISS SFDQ+PLF+ AV
Sbjct: 102 YPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMSFDQMPLFIWAV 161
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 388
GITA AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 162 GITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 145 bits (351), Expect = 1e-33
Identities = 75/187 (40%), Positives = 98/187 (52%)
Frame = +2
Query: 95 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITIL 274
LH GI S + DQ+ +FV +T+F AG++ L
Sbjct: 160 LHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSVPVLAGSLLFL 219
Query: 275 LTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFX 454
L DRN NTSF+D GG+P+LYQHLF FFGHPEVY++ILP FGIIS + K F
Sbjct: 220 LLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVFGIISEAVLFLTDKDRLFG 279
Query: 455 XXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 634
V HH++T G+DIDTR YF++AT+IIA+P+ +KIF L T G
Sbjct: 280 QTSMTFASIWIAVLGTSVWGHHMYTAGLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFG 339
Query: 635 TQINYNP 655
+ P
Sbjct: 340 SNQKMQP 346
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 138 bits (335), Expect = 8e-32
Identities = 76/174 (43%), Positives = 93/174 (53%)
Frame = +2
Query: 89 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 268
FSLHLAG+SS S + V A T+ A IT
Sbjct: 243 FSLHLAGVSSLIGSVNFISTIFSRLSFNCS-----IIVWAYLFTSVLLLLSLPVLASGIT 297
Query: 269 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 448
+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI +
Sbjct: 298 MLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHICMSLSNNDSS 357
Query: 449 FXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 610
F +V HH+F VG D T +F+S T+II VPTGIK+F
Sbjct: 358 FGYYGLICAMASIVCLGSVVWGHHMFMVGFDSLTGVFFSSITMIIGVPTGIKVF 411
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 138 bits (334), Expect = 1e-31
Identities = 72/115 (62%), Positives = 78/115 (67%), Gaps = 1/115 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P SSNIAH G SV + FSLHLAGISS SFDQ+PLFV AV
Sbjct: 126 YPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAV 185
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 376
GITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP++
Sbjct: 186 GITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 138 bits (333), Expect = 1e-31
Identities = 73/174 (41%), Positives = 97/174 (55%)
Frame = +2
Query: 89 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 268
F++HL GISS SF LF+ A ITA AG +T
Sbjct: 151 FAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVT 210
Query: 269 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 448
++L DRN NTSF+D GGGD IL+QH+F FFGHPEVYI++LP FG+IS I+ + G +
Sbjct: 211 LILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLISTIV-EVIGFRCV 269
Query: 449 FXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 610
F V AHH+F VG+D+D+RAYF +I+I +PT +K+F
Sbjct: 270 FSTVAMIYSMILIAILGMFVWAHHMFVVGMDVDSRAYFGGVSILIGLPTCVKLF 323
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 136 bits (328), Expect = 6e-31
Identities = 63/123 (51%), Positives = 81/123 (65%)
Frame = +2
Query: 257 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 436
G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+IS
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVISTNY- 268
Query: 437 KKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR* 616
+ F +V HH++T G+++DTRAYFTS TI+I++PTG K+F
Sbjct: 269 CRNLFGNQSMILAMGCIAVLGSLVWVHHMYTTGLEVDTRAYFTSTTILISIPTGTKVFNW 328
Query: 617 LAT 625
+ T
Sbjct: 329 ICT 331
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 135 bits (327), Expect = 8e-31
Identities = 73/174 (41%), Positives = 97/174 (55%), Gaps = 1/174 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P +S +H G S+ + F+LHL+G+SS + +LPLFV +V
Sbjct: 147 YPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSV 206
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 391
ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+
Sbjct: 207 LITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIV 266
Query: 392 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTR 553
P FG++S I+ Q KK F F V +HH+FTVG+D D R
Sbjct: 267 PVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFTVGLDADKR 319
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 134 bits (323), Expect = 2e-30
Identities = 76/180 (42%), Positives = 101/180 (56%)
Frame = +2
Query: 89 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 268
FSLHLAGI+S + L LF ++ + + A IT
Sbjct: 134 FSLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCWSIVLVSLLLVLSLPVLAVGIT 191
Query: 269 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 448
++LTD++L T F+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S I Q
Sbjct: 192 LILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSI-QLSSLHRI 250
Query: 449 FXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 628
+V AHH++T G+DIDTR+YFT+AT+IIAVPTGIKIF L+++
Sbjct: 251 PGELSLVLAMASIALIGSVVWAHHMYTAGLDIDTRSYFTAATMIIAVPTGIKIFTWLSSL 310
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 132 bits (319), Expect = 7e-30
Identities = 64/95 (67%), Positives = 72/95 (75%)
Frame = +2
Query: 371 EVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDT 550
EVYILILPGFG+ISHIISQE GKKE F F+V AHH+FTVG+D+DT
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDT 214
Query: 551 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 655
RAYFTSAT+IIAVPTGIK+F LAT HGTQI Y+P
Sbjct: 215 RAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSP 249
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 130 bits (314), Expect = 3e-29
Identities = 57/81 (70%), Positives = 62/81 (76%)
Frame = +1
Query: 286 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRN 465
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 466 NLCYTSNWVIRIYCLSSSYIH 528
NLCY SNW+I IYCLSSSYI+
Sbjct: 67 NLCYISNWIISIYCLSSSYIY 87
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2
Query: 557 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 658
YFTSAT+IIAVPTGIKIF LAT HGTQINY+P+
Sbjct: 97 YFTSATMIIAVPTGIKIFSWLATFHGTQINYSPS 130
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 130 bits (314), Expect = 3e-29
Identities = 60/99 (60%), Positives = 73/99 (73%)
Frame = +2
Query: 356 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 535
FFGHPEVYILILPGFG+ISHI++ GKKE F FIV AHH+FTVG
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVG 61
Query: 536 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN 652
+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I ++
Sbjct: 62 MDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWD 100
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 120 bits (288), Expect = 4e-26
Identities = 65/172 (37%), Positives = 96/172 (55%)
Frame = +2
Query: 95 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITIL 274
+H+ GISS +F + ++ ++ +T+ AIT L
Sbjct: 162 VHVLGISSTIGSVNYITTNKYNRHVGLTFMNINIYNFSIIVTSILLIGSLPILGVAITGL 221
Query: 275 LTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFX 454
L DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S I++ K+ F
Sbjct: 222 LLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTSLILTSII-HKDIFG 278
Query: 455 XXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 610
+ V AHH+FTVG+DID+R+YF+ AT II++PT +K+F
Sbjct: 279 REGMMYCIISIGVVGYFVWAHHMFTVGLDIDSRSYFSIATSIISIPTSVKMF 330
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 120 bits (288), Expect = 4e-26
Identities = 73/204 (35%), Positives = 97/204 (47%)
Frame = +2
Query: 41 PTSSNIAHRGRSVICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 220
P S ++ + + SL L G SS +PLF A+ T
Sbjct: 143 PPLSLLSGKWGEELWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWAMLAT 202
Query: 221 AFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGF 400
+ A A+ +L D TSFF+P GGGDP++YQHLF F+ HP VYI+ILP F
Sbjct: 203 SSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFF 262
Query: 401 GIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATII 580
G+IS +I +K F IV AHH+FT G R +F + T++
Sbjct: 263 GVISEVI-PVHARKPIFGYRAIAYSSLAISFLGLIVWAHHMFTSGTPGWLRMFFMATTML 321
Query: 581 IAVPTGIKIFR*LATIHGTQINYN 652
IAVPTGIKIF T+ G +I N
Sbjct: 322 IAVPTGIKIFSWCGTLWGGKIQLN 345
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 118 bits (285), Expect = 9e-26
Identities = 62/159 (38%), Positives = 89/159 (55%)
Frame = +2
Query: 176 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 355
S ++PLFV + + A A+ +LL DR L ++FFDP GG +L+QH F
Sbjct: 196 SLQRVPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFW 255
Query: 356 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 535
FGHPEVYILILPGFG+IS +I +K + + V AHH+F VG
Sbjct: 256 IFGHPEVYILILPGFGMISEVI-PVFSRKPIYGYTFVAASSVAIVLLGYGVWAHHMFAVG 314
Query: 536 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN 652
+ + +F +++IA+PTGIK+F AT+ G +I +N
Sbjct: 315 LGMYADIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFN 353
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 117 bits (281), Expect = 3e-25
Identities = 66/157 (42%), Positives = 87/157 (55%)
Frame = +2
Query: 176 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 355
+ +++PLFV + AF A LL DR+ T FF P GGD +L+QHLF
Sbjct: 195 TLNRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFW 254
Query: 356 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 535
FFGHPEVYILILP GIIS ++ +K F F+V AHH+F VG
Sbjct: 255 FFGHPEVYILILPTMGIISEVL-PTFSRKPIFGYAFVAYSGVAIGFLGFLVWAHHMFAVG 313
Query: 536 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 646
+ A+F +A+ +IAVPTG+KIF LAT+ +N
Sbjct: 314 LGPLANAFFGAASFLIAVPTGVKIFNWLATMWQGSLN 350
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 112 bits (269), Expect = 8e-24
Identities = 59/158 (37%), Positives = 83/158 (52%)
Frame = +2
Query: 176 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 355
++ +LPLF + + + +++ DR T+FF+P GG+ ++++HLF
Sbjct: 186 TYMRLPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFW 245
Query: 356 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 535
FGHPEVYILILP FGI S +I +K F F+V HH+FT G
Sbjct: 246 IFGHPEVYILILPAFGIFSEVI-PVFARKRLFGYSSMVFAIVLIGFLGFMVWVHHMFTTG 304
Query: 536 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 649
+ A F AT+ IA+PTGIKIF L TI G + Y
Sbjct: 305 LGPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVKY 342
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 111 bits (268), Expect = 1e-23
Identities = 64/194 (32%), Positives = 95/194 (48%)
Frame = +2
Query: 68 GRSVICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 247
G + + F +HL G SS +F + LFV +
Sbjct: 97 GVTALYVFVMHLLGASSIATAVNFLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVP 156
Query: 248 XXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQ 427
AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S II
Sbjct: 157 SLAGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII-P 215
Query: 428 ERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKI 607
++ F F + HH+F G+ TR F+ T++IAVPTGIKI
Sbjct: 216 VFARRPLFGYTSMVFAVWAITAVSFFLWIHHMFVSGVPNWTRVLFSYTTLLIAVPTGIKI 275
Query: 608 FR*LATIHGTQINY 649
F + T++ I++
Sbjct: 276 FNWMLTLYRGAIHF 289
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 111 bits (267), Expect = 1e-23
Identities = 59/110 (53%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Frame = +2
Query: 41 PTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 217
P S+NIAH G SV + FSLH+AG+ S + ++PLFV AV I
Sbjct: 50 PLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEI 109
Query: 218 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 367
TA AGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 110 TAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 110 bits (265), Expect = 3e-23
Identities = 59/151 (39%), Positives = 88/151 (58%)
Frame = +2
Query: 176 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 355
S D++PLFV ++ +T+F A T L+ DR + T FF+PA GGD +L+QHLF
Sbjct: 193 SLDRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFW 252
Query: 356 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 535
FFGHPEVYI+ LP G++S I++ ++ F F + HH+F G
Sbjct: 253 FFGHPEVYIIFLPAVGMVSSIVATFT-QRPVFGYLAMVMALIATGVLAFGLWVHHMFVAG 311
Query: 536 IDIDTRAYFTSATIIIAVPTGIKIFR*LATI 628
+ ++FT++++ IAVP G++IF LATI
Sbjct: 312 LPRLGESFFTASSMAIAVPAGLQIFCWLATI 342
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 109 bits (262), Expect = 6e-23
Identities = 60/155 (38%), Positives = 83/155 (53%)
Frame = +2
Query: 185 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 364
++P+FV +T+ A+ +L+ DR +FF+ GG + YQHLF FG
Sbjct: 200 KMPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFG 259
Query: 365 HPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDI 544
HPEVYILILP GIIS +I +K F F V +HH+FTVG+
Sbjct: 260 HPEVYILILPAMGIISEVI-PVHARKMLFGYSVMVFSTALIGFMGFTVWSHHMFTVGMGP 318
Query: 545 DTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 649
+ F+ T+ IAVPTG+KIF L+T+ G QI +
Sbjct: 319 VVNSIFSLTTMAIAVPTGVKIFNWLSTMWGGQIRF 353
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 107 bits (258), Expect = 2e-22
Identities = 64/198 (32%), Positives = 97/198 (48%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSVICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 214
+TP S ++ ++ LHL G+S+ + L +F +
Sbjct: 186 YTPLSLQMSSPAVDMMM-LGLHLTGVSATMGAINFIATIFTERGEDVGWPDLDIFSWTML 244
Query: 215 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 394
+ A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP
Sbjct: 245 TQSGLILFAFPLFGSALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLP 303
Query: 395 GFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSAT 574
GI+S I+ + G+K F F V AHH+FT GID R+ F + +
Sbjct: 304 PMGIVSLILPKFSGRK-LFGFKFVVYSTLAIGVLSFGVWAHHMFTTGIDPRIRSSFMAVS 362
Query: 575 IIIAVPTGIKIFR*LATI 628
+ I++P+ +K+F + T+
Sbjct: 363 LAISIPSAVKVFNWITTM 380
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 106 bits (254), Expect = 5e-22
Identities = 62/137 (45%), Positives = 76/137 (55%), Gaps = 1/137 (0%)
Frame = +2
Query: 32 QFTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 208
++ P S +H G SV + F+LHL+G+SS +L LF A
Sbjct: 161 KYPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLALFGWA 220
Query: 209 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 388
+ IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI
Sbjct: 221 TWSSRSRYFL-------GITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILI 273
Query: 389 LPGFGIISHIISQERGK 439
+PGFGIIS IS K
Sbjct: 274 IPGFGIISTTISSSSNK 290
Score = 73.3 bits (172), Expect = 5e-12
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = +2
Query: 515 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 655
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I P
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTP 395
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 105 bits (253), Expect = 7e-22
Identities = 61/184 (33%), Positives = 82/184 (44%)
Frame = +2
Query: 101 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 280
L+GISS F ++P+FV G +LL
Sbjct: 178 LSGISSIMGAINFVTTIIRMRAPGMGFFRMPVFVWTAWAAQTIQLIGLPALTGGAVMLLF 237
Query: 281 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 460
D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S + +K F
Sbjct: 238 DLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSELF-PVYARKPLFGYR 296
Query: 461 XXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ 640
IV AHH+F G R F T++IA+PTG+K+F L T+
Sbjct: 297 FVAIASFGITFLSLIVWAHHMFYTGTPNWMRHIFMFTTMLIAIPTGVKVFAWLGTLWAGN 356
Query: 641 INYN 652
+ N
Sbjct: 357 LRLN 360
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 105 bits (252), Expect = 9e-22
Identities = 55/135 (40%), Positives = 78/135 (57%), Gaps = 5/135 (3%)
Frame = +2
Query: 254 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 418
AGAI +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G++S +
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEV 267
Query: 419 ISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 598
I Q ++ + F V HH+FT D R AT+ +A+P+G
Sbjct: 268 I-QRMARRRAYGYTAIAISSVAIASISFAVWMHHMFTAVQDFAPRVAMAIATMAVAIPSG 326
Query: 599 IKIFR*LATIHGTQI 643
+K+F +AT++G +I
Sbjct: 327 VKVFNWVATLYGGRI 341
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 105 bits (252), Expect = 9e-22
Identities = 64/178 (35%), Positives = 89/178 (50%)
Frame = +2
Query: 95 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITIL 274
LHL+G+S+ S+ L +F + + AI +L
Sbjct: 237 LHLSGVSATMGSINFIATIFTERGKNVSWANLDIFSWTILTQSGLILFAFPLLGSAIMML 296
Query: 275 LTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFX 454
L DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+I+ + G++ F
Sbjct: 297 LFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGRR-LFG 353
Query: 455 XXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 628
F V AHH+F G+D RA F + ++ IAVP+ +K F + T+
Sbjct: 354 FKFVVYSTLAIGVLSFGVWAHHMFATGLDPRLRASFMAVSLAIAVPSAVKTFNWITTM 411
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 102 bits (245), Expect = 7e-21
Identities = 52/131 (39%), Positives = 77/131 (58%)
Frame = +2
Query: 257 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 436
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S G
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAG 308
Query: 437 KKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR* 616
K+ F F+V HH FT+G + A+F AT+II++PTG+K+F
Sbjct: 309 KR-LFGHKSMIYASGAISVLGFMVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKLFNW 367
Query: 617 LATIHGTQINY 649
L TI+ ++ +
Sbjct: 368 LFTIYKGRLRF 378
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 102 bits (245), Expect = 7e-21
Identities = 66/217 (30%), Positives = 97/217 (44%), Gaps = 1/217 (0%)
Frame = +2
Query: 2 IPGCRNRHEGQFTPTSSNIAHRGRSVICYF-SLHLAGISSXXXXXXXXXXXXXXXXXXXS 178
I G N + P +SN G Y L +AGI + +
Sbjct: 158 IGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAGIGTLMTGINFMVTILKMRTKGMT 217
Query: 179 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 358
++P+F IT A+ +L DR FF GG P+L+ +LF
Sbjct: 218 LMRMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWI 277
Query: 359 FGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGI 538
+GHPEVYI+ILP FGI S IIS +K+ F F+V HH FT+G
Sbjct: 278 WGHPEVYIVILPAFGIFSEIIS-SFARKQLFGYKAMVGSIIAISVLSFLVWTHHFFTMGN 336
Query: 539 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 649
++F+ T+ I++PTG+KIF L T++ +I++
Sbjct: 337 SASVNSFFSITTMAISIPTGVKIFNWLFTMYKGRISF 373
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 102 bits (244), Expect = 9e-21
Identities = 64/198 (32%), Positives = 92/198 (46%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSVICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 214
+ P S+++++ G I F L AGI+S D++ ++
Sbjct: 137 YPPLSTSLSNVGIDFII-FGLLAAGIASTLSSVNFITTFTSVKTIGFVIDRISPAAWSIV 195
Query: 215 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 394
+T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+ILP
Sbjct: 196 LTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMILP 255
Query: 395 GFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSAT 574
GFGIIS ++S KE F + YFT+ T
Sbjct: 256 GFGIISLLLSTYT-TKEMFGNQTMILAMGFNSFVRLFGLGTSYVHIRFGSRYSRYFTTVT 314
Query: 575 IIIAVPTGIKIFR*LATI 628
I+IA+PTG KIF + T+
Sbjct: 315 ILIALPTGNKIFNWVTTL 332
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 101 bits (242), Expect = 2e-20
Identities = 55/107 (51%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P S N AH G SV + FSLHLAG+SS + + LFV +V
Sbjct: 112 YPPLSGNTAHAGPSVDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMKIELVSLFVWSV 171
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 352
ITA AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 172 KITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 101 bits (242), Expect = 2e-20
Identities = 56/111 (50%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P +S AH G SV + FSLHLAG+SS + ++PLFV +V
Sbjct: 130 YPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSV 189
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 364
ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 190 LITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 70.5 bits (165), Expect = 3e-11
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = +2
Query: 500 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 646
FIV A H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT+ G+ N
Sbjct: 250 FIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGSGRN 298
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 99 bits (238), Expect = 5e-20
Identities = 63/170 (37%), Positives = 86/170 (50%), Gaps = 10/170 (5%)
Frame = +2
Query: 176 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GG 325
SF +LPL + A ITA A +L+ DR+L TSFF AG GG
Sbjct: 229 SFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGG 288
Query: 326 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 505
P+L+QHLF F GHPEVYI+++P GI S +I+ +K F FI
Sbjct: 289 SPVLFQHLFWFLGHPEVYIVLIPALGITSEVIA-TNARKPIFGYKAMIGSILGIAVLSFI 347
Query: 506 V*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 655
V AHH+F G++ + F T+IIAVP+ +K F + T+ I + P
Sbjct: 348 VWAHHMFVTGMNPFLGSVFMFLTLIIAVPSAVKSFNYITTLWRGNIIFTP 397
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 99.5 bits (237), Expect = 6e-20
Identities = 56/133 (42%), Positives = 75/133 (56%), Gaps = 11/133 (8%)
Frame = +2
Query: 269 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 418
+LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDL 297
Query: 419 ISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 598
IS +K F F+V AHH++ G+ +F + T+IIA+PT
Sbjct: 298 IS-THARKNIFGYRMMVWAIVAIGALSFVVWAHHMYVSGMYPYFGFFFATTTLIIAIPTA 356
Query: 599 IKIFR*LATI-HG 634
IK++ + T+ HG
Sbjct: 357 IKVYNWVLTLWHG 369
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 98.7 bits (235), Expect = 1e-19
Identities = 53/107 (49%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P S +H G SV + FSLHL+GISS + +LPLFV A+
Sbjct: 129 YPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAI 188
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 352
+TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 189 FVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 97.9 bits (233), Expect = 2e-19
Identities = 55/155 (35%), Positives = 85/155 (54%)
Frame = +2
Query: 176 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 355
S +++P+FV AV + +F A +L DR FF A GDPIL+QHLF
Sbjct: 200 SLNRMPIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFW 258
Query: 356 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 535
FFGHPEVYI+ +P G++S II ++ F F + HH+FT G
Sbjct: 259 FFGHPEVYIIFIPALGMVSSIIITFT-QRPIFGYIPIVLSIVAIGFIGFGLWVHHMFTAG 317
Query: 536 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ 640
+ +FT+++ +IA+P+G++IF +AT+ G++
Sbjct: 318 LPQLGSNFFTASSAMIAIPSGVQIFCWIATLWGSK 352
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 96.7 bits (230), Expect = 4e-19
Identities = 49/130 (37%), Positives = 72/130 (55%)
Frame = +2
Query: 260 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 439
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S + S GK
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGK 308
Query: 440 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 619
+ F F V HH FT+G +F AT++I++PTG+K+F L
Sbjct: 309 R-LFGHHSMIYASGAIAVLGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWL 367
Query: 620 ATIHGTQINY 649
TI+ ++ +
Sbjct: 368 FTIYQGRLRF 377
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 95.9 bits (228), Expect = 8e-19
Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 4/194 (2%)
Frame = +2
Query: 38 TPTSSNIAHRG--RSVICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ--LPLFV* 205
TP SSNI + G I S+ AGIS+ + +P
Sbjct: 288 TPFSSNIKYTGVGSQDILILSVVFAGISTTISFTNLLITRRTLAMPGMRHRRVLMPFVTI 347
Query: 206 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 385
++ +T A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+L
Sbjct: 348 SIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVL 407
Query: 386 ILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFT 565
I+P FG I+ I+ ++ ++V HH++ VG+D +R ++
Sbjct: 408 IIPTFGFINMIVPHNNTRR-VASKHHMIWAIYVMAYMGYLVWGHHMYLVGLDHRSRTMYS 466
Query: 566 SATIIIAVPTGIKI 607
+ TI+I++P IK+
Sbjct: 467 TITIMISMPATIKV 480
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 95.1 bits (226), Expect = 1e-18
Identities = 57/166 (34%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Frame = +2
Query: 185 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDP 331
+LPL + A+ ITA A ++L DR + T FF P AGGG P
Sbjct: 218 RLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQP 277
Query: 332 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 511
+L+QHLF F+ HP VYI+ILP G++S I++ +K F FIV
Sbjct: 278 LLWQHLFWFYSHPAVYIMILPAMGMVSDILAC-FSRKPIFGYKPMVYSICGIAGLGFIVW 336
Query: 512 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 649
HH+F G++ F AT++IA+P+ +K F L T++G ++ +
Sbjct: 337 GHHMFVSGMNPGLGMTFMVATMMIALPSAVKTFNWLGTVYGGKVQF 382
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 95.1 bits (226), Expect = 1e-18
Identities = 49/153 (32%), Positives = 81/153 (52%)
Frame = +2
Query: 185 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 364
++P++V +V + A ++L +R + S+F+PA GGDP+L+Q F F+
Sbjct: 190 KMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYS 249
Query: 365 HPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDI 544
HP VY+++LP GI++ + S +K F +V AHH+FTVG
Sbjct: 250 HPTVYVMLLPYLGILAEVAS-TFARKPLFGYRQMVWAQMGIVVLGTMVWAHHMFTVGEST 308
Query: 545 DTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI 643
+ F T +IAVPTG+K+F + T+ G ++
Sbjct: 309 LFQIAFAFFTALIAVPTGVKLFNIIGTLWGGKL 341
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 94.7 bits (225), Expect = 2e-18
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 1/206 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSVICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 214
+TP S++ V+ F + G SS ++ ++PLFV A+
Sbjct: 158 YTPYSAHTTTTVAPVL--FGAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVWAIY 215
Query: 215 ITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 391
T+ G + +L+T NL FDPA GGDP+L+QHLF F+ HP VYI++L
Sbjct: 216 ATS-CIQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVL 274
Query: 392 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 571
P FG++S +++ +K F F HH+F G F
Sbjct: 275 PSFGVMSEVVA-TYSRKNIFGYRAVAYSSLGIAFVGFFAWGHHMFVSGQSTFAGGLFGVL 333
Query: 572 TIIIAVPTGIKIFR*LATIHGTQINY 649
T+I+ V T IK+F + T++ + +
Sbjct: 334 TMIVGVFTAIKVFNWVGTVYKGAVEF 359
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 94.7 bits (225), Expect = 2e-18
Identities = 54/100 (54%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Frame = -3
Query: 351 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDI 172
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVI 59
Query: 171 LFNRXXXXXXXXXXXXXIDEIPAKCSEK*QI-TDLPLCAI 55
+R I+E PAKC+EK + TD P CAI
Sbjct: 60 PADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAI 99
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 93.9 bits (223), Expect = 3e-18
Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 1/156 (0%)
Frame = +2
Query: 185 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 364
++PLFV TA + +R T FFD A GG P+L+Q LF FFG
Sbjct: 178 KMPLFVWGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFG 237
Query: 365 HPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI-V*AHHIFTVGID 541
HPEVYILILP G++S ++ + ++E F + V HH+FT +
Sbjct: 238 HPEVYILILPAMGLVSELL-PKMARREIFGYTAIALSSIAIAFLSALGVWMHHMFTAIDN 296
Query: 542 IDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 649
+ ++ T+ IA+P+G+K+ AT++G +I Y
Sbjct: 297 TLVQIVSSATTMAIAIPSGVKVLNWTATLYGGEIRY 332
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 93.1 bits (221), Expect = 5e-18
Identities = 51/151 (33%), Positives = 79/151 (52%)
Frame = +2
Query: 176 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 355
S ++P+F A+ I A A +L +R+ FF GGDP+L+QHLF
Sbjct: 203 SLTRMPIFAWAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFW 262
Query: 356 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 535
FFGHPEVYI+ LP G++S I+ + F + HH+FT G
Sbjct: 263 FFGHPEVYIIFLPAAGLVSMIV-PTMARHPLVGYRLIVVALIGTGFFSFGLWVHHMFTTG 321
Query: 536 IDIDTRAYFTSATIIIAVPTGIKIFR*LATI 628
I + +F++A++ +A+P+GI++F +ATI
Sbjct: 322 IPSLSLGFFSAASMAVAIPSGIQVFSWIATI 352
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 93.1 bits (221), Expect = 5e-18
Identities = 52/151 (34%), Positives = 81/151 (53%)
Frame = +2
Query: 176 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 355
S ++P+ + + TAF +L +R L FFD GGDP+L+QHLF
Sbjct: 219 SLTKMPILMWYLLATAFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFW 278
Query: 356 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 535
FGHPEVYI+ LP G+++ ++ G K F F + AHH+F G
Sbjct: 279 LFGHPEVYIIFLPAAGMVATMLPTFVG-KPLFGYGFAVAAVVTMSFLSFGLWAHHMFATG 337
Query: 536 IDIDTRAYFTSATIIIAVPTGIKIFR*LATI 628
+ I + + F++A+ ++AVPTG++IF +AT+
Sbjct: 338 LPILSLSLFSAASTMVAVPTGVQIFCFIATL 368
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 93.1 bits (221), Expect = 5e-18
Identities = 52/120 (43%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P SS AH G SV + F+LHL ISS + +LPLFV ++
Sbjct: 130 YPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSI 189
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 391
ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG I++L
Sbjct: 190 FITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 91.5 bits (217), Expect = 2e-17
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Frame = +2
Query: 185 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF*FF 361
++P+F ++ T +LL DRNL T FF +PAGG +L+ HLF FF
Sbjct: 189 KMPMFTWSILFTVILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFF 246
Query: 362 GHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGID 541
GHPEVYIL+ P G ++ +IS G K + F+V HH+F G +
Sbjct: 247 GHPEVYILLFPALGAMADVISTFSG-KPIYAKRYILTAFLIATIISFVVWMHHMFITGTN 305
Query: 542 IDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 649
I TR +++ TI+I++P + + + T++ ++ Y
Sbjct: 306 IYTRLFYSITTILISIPFEMAVMSFIFTLYKGRLVY 341
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 90.6 bits (215), Expect = 3e-17
Identities = 50/119 (42%), Positives = 66/119 (55%)
Frame = +2
Query: 272 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 451
+ DR L+T F+ GG +LY +L +GHPEVYILILP FGI S IIS K F
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIISY-ICVKSVF 306
Query: 452 XXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 628
F+V HH FT+G + +F+ +T+IIA+PTG+KIF + TI
Sbjct: 307 SYISLIYATISITVLSFLVWLHHFFTMGSGYLSNIFFSISTMIIAIPTGVKIFNWIFTI 365
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 89.0 bits (211), Expect = 9e-17
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 6/212 (2%)
Frame = +2
Query: 35 FTPTSSNIAHRGRS-VICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+TP S+N+ G + ++ + G+SS ++ +LPL + +
Sbjct: 162 YTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRLPLTIWGL 221
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEV 376
+TA A +LL DR+ T FF GGGDPIL+QHLF FGHPEV
Sbjct: 222 WLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEV 281
Query: 377 YILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRA 556
YI+ILP +GI+ ++S +K +V HH+F G+
Sbjct: 282 YIMILPAWGILGDVLS-FFARKPHHWYRGTVWAMVLVTVLSAMVYGHHMFMTGMSPLLGE 340
Query: 557 YFTSATIIIAVPTGIKIFR*LATIHGTQINYN 652
F T++I++P+ + + + T+ + Y+
Sbjct: 341 GFMLFTLLISIPSMVVVVNWVLTLWQGSLRYD 372
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 89.0 bits (211), Expect = 9e-17
Identities = 46/132 (34%), Positives = 70/132 (53%)
Frame = +2
Query: 260 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 439
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II +
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII-PTFAE 326
Query: 440 KETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*L 619
K F + V HH FT+G +F++AT+++ +PTG+K+F
Sbjct: 327 KPLFGYATMVIATFAIGGISWGVWLHHFFTMGAGPGINIFFSTATMLVGIPTGVKVFNWA 386
Query: 620 ATIHGTQINYNP 655
T+ ++ + P
Sbjct: 387 LTLWRGRLRFEP 398
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 88.6 bits (210), Expect = 1e-16
Identities = 49/153 (32%), Positives = 75/153 (49%)
Frame = +2
Query: 185 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 364
++P+F ++ T+ A + + L S F+P GG P+LYQ F F+
Sbjct: 198 KMPVFAWSIFATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYS 257
Query: 365 HPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDI 544
HP VY+++LP GI + + S +K F IV HH+F VGI
Sbjct: 258 HPAVYVMLLPYLGIGAEVAS-TMARKPLFGYRVMVYSMLAIVLVSCIVWLHHMFAVGIPE 316
Query: 545 DTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI 643
+ F +T+I+AVPTG+KIF + T+ G +I
Sbjct: 317 AWQIAFMISTLIVAVPTGVKIFNLIGTLWGGRI 349
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 88.6 bits (210), Expect = 1e-16
Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 1/199 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSVICY-FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P +S G ++ Y + L GIS+ S D+LP+ V
Sbjct: 165 YVPLTSLDYSAGANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGT 224
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 391
+ + A +L DRN T FFD A GG P+L+QHLF F HP VY+++L
Sbjct: 225 LTASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVL 284
Query: 392 PGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSA 571
P GI+S + ++ F V HH+F GI A+F +A
Sbjct: 285 PAMGIVSDAL-PTFCRRPLVAYEAVAVSTVATMLIGFEVWVHHMFATGIAPLALAFFGAA 343
Query: 572 TIIIAVPTGIKIFR*LATI 628
+++I++P+ + +F +ATI
Sbjct: 344 SMLISIPSAVAVFAWIATI 362
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 88.6 bits (210), Expect = 1e-16
Identities = 52/148 (35%), Positives = 74/148 (50%)
Frame = +2
Query: 185 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 364
++P+F + + + A +L DR L +DPA GG +L+QHLF FFG
Sbjct: 206 RMPIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFG 264
Query: 365 HPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDI 544
HPEVY+L LP FGI+S II +K F V AHH+F G +
Sbjct: 265 HPEVYVLALPFFGIVSEII-PVFSRKPMFGYVGLIFATLSIGALSMAVWAHHMFVTGAVL 323
Query: 545 DTRAYFTSATIIIAVPTGIKIFR*LATI 628
+F+ T +I+VPTG+K F + T+
Sbjct: 324 --LPFFSFMTFLISVPTGVKFFNWVGTM 349
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 87.4 bits (207), Expect = 3e-16
Identities = 48/111 (43%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P +S AH G SV + F+LH+ ISS + +LPLFV A+
Sbjct: 130 YPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAI 189
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 364
ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 190 LITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 87.0 bits (206), Expect = 4e-16
Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P +S +H G S+ + F+LHL+G+SS + +LPLFV +V
Sbjct: 147 YPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSV 206
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH--PEVYIL 385
ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG P + I+
Sbjct: 207 LITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIWPIIIII 266
Query: 386 IL 391
I+
Sbjct: 267 II 268
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 87.0 bits (206), Expect = 4e-16
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 1/206 (0%)
Frame = +2
Query: 38 TPTSSNIAHRGRSVICY-FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 214
TP S I+ G + + F L + GISS S Q+PL +
Sbjct: 132 TPPYSVISAPGPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYL 191
Query: 215 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 394
++ A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P
Sbjct: 192 SSSLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIP 251
Query: 395 GFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSAT 574
G++ ++ + +K + F AHH+F G+ + F T
Sbjct: 252 AIGMMYEMVPR-FSRKPIYSYNSGLFAFVLLTIVGFSSWAHHMFATGMSFTEKTVFMLGT 310
Query: 575 IIIAVPTGIKIFR*LATIHGTQINYN 652
+ + + +F +AT+ +I ++
Sbjct: 311 LAAVPASAMHVFNFVATMWNGRIRFD 336
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 86.6 bits (205), Expect = 5e-16
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 11/170 (6%)
Frame = +2
Query: 176 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG-----------G 322
+F +LP+ + + ITA + + DR T FF P+G G
Sbjct: 218 TFFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVINNAAPTVGG 277
Query: 323 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 502
G P+L+QHLF F+ HP VYI++LP G++S ++S +K F F
Sbjct: 278 GQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLSC-MCRKPLFGYKPMVFSMSAIASLGF 336
Query: 503 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN 652
IV HH+FT G++ F +T++IA+P+ IK F ATI G ++ +N
Sbjct: 337 IVWGHHMFTSGMNPAVGMAFMVSTMMIALPSAIKTFNWTATIWGGKLEFN 386
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 85.0 bits (201), Expect = 1e-15
Identities = 47/147 (31%), Positives = 76/147 (51%)
Frame = +2
Query: 185 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 364
++P+F A+ + A A +L +R + FF GGDP+L+QHLF FFG
Sbjct: 265 RMPVFAWAMLVFALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFG 324
Query: 365 HPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDI 544
HPEVYI+ LP G++S I+ + F + HH+FT GI
Sbjct: 325 HPEVYIIFLPAAGMVSMIV-PTMARTPLVGYRFVVLALVGTAFLSFGLWVHHMFTTGIPQ 383
Query: 545 DTRAYFTSATIIIAVPTGIKIFR*LAT 625
+ ++F +A+ +A+P+G+++F +AT
Sbjct: 384 LSLSFFQAASTAVAIPSGMQVFAWIAT 410
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 85.0 bits (201), Expect = 1e-15
Identities = 40/93 (43%), Positives = 52/93 (55%)
Frame = +2
Query: 356 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 535
FFGHPEVY+LILP FGI+SHI F +V AHH+F VG
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMVG 60
Query: 536 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 634
D+ T +F+S T++I +PTGIK+F L + G
Sbjct: 61 YDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 84.6 bits (200), Expect = 2e-15
Identities = 44/155 (28%), Positives = 71/155 (45%)
Frame = +2
Query: 185 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 364
+LPLFV ++ T+ ++ ++ + FDPA GGDP+L+QH F F+
Sbjct: 199 RLPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYS 258
Query: 365 HPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDI 544
HP VYI++LP +IS ++ +K F F HH+FT G
Sbjct: 259 HPAVYIMVLPAMAVISEVVC-AFSRKNIFGYKAVAYSSLGIAFVGFFTWGHHMFTSGQSA 317
Query: 545 DTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 649
F ++ + + T IK+F AT++ I +
Sbjct: 318 FNGGVFGVLSMFVGIFTAIKVFNWTATLYKGSIYF 352
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 83.8 bits (198), Expect = 3e-15
Identities = 46/120 (38%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P + +H G +V + FSLHL+G SS ++ +PLF AV
Sbjct: 135 YFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAV 194
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 391
TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 195 LFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 83.4 bits (197), Expect = 4e-15
Identities = 49/151 (32%), Positives = 73/151 (48%)
Frame = +2
Query: 176 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 355
S D++P++ +TA +L +R FF A GGD +L+QHLF
Sbjct: 193 SLDRMPIYGWYALVTATMILTGFPPLILGSILLELERAFGLPFFQVAEGGDSLLWQHLFW 252
Query: 356 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 535
FGHPEVYI+ LP G IS I+ + E F + HH+FT G
Sbjct: 253 LFGHPEVYIIFLPAAGAISTIL-PVMARTELIGYRWVVAAAISLAVLSFGLWVHHMFTTG 311
Query: 536 IDIDTRAYFTSATIIIAVPTGIKIFR*LATI 628
I A F++A+ ++AVPT +++F + T+
Sbjct: 312 IPHMGLALFSAASTLVAVPTAVQLFAWIGTL 342
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 83.0 bits (196), Expect = 6e-15
Identities = 52/155 (33%), Positives = 73/155 (47%)
Frame = +2
Query: 188 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 367
+PLF TA L DR L+ FF GG+ + + ++F FGH
Sbjct: 245 MPLFTWTALCTAIMMIFAMPPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGH 304
Query: 368 PEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDID 547
PEVYILILP FG+ S I S G K F F+V HH FT+G
Sbjct: 305 PEVYILILPAFGVYSEIFSTFSG-KVLFGYKSLVWATISIAFLSFLVWLHHFFTMGQSGH 363
Query: 548 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN 652
A F A+++I +PTG+KI+ + T+ +I ++
Sbjct: 364 INAVFGIASMLIGIPTGVKIYDWMWTMLRGRIRFS 398
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 83.0 bits (196), Expect = 6e-15
Identities = 40/116 (34%), Positives = 64/116 (55%)
Frame = +2
Query: 281 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXX 460
+R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+ ++
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV-PTAARQPIVGYS 312
Query: 461 XXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 628
F + HH+FT G+ + +F++A+ + +PTGI++F +AT+
Sbjct: 313 WIVLSAVGTGFLSFGLWVHHMFTTGLPALSLGFFSAASEAVVIPTGIQLFAFVATL 368
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 83.0 bits (196), Expect = 6e-15
Identities = 48/151 (31%), Positives = 73/151 (48%)
Frame = +2
Query: 176 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 355
S ++P+F +TA +L +R + FF A GGD +L+QHLF
Sbjct: 193 SLSKMPIFAWYALVTAVMILTGFPPLILGSILLELERAFDMPFFQAAAGGDALLWQHLFW 252
Query: 356 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 535
FGHPEVYI+ LP G IS I+ + F + HH+FT G
Sbjct: 253 LFGHPEVYIIFLPAAGAISTIL-PVMARTGLLGYGWIVAAAVALGVLSFGLWVHHMFTTG 311
Query: 536 IDIDTRAYFTSATIIIAVPTGIKIFR*LATI 628
I A+F++A+ ++AVPT +++F + T+
Sbjct: 312 IPHLGLAFFSAASTLVAVPTAVQLFIWIGTL 342
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 81.8 bits (193), Expect = 1e-14
Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Frame = +2
Query: 176 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG-----------G 322
S ++P+ A IT+ A +L DR TSFF P+G G
Sbjct: 214 SLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAGTSFFIPSGLVFNDHVIPHGG 273
Query: 323 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 502
G +L+QHLF FFGHPEVYI ILP GI+SHI+ ++ +
Sbjct: 274 GSALLWQHLFWFFGHPEVYIAILPAMGIVSHILINSM-RRPLLSHRVVIGSMISIGFLSY 332
Query: 503 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN 652
+V HH+F G++ + F+ T+II +P + L +++G+++ N
Sbjct: 333 VVWGHHMFVSGMNPLSSLVFSFPTLIITIPATVLTLIWLGSLYGSRLRIN 382
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 79.8 bits (188), Expect = 5e-14
Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P +S +H G S+ + F+LHL+G+SS + +LPLFV +V
Sbjct: 147 YPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSV 206
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 391
ITA A +T+LL DRN NTSFF +GGGDP+LY+H+ F+ +P V ILI
Sbjct: 207 LITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VLILIW 263
Query: 392 PGFGI 406
GI
Sbjct: 264 LTSGI 268
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 79.4 bits (187), Expect = 7e-14
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 1/204 (0%)
Frame = +2
Query: 41 PTSSNIAHRGRSVICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 220
P S I H G + FS+ L G +S +++L +FV A +
Sbjct: 133 PPYSIITH-GNTAFYTFSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVWAT-LA 190
Query: 221 AFXXXXXXXXXAG-AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 397
AF G A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP
Sbjct: 191 AFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPF 250
Query: 398 FGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATI 577
++ I++ + V HH++ G+ R T+
Sbjct: 251 MAMVFEIVATFARNRVFNYKMVVYGGIGGIVLLSGEVWIHHLYVTGMPDWLRVGQMVTTV 310
Query: 578 IIAVPTGIKIFR*LATIHGTQINY 649
+I++P G+ + + T++G I++
Sbjct: 311 LISIPVGLMVIGLVGTLYGGSISF 334
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 73.7 bits (173), Expect = 4e-12
Identities = 34/79 (43%), Positives = 50/79 (63%)
Frame = +2
Query: 374 VYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTR 553
VY++ILP FG++SH + + G + + V AHH+FTVG+D+DTR
Sbjct: 1 VYVIILPVFGLVSHSLHRG-GLFSLYNMLGMVYAMIAIAVVGYFVWAHHMFTVGLDVDTR 59
Query: 554 AYFTSATIIIAVPTGIKIF 610
YF+SAT++IA+PT IK+F
Sbjct: 60 VYFSSATLLIALPTSIKVF 78
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 73.7 bits (173), Expect = 4e-12
Identities = 33/40 (82%), Positives = 37/40 (92%)
Frame = +2
Query: 539 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 658
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P+
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPS 40
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 73.7 bits (173), Expect = 4e-12
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +1
Query: 343 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLS 513
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY S W I +S
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 72.5 bits (170), Expect = 8e-12
Identities = 44/94 (46%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P + N+AH G SV + FSLHLAGISS S Q PLFV AV
Sbjct: 118 YPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAV 177
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 313
ITA A IT+LLTDRNLNT+FFDP
Sbjct: 178 LITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 70.1 bits (164), Expect = 4e-11
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Frame = +2
Query: 188 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPI 334
+P+F ++ +T + A+ IL +D L T++F D G +
Sbjct: 192 IPIFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASL 251
Query: 335 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 514
L+ HLF FFGHPEVYI+ P G+++ G++ F+V
Sbjct: 252 LWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR-LVGRKWFIISMVLVALQSFVVWM 310
Query: 515 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 649
HH+F GI++ + F + TI I++P + +F + T+ ++ +
Sbjct: 311 HHMFLTGINLPIKTIFMATTIGISLPFDLMVFSLIYTMAKGRVRF 355
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 68.9 bits (161), Expect = 1e-10
Identities = 31/41 (75%), Positives = 37/41 (90%)
Frame = +2
Query: 536 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 658
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P+
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPS 41
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 59.7 bits (138), Expect = 6e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +1
Query: 199 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 366
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 59.3 bits (137), Expect = 8e-08
Identities = 43/149 (28%), Positives = 67/149 (44%)
Frame = +2
Query: 188 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 367
LPLFV AV A G +LL ++ S++ GG +++++LF +FGH
Sbjct: 211 LPLFVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGH 269
Query: 368 PEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDID 547
PEVY+L+LPG G + +S + + +V HH F GI
Sbjct: 270 PEVYLLLLPGTGAMFDYLS-NLNHRPPYLKKWMIAAMGAISVDSVMVFLHHTFMTGIVFA 328
Query: 548 TRAYFTSATIIIAVPTGIKIFR*LATIHG 634
+ T I++PT + I +AT+ G
Sbjct: 329 WLMADSIFTETISIPTSMLIVGLIATMIG 357
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 58.4 bits (135), Expect = 1e-07
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +2
Query: 182 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 361
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 362 GHPEVYILIL 391
GH +V LIL
Sbjct: 72 GHTDVLFLIL 81
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 58.4 bits (135), Expect = 1e-07
Identities = 35/84 (41%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +2
Query: 38 TPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 214
+P +S+IAH G SV + FSLHLAG+SS + D++PLF+ AV
Sbjct: 71 SPLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVF 130
Query: 215 ITAFXXXXXXXXXAGAITILLTDR 286
IT AGAIT+LLTDR
Sbjct: 131 ITTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 56.0 bits (129), Expect = 8e-07
Identities = 22/44 (50%), Positives = 34/44 (77%)
Frame = +2
Query: 515 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 646
HH+FTVG+D++T +F+S T+II VPTGIK+F L + +++N
Sbjct: 53 HHMFTVGLDVNTAVFFSSVTMIIRVPTGIKVFTWLYMLSNSRVN 96
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +2
Query: 512 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT 625
AHH+ TVG++ DTRAYF++ TI+IA+PTG KIF L T
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGT 39
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +2
Query: 521 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 610
++ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 53.2 bits (122), Expect = 5e-06
Identities = 25/42 (59%), Positives = 31/42 (73%)
Frame = +2
Query: 530 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 655
VG+ + RAYFTSAT+IIA+PTGIK F LAT G I ++P
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDP 337
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 51.2 bits (117), Expect = 2e-05
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +2
Query: 521 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGT 637
++T G+++DTRA+FTS TI+I++PTG K+F L T T
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMST 39
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 542 IDTRAYFTSATIIIAVPTGIKIFR*LAT 625
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 50.0 bits (114), Expect = 5e-05
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +2
Query: 503 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 610
+V HH+F VG D+ T +F+S T+II VPTGIK+F
Sbjct: 26 VVWLHHMFMVGFDVKTAVFFSSVTMIIGVPTGIKVF 61
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 48.0 bits (109), Expect = 2e-04
Identities = 34/118 (28%), Positives = 46/118 (38%)
Frame = +2
Query: 299 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXX 478
S F G P+ Y F F HPEVY+ ILP F I I+ K+ F
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL-PAAAKRPLFARGWAIAGL 369
Query: 479 XXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN 652
+ HH FT D F + T +++PTG + TI G ++ N
Sbjct: 370 VGVSMSGAMSGVHHYFTAVSDA-RMPIFMTITETVSIPTGFIYLSAIGTIWGGRLRIN 426
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +1
Query: 202 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 354
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 46.0 bits (104), Expect = 8e-04
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +1
Query: 343 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSSY 522
T ILI W S+Y F IW +F+ T FW+ N L + SNW I C+S +
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMSPPH 60
Query: 523 IH 528
+H
Sbjct: 61 VH 62
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +2
Query: 356 FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVG 535
FFGHP VY + P FG + + I K+ F ++ HH+ T
Sbjct: 2 FFGHPVVYYVPFPLFGALYYYI-PIYAKRSLFSEKWARWNIFLLAIGSMLIWVHHLQTFP 60
Query: 536 IDIDTRAYFTSATIIIAVPTGIKI 607
+ +D RA+ T +T+++A +G+ +
Sbjct: 61 LPVDLRAWITVSTLVLASGSGLTV 84
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 43.2 bits (97), Expect = 0.006
Identities = 29/92 (31%), Positives = 43/92 (46%)
Frame = +1
Query: 214 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFT 393
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 394 RIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNW 489
I ++ +K N ++NNL ++ W
Sbjct: 154 SIRNRITHLHNIFSQKSNILYYKNNLRHSIYW 185
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 42.7 bits (96), Expect = 0.008
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = -3
Query: 636 VPCIVASHLKILIPVGTAIIIVAEVKYARVSISIPTVNI**AQT 505
VP + +H K LIPVGT +I+V E+K V S PTVN+ AQT
Sbjct: 51 VPASMYNHEKTLIPVGTPMIMVTELKKTAVPKSSPTVNMWWAQT 94
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 42.7 bits (96), Expect = 0.008
Identities = 36/109 (33%), Positives = 44/109 (40%), Gaps = 1/109 (0%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P SS +AH +V + F LHLAGISS ++ LF
Sbjct: 119 YPPXSSGLAHSSGAVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXX 178
Query: 212 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 358
A AIT+L R N SFF P G P + F F
Sbjct: 179 VXXXXXLILSXPVLAAAITMLXXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 40.7 bits (91), Expect = 0.030
Identities = 25/92 (27%), Positives = 42/92 (45%)
Frame = +2
Query: 332 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 511
+L+ LF F+GHP VY + P FG + + I Q G + + V
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAG-RSLYSEKWARWNIYLLAIGTMGVW 282
Query: 512 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKI 607
HH+ T + I R + +T+I+A +G+ +
Sbjct: 283 VHHLQTWPLPIVLREWVNLSTLILATGSGLTV 314
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 37.9 bits (84), Expect = 0.21
Identities = 26/111 (23%), Positives = 43/111 (38%)
Frame = +2
Query: 320 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXX 499
G DPI Q F FGH VY+ +P G + +++ K +
Sbjct: 233 GLDPIANQIAFWIFGHAIVYMAWVPAVGAL-YLLIPMLANKPLYSDRMGRISALLYLIFS 291
Query: 500 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN 652
V HH++ V + I + T + +P+ + F AT G + +N
Sbjct: 292 NNVPIHHLYMVNLPIALKLLQEVLTYSVVIPSMMTFFNLWATAKGADVKWN 342
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 36.7 bits (81), Expect = 0.49
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +2
Query: 35 FTPTSSNIAHRGRSV-ICYFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 211
+ P S +H G SV + FSLHL+GISS + +LPLFV A+
Sbjct: 129 YPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAI 188
Query: 212 GITAFXXXXXXXXXAG 259
+TA AG
Sbjct: 189 FVTAILLLLSLPVLAG 204
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 320 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 436
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 35.1 bits (77), Expect = 1.5
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +2
Query: 176 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 298
+ D++ L ++ ITA AGAIT+LLTDRN+NT
Sbjct: 161 TMDKISLLSWSILITAVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 35.1 bits (77), Expect = 1.5
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Frame = +2
Query: 326 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 505
D +L + LF +FGHP VY +LP + + I + G F
Sbjct: 207 DVLLARTLFWWFGHPLVYFWLLPAVALWYYAIPRILG-VPLFSETMAKVAYILYMIASTP 265
Query: 506 V*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 628
V HH F GI + T T ++A P+ + F LAT+
Sbjct: 266 VGLHHQFVDPGIGPFFKLVHTLVTFVVATPSMLTAFNILATL 307
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 35.1 bits (77), Expect = 1.5
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +2
Query: 326 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 505
D + ++ F FFGHP VY ++P I I+ + G E F
Sbjct: 206 DVLEWRLWFWFFGHPLVYFWLVPAVTIWYTILPRVLG-TEVFSKTAAKAAFMLYLIASVP 264
Query: 506 V*AHHIFT-VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 628
V HH F G+ + T T ++AVP+ I F +AT+
Sbjct: 265 VGLHHQFVDPGVHPVYKYLHTVLTYLVAVPSFITAFNVIATL 306
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 2.0
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 368 PEVYILILPGFGIISHIISQERGKK 442
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +2
Query: 326 DPILYQHLF*FFGHPEVYILILPGFGIISHI---ISQERGK 439
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 8.0
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 285 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 163
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
>UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2;
Cryptosporidium|Rep: Cation-transporting ATPase -
Cryptosporidium parvum Iowa II
Length = 1434
Score = 32.7 bits (71), Expect = 8.0
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 346 FILIFWT--S*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSS 519
+I+ FW+ S SLYFN + N + T KK N L + +C+ + + S +
Sbjct: 558 YIIPFWSTSSMSLYFNNAIKYLNSEHILTTNPKKLNQLLLVDTICFDKTGTLTVPTFSIN 617
Query: 520 YIH 528
+H
Sbjct: 618 NVH 620
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 8.0
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -3
Query: 339 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 202
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,756,553
Number of Sequences: 1657284
Number of extensions: 7831460
Number of successful extensions: 20292
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 18639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20055
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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