Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0033
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    25   0.55 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   1.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   1.7  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   3.9  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   5.1  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   6.7  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   6.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.9  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -1

Query: 329 LFGCSVERILLVRRSYVIGHVFIFTAMAFRYKYV 228
           L   +V  ILLV  SY++ +VF F     RY  V
Sbjct: 256 LLWITVTFILLVGDSYIVMYVFFFHLSDVRYVMV 289


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -2

Query: 334 GNFLDAQWKEFFLFAGLMLLDMFSFSRRWRS-DTSTWITIE 215
           GN +    K+F++   L++  +F F + W +  TS+ +T E
Sbjct: 253 GNIIATYDKQFYIHNALIVRALFLFFQLWATVYTSSQVTRE 293


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -2

Query: 334 GNFLDAQWKEFFLFAGLMLLDMFSFSRRWRS-DTSTWITIE 215
           GN +    K+F++   L++  +F F + W +  TS+ +T E
Sbjct: 249 GNIIATYDKQFYIHNALIVRALFLFFQLWATVYTSSQVTRE 289


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 494 YQPENVYTIWWS 529
           Y+P  VY  WWS
Sbjct: 260 YRPYPVYNQWWS 271


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 488 VRCDDYGRSDVFSN 447
           +R DD+GR   FSN
Sbjct: 557 IRGDDFGRGQDFSN 570


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = -2

Query: 304 FFLFAGLMLLDMF-SFSRRWRSDTSTWITIE 215
           FF   G+M   +F + ++RW      W  ++
Sbjct: 90  FFFLTGVMASLLFLNLAKRWPKFVKDWCVVD 120


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = -2

Query: 304 FFLFAGLMLLDMF-SFSRRWRSDTSTWITIE 215
           FF   G+M   +F + ++RW      W  ++
Sbjct: 90  FFFLTGVMASLLFLNLAKRWPKFVKDWCVVD 120


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 215 LDCDPRTCI 241
           LDCDP  C+
Sbjct: 153 LDCDPTQCV 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,418
Number of Sequences: 336
Number of extensions: 3491
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)