Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0028
(447 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1566 + 27909297-27909390,27909542-27909645,27912899-279130... 66 9e-12
07_03_0423 + 18035688-18036572,18036659-18036978,18052618-180527... 64 5e-11
09_06_0327 + 22359524-22359602,22359732-22359835,22362073-223622... 62 3e-10
08_02_0085 + 12108474-12108552,12108656-12108759,12109726-121099... 59 2e-09
04_03_0545 + 16996340-16996418,16998039-16998142,16999796-169999... 57 6e-09
04_03_0539 + 16892822-16892900,16894004-16894107,16894718-168949... 53 1e-07
04_03_0543 + 16955440-16955518,16956623-16956726,16957456-169576... 51 5e-07
07_03_0076 - 13123676-13123720,13124611-13124714,13124813-13124891 44 6e-05
03_02_0550 + 9407280-9407375,9407474-9407560,9408230-9408317,940... 30 0.74
03_06_0464 + 34126930-34127065,34127149-34127333,34127444-341276... 29 1.7
02_05_1360 + 35942493-35942682,35942799-35942858,35943099-359432... 29 2.3
06_03_0618 + 22798419-22798588,22798672-22798771,22798891-227989... 28 3.9
02_05_0701 + 31022485-31022648,31023569-31023611,31023712-310237... 28 3.9
12_02_0973 + 24959440-24959451,24959962-24962195,24962539-249626... 27 5.2
06_02_0338 - 14723277-14723444,14724564-14724836,14735044-147351... 27 5.2
03_02_0500 - 8915300-8915349,8915567-8915717,8916308-8916516,891... 27 6.9
03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484 27 9.1
>08_02_1566 +
27909297-27909390,27909542-27909645,27912899-27913098,
27913214-27913314,27913427-27914130,27914671-27914834,
27914941-27915100
Length = 508
Score = 66.5 bits (155), Expect = 9e-12
Identities = 35/98 (35%), Positives = 60/98 (61%), Gaps = 6/98 (6%)
Frame = +1
Query: 145 QTVREFYDGKSVFITGATGFLGKAYVEKLAYSCPGIVSIYILIRDKKGSNTEERMR-KYL 321
+ + E++ GKS+ ITGATGFLGK VEK+ P + IY+L+R ++ +R++ +
Sbjct: 9 ERIIEYFKGKSILITGATGFLGKILVEKILRVQPDVKKIYLLVRAIDQASANQRVQSEVT 68
Query: 322 DQPIFSRIKYEHPEYF-----KKIIPISGDITAPKLGL 420
+ +FS +K +H + F +K++ ++GDI LGL
Sbjct: 69 ETELFSVVKEKHGKGFSRFIEEKVVALAGDIIYDDLGL 106
>07_03_0423 +
18035688-18036572,18036659-18036978,18052618-18052724,
18053001-18053104,18054129-18054328,18054422-18054522,
18054695-18054841,18055007-18055166,18055287-18055368,
18056070-18056336,18056846-18056973,18057513-18057672
Length = 886
Score = 64.1 bits (149), Expect = 5e-11
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Frame = +1
Query: 106 SKMSHNGTLDEHYQTVREFYDGKSVFITGATGFLGKAYVEKLAYSCPGIVSIYILIRDKK 285
S+ S+ +D TV ++ KS+ ITG+TGFLGK +VEK+ P + I++L+R
Sbjct: 404 SEKSNESNMDA--ATVAGYFKDKSILITGSTGFLGKIFVEKILRIQPDVKKIFLLVRAAD 461
Query: 286 GSNTEER-MRKYLDQPIFSRIKYEHPEYF-----KKIIPISGDITAPKLGL 420
S+ E+R + + + +F ++ + F +KI P++GDI LGL
Sbjct: 462 TSSAEQRVLNEVIGNELFGPLRENYGSNFYSFMKEKISPLAGDIINENLGL 512
>09_06_0327 +
22359524-22359602,22359732-22359835,22362073-22362272,
22362359-22362459,22362551-22363005,22363079-22363645
Length = 501
Score = 61.7 bits (143), Expect = 3e-10
Identities = 31/94 (32%), Positives = 56/94 (59%), Gaps = 6/94 (6%)
Frame = +1
Query: 157 EFYDGKSVFITGATGFLGKAYVEKLAYSCPGIVSIYILIRDKKGSNTEERMR-KYLDQPI 333
E++ KS+ ITG+TGFLGK VEK+ P + IY+ +R + ++RM+ + + + +
Sbjct: 8 EYFKNKSILITGSTGFLGKILVEKILRVQPDVRKIYLPVRAVDAATAKQRMQTEVIGKEL 67
Query: 334 FSRIKYEHPEYF-----KKIIPISGDITAPKLGL 420
F +K +H + F +K++P++ D+ LGL
Sbjct: 68 FGLLKEQHGKGFQSFIDEKVVPLAADMMHQNLGL 101
>08_02_0085 +
12108474-12108552,12108656-12108759,12109726-12109925,
12110003-12110103,12110184-12110379,12110584-12110745,
12110856-12110937,12111741-12112004,12113047-12113174,
12113795-12113957
Length = 492
Score = 58.8 bits (136), Expect = 2e-09
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Frame = +1
Query: 160 FYDGKSVFITGATGFLGKAYVEKLAYSCPGIVSIYILIRDKKGSNTEERMR-KYLDQPIF 336
F+ G+S+ ITG+TGFLGK VEK+ P + +Y+L+R + R++ + + IF
Sbjct: 9 FFRGRSILITGSTGFLGKVLVEKILRVQPDVKKLYLLVRANDVESATRRVQDEVTGKEIF 68
Query: 337 SRIKYEHPEYF-----KKIIPISGDITAPKLGL 420
+K +H + F +K+ ++GDI LGL
Sbjct: 69 QVLKEKHGDGFESFVEEKVCTLAGDIIYENLGL 101
>04_03_0545 +
16996340-16996418,16998039-16998142,16999796-16999995,
17000186-17000228
Length = 141
Score = 57.2 bits (132), Expect = 6e-09
Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Frame = +1
Query: 148 TVREFYDGKSVFITGATGFLGKAYVEKLAYSCPGIVSIYILIRDKKGSNTEER-MRKYLD 324
++ E + +S+ ITG+TGFL K VEK+ P + +Y+L+R + +ER + + +
Sbjct: 5 SIAERFRDRSILITGSTGFLAKMLVEKILRIQPDVRKLYLLVRAPDAAAAKERLLTEVVG 64
Query: 325 QPIFSRIKYEHPEYF-----KKIIPISGDITAPKLGLCDEE 432
+ +F ++ +H F +K+ P+ GDIT GL + E
Sbjct: 65 KGLFDVLREQHGASFHSFIKEKVCPLPGDITHQNFGLGNSE 105
>04_03_0539 +
16892822-16892900,16894004-16894107,16894718-16894917,
16896078-16896178,16897546-16897735,16898377-16898458,
16899374-16899501,16899846-16900026
Length = 354
Score = 52.8 bits (121), Expect = 1e-07
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Frame = +1
Query: 151 VREFYDGKSVFITGATGFLGKAYVEKLAYSCPGIVSIYILIRDKKGSNTEER-MRKYLDQ 327
+ E + K++ ITGATGFLGK VEK+ P + +Y+L+R EER + + +
Sbjct: 6 IAERFRDKTILITGATGFLGKLLVEKILRVQPEVRKLYLLVRAPDAIAAEERVLTEVVGN 65
Query: 328 PIFSRIKYEHPEYF-----KKIIPISGDITAPKLGL 420
+F ++ ++ F +KI + GD+T GL
Sbjct: 66 GLFDVLREQYGAGFHSFIKEKIYALPGDVTHENFGL 101
>04_03_0543 +
16955440-16955518,16956623-16956726,16957456-16957655,
16958554-16958654,16959408-16959603,16960243-16960324,
16960402-16960668,16960790-16960917,16961285-16961465
Length = 445
Score = 50.8 bits (116), Expect = 5e-07
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Frame = +1
Query: 151 VREFYDGKSVFITGATGFLGKAYVEKLAYSCPGIVSIYILIRDKKGSNTEER-MRKYLDQ 327
+ E + K++ ITGATGFLGK VEK+ P + +Y+L+R EER + + + +
Sbjct: 6 IAERFRDKTILITGATGFLGKLLVEKILRVQPEVRKLYLLVRAPDAIAAEERVLTEVVGK 65
Query: 328 PIFSRIKYEHPEYF-----KKIIPISGDITAPKLGL 420
+F ++ ++ F +KI + GD+ GL
Sbjct: 66 GLFDVLREQYGAGFNSFIKEKIYALPGDVMHENFGL 101
>07_03_0076 - 13123676-13123720,13124611-13124714,13124813-13124891
Length = 75
Score = 44.0 bits (99), Expect = 6e-05
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = +1
Query: 151 VREFYDGKSVFITGATGFLGKAYVEKLAYSCPGIVSIYILIR 276
V E + ++V ITGATGF+ K VEK+ PG+ +Y+L+R
Sbjct: 6 VAERFHSRTVLITGATGFIAKLLVEKILRLQPGVKRLYLLVR 47
>03_02_0550 +
9407280-9407375,9407474-9407560,9408230-9408317,
9408871-9408962,9409068-9409132,9409220-9409308,
9409402-9409479,9409567-9409660,9409745-9409811,
9409907-9409970,9410096-9410136,9410221-9410412
Length = 350
Score = 30.3 bits (65), Expect = 0.74
Identities = 13/59 (22%), Positives = 32/59 (54%)
Frame = +1
Query: 178 VFITGATGFLGKAYVEKLAYSCPGIVSIYILIRDKKGSNTEERMRKYLDQPIFSRIKYE 354
+ +TG GF+G V+KL + +++ D + +++ ++K++ P F I+++
Sbjct: 37 ILVTGGAGFIGSHLVDKLMEN----EKHEVIVADNFFTGSKDNLKKWIGHPRFELIRHD 91
>03_06_0464 +
34126930-34127065,34127149-34127333,34127444-34127632,
34128309-34128471,34129046-34129232,34129467-34129611
Length = 334
Score = 29.1 bits (62), Expect = 1.7
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 166 DGKSVFITGATGFLGKAYVEKL 231
+G++V +TGA+GF+G V +L
Sbjct: 10 EGETVLVTGASGFIGSCLVRRL 31
>02_05_1360 +
35942493-35942682,35942799-35942858,35943099-35943217,
35945405-35945449,35945598-35945676,35945777-35945838,
35945932-35946037,35946193-35946253,35947097-35947167,
35947459-35947598,35947887-35947994
Length = 346
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 175 SVFITGATGFLGKAYVEKL 231
+V ITGATGF+G+ V+KL
Sbjct: 43 TVSITGATGFVGRRLVQKL 61
>06_03_0618 +
22798419-22798588,22798672-22798771,22798891-22798971,
22799131-22799180,22799302-22799452,22800027-22800083,
22800171-22800292,22800397-22800601
Length = 311
Score = 27.9 bits (59), Expect = 3.9
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 166 DGKSVFITGATGFLGKAYVEKLAYSCPGIVSIYILIRDKKGSNT 297
DGK+ +TGA +G A E LA ++Y+L R+K+ T
Sbjct: 33 DGKNCLVTGANSGIGFATAEGLASRG---ATVYMLCRNKERGET 73
>02_05_0701 +
31022485-31022648,31023569-31023611,31023712-31023777,
31024007-31024062,31024091-31024190,31024290-31024472,
31024953-31025001,31025089-31025169,31025209-31025268,
31025394-31025514,31025612-31025693,31025783-31025868,
31026011-31026111,31026246-31026387,31026488-31026638,
31026710-31026937
Length = 570
Score = 27.9 bits (59), Expect = 3.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 260 MLTMPGHEYASFSTYAFPRNPVAPVIKT 177
+L M H Y ++ TYAFP + + P+ K+
Sbjct: 52 VLEMFYHAYDNYMTYAFPHDELKPLTKS 79
>12_02_0973 + 24959440-24959451,24959962-24962195,24962539-24962653,
24963146-24963943,24964140-24964422,24964500-24964951,
24965744-24965870,24965950-24966074,24966188-24966858,
24966976-24967093,24967177-24967293,24967564-24967658,
24968152-24968303,24968858-24968913,24969001-24969218,
24969842-24970239,24970345-24970628,24970730-24970836,
24970882-24970968,24971729-24971990,24972228-24972503,
24973197-24973254,24973437-24973756,24973889-24973999,
24974183-24974350,24974494-24974622,24974731-24974820,
24974934-24975040,24975133-24975281,24975584-24975666,
24975749-24975844,24975957-24976079,24976180-24976263,
24976371-24976511,24976652-24976951,24977386-24977453,
24977540-24977642,24979363-24979524,24979613-24981230,
24981270-24981661,24981689-24981991,24982078-24982161,
24982296-24982448,24982678-24982841,24982915-24983062,
24983209-24983331,24983409-24983496,24983686-24983867
Length = 4177
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 324 IKIFSHSLFSVRPFLVSNQNVNAYYARTRI 235
I +F LFS P VS Q+ + +RTR+
Sbjct: 1733 ISLFKEGLFSTAPINVSLQDSGVFASRTRV 1762
>06_02_0338 -
14723277-14723444,14724564-14724836,14735044-14735160,
14735276-14735593
Length = 291
Score = 27.5 bits (58), Expect = 5.2
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 175 SVFITGATGFLGKAYVEKLAYSCPGIVS 258
+VF+ G+TG GK VEKL G+V+
Sbjct: 59 TVFVAGSTGRTGKRVVEKLLERGFGVVA 86
>03_02_0500 -
8915300-8915349,8915567-8915717,8916308-8916516,
8916592-8916808,8917515-8917722,8917839-8917939
Length = 311
Score = 27.1 bits (57), Expect = 6.9
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 169 GKSVFITGATGFLGKAYVEKLA 234
GK+ +TG T +G+A VE+LA
Sbjct: 21 GKTALVTGGTRGIGRAVVEELA 42
>03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484
Length = 663
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 163 YDGKSVFITGATGFLGKAYVEKLAYSCP 246
Y+ K++ ITGA GF+ +L + P
Sbjct: 4 YEPKNILITGAAGFIASHVANRLVRNYP 31
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,413,574
Number of Sequences: 37544
Number of extensions: 216708
Number of successful extensions: 544
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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