Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0027
(571 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.70
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.70
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 1.6
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 1.6
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 2.8
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 2.8
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 2.8
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 2.8
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 2.8
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 2.8
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 2.8
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 2.8
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 23 2.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 2.8
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 6.5
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 8.6
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 8.6
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.70
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 405 ACICVRSDAETEVLLVTSSRRPDNW 479
+CICVR AE +L S++ ++W
Sbjct: 487 SCICVRFIAEHTKMLEDSTKVKEDW 511
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.70
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 405 ACICVRSDAETEVLLVTSSRRPDNW 479
+CICVR AE +L S++ ++W
Sbjct: 487 SCICVRFIAEHTKMLEDSTKVKEDW 511
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 1.6
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -1
Query: 211 LCRTYPFSTIKLHNVHKKSNYNNN 140
L Y +S +N + +NYNNN
Sbjct: 85 LSNNYKYSNYNNYNNNYNNNYNNN 108
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 1.6
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -1
Query: 211 LCRTYPFSTIKLHNVHKKSNYNNN 140
L Y +S +N + +NYNNN
Sbjct: 85 LSNNYKYSNYNNYNNNYNNNYNNN 108
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 178 LHNVHKKSNYNNN 140
+HN + K NYNNN
Sbjct: 89 IHNNNYKYNYNNN 101
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 178 LHNVHKKSNYNNN 140
+HN + K NYNNN
Sbjct: 89 IHNNNYKYNYNNN 101
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 178 LHNVHKKSNYNNN 140
+HN + K NYNNN
Sbjct: 90 IHNNNYKYNYNNN 102
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 178 LHNVHKKSNYNNN 140
+HN + K NYNNN
Sbjct: 90 IHNNNYKYNYNNN 102
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 178 LHNVHKKSNYNNN 140
+HN + K NYNNN
Sbjct: 90 IHNNNYKYNYNNN 102
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 178 LHNVHKKSNYNNN 140
+HN + K NYNNN
Sbjct: 90 IHNNNYKYNYNNN 102
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 190 STIKLHNVHKKSNYNNN 140
S++ +H +NYNNN
Sbjct: 83 SSLSNKTIHNNNNYNNN 99
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.6 bits (46), Expect = 2.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 190 STIKLHNVHKKSNYNNN 140
S++ +H +NYNNN
Sbjct: 83 SSLSNKTIHNNNNYNNN 99
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 22.6 bits (46), Expect = 2.8
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +2
Query: 341 NGKGEA*FDKDI*RRGF*ATGGMYLRAFRCRNRGPAGDVFETAR 472
NG+ EA + K + + LRA+ C G GD+ T +
Sbjct: 46 NGEEEAYYRKHLLKDADGRVSCPVLRAYTCPICGACGDIAHTVK 89
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 2.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 190 STIKLHNVHKKSNYNNN 140
S++ +H +NYNNN
Sbjct: 316 SSLSNKTIHNNNNYNNN 332
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 187 TIKLHNVHKKSNYNNN 140
TI +N + +NYNNN
Sbjct: 322 TIHNNNNYNNNNYNNN 337
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 6.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 178 LHNVHKKSNYNNNK 137
+HN + +NYNN K
Sbjct: 312 IHNNNNYNNYNNKK 325
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 175 HNVHKKSNYNNN 140
+N + K NYNNN
Sbjct: 98 YNYNNKYNYNNN 109
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -1
Query: 220 RCILCRTYPFSTIKLHNVHKKSNYNN 143
R ++ R P+ST + + + S Y N
Sbjct: 360 RLLMMRRTPYSTPEYDDTYMDSGYTN 385
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,112
Number of Sequences: 438
Number of extensions: 2811
Number of successful extensions: 27
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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