Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0031
         (485 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    24   0.75 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    24   0.75 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   1.7  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   4.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.2  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   9.2  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.2 bits (50), Expect = 0.75
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +3

Query: 306 QIPLTDLPGTTVAAVSESDTTSWPGAV-AALDSLTVACEKDSMQVTITLAKRDP 464
           ++P   L G TV   S ++TT  PG +  + D+    C  ++      L  R P
Sbjct: 527 RMPRYCLFGNTVNLTSRTETTGEPGKINVSEDAYRYLCMPENQDSQFLLEYRGP 580


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.2 bits (50), Expect = 0.75
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +3

Query: 306 QIPLTDLPGTTVAAVSESDTTSWPGAV-AALDSLTVACEKDSMQVTITLAKRDP 464
           ++P   L G TV   S ++TT  PG +  + D+    C  ++      L  R P
Sbjct: 527 RMPRYCLFGNTVNLTSRTETTGEPGKINVSEDAYRYLCMPENQDSQFLLEYRGP 580


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
 Frame = +3

Query: 24  KRTLSKKKTNPKTSHNKISSS-VFPYTKQKTDTDYVYS 134
           KR  S     P T H K+    +FP      D +Y YS
Sbjct: 109 KRPASPGYVQPPTKHQKLDQKFIFPQENNYND-NYFYS 145


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -2

Query: 451 ASVMVTCMLSFSQATVRESRAATAPGHDVV 362
           A V++  +L+ +   +  +    APGHD +
Sbjct: 4   AIVLLLALLTLAAGEIAHNDPHFAPGHDAI 33


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 135 SCAQRNVVLVCKHCVSCVFMC 197
           S AQRNV+ +    V   F+C
Sbjct: 277 SAAQRNVIRMLVAVVVAFFIC 297


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -1

Query: 311 DLLGTRGREQRAYYQ*TP 258
           DLLG  G+    YY   P
Sbjct: 198 DLLGVPGKRNEIYYNCCP 215


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,481
Number of Sequences: 438
Number of extensions: 2771
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)