Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0026
         (343 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    24   1.8  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   4.1  
CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein ...    22   5.5  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    21   9.6  

>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 16/47 (34%), Positives = 19/47 (40%)
 Frame = -3

Query: 311 LDIDRLLRHPAAV*IHSHNHRTWVYYPLPVPVSVQLTPLVARALRPS 171
           +D DR    P A    SH      YYP  +P   Q  P V    +PS
Sbjct: 349 VDYDRPTSRPVASGPTSH------YYPSHIPAGSQPVPAVVNPQQPS 389


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 98   PRPAVRSSCRGLRSCLVPNSCSP 30
            P PAV  + + L + ++PNS  P
Sbjct: 1105 PAPAVEPAKKTLVATILPNSAKP 1127


>CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein
           protein.
          Length = 207

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -1

Query: 169 CARKKPLDGLVVVAVAARYVTG-ADHGRL*EVLAEDYDRA 53
           CA+ +  D  +++A+AA+Y      + R  +V +E  D A
Sbjct: 139 CAKSQVYDDRILMAIAAQYQCAVVSNDRFRDVASEHPDWA 178


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -3

Query: 245 WVYYPLPVPVSVQLTPLVARALRPSVRSKEASGRPGGCCRRCSIC 111
           +V+  L    +V  T   ARA + S ++KEA  +  G   + S C
Sbjct: 295 FVFAALLEYAAVNYTYWGARAKKKSKKNKEAERKVFGKTEKTSTC 339


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 340,226
Number of Sequences: 2352
Number of extensions: 6852
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24075240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)